Cp4.1LG17g04430.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCAAATTCTAAAGTCTATACTTTCGATGAAGTTGCAAAGCACAACCACGAGAAAGATTGCTGGCTTATCATCTCTGGTTATGTATGTTCCTTTTTTGTTTTAATTTTTTAAAAAATTCATTAATTTCGATTAAAATAAACCGATTGTTTGATAACTGTTTTTTAAGTTTACGGGTATTTCTATAACATTATCAAGATTTTGAGATTTTGATGAAATGCAACATGTTACTGTAACAAATCAGCTCGTTAGTAGCAATAAAGACTTTAAATTAAATATTTAGTTTAAATACTATTAAATTTCATTCTACGTTTCTTTTTTATATCTTGTTTTCTATTTTCTATTTATTATTTTTTTGAGATATATTTCTAATCTCTAGATGTTGATTTAGGTGTATGATGTAACTTCTTATTTACCGGATCACCCAGGTGGCGGTGAGCTTTTGGTATTGGCTGTGGGTAAGATGCTGTTGCATTCGTTTACTATCTTAACCAAAATATATCTTTTTAATAAATAGTTTTTTTCGTGGAAAAAATATCGGACAGTAATACAAAGATTTTGAGCATGGAACTTATATAACATATTTGAATTTGCAGAAAAAGATGCGACATTTGATTTTAAGAGTGTCGGACATAGTGAAACAGCTCAAGAGAGGATGAAAAAGTATCAGATAGGTAAAATCGACCCGTTGACTCTCCCGACGGAACAGAAACACGTGGAAACTACTCCACACAAACCAACTAAGAGTCTACTTTCCTTTTCGCCTTTACATGTTCTAATTCCCCTATTGCTCTTCGTGTTGGCTATTGCTTTTCCCTATTTGAAAATTAAGGCCTAA ATGGATTCAAATTCTAAAGTCTATACTTTCGATGAAGTTGCAAAGCACAACCACGAGAAAGATTGCTGGCTTATCATCTCTGGTTATGTGTATGATGTAACTTCTTATTTACCGGATCACCCAGGTGGCGGTGAGCTTTTGGTATTGGCTGTGGAAAAAGATGCGACATTTGATTTTAAGAGTGTCGGACATAGTGAAACAGCTCAAGAGAGGATGAAAAAGTATCAGATAGGTAAAATCGACCCGTTGACTCTCCCGACGGAACAGAAACACGTGGAAACTACTCCACACAAACCAACTAAGAGTCTACTTTCCTTTTCGCCTTTACATGTTCTAATTCCCCTATTGCTCTTCGTGTTGGCTATTGCTTTTCCCTATTTGAAAATTAAGGCCTAA ATGGATTCAAATTCTAAAGTCTATACTTTCGATGAAGTTGCAAAGCACAACCACGAGAAAGATTGCTGGCTTATCATCTCTGGTTATGTGTATGATGTAACTTCTTATTTACCGGATCACCCAGGTGGCGGTGAGCTTTTGGTATTGGCTGTGGAAAAAGATGCGACATTTGATTTTAAGAGTGTCGGACATAGTGAAACAGCTCAAGAGAGGATGAAAAAGTATCAGATAGGTAAAATCGACCCGTTGACTCTCCCGACGGAACAGAAACACGTGGAAACTACTCCACACAAACCAACTAAGAGTCTACTTTCCTTTTCGCCTTTACATGTTCTAATTCCCCTATTGCTCTTCGTGTTGGCTATTGCTTTTCCCTATTTGAAAATTAAGGCCTAA MDSNSKVYTFDEVAKHNHEKDCWLIISGYVYDVTSYLPDHPGGGELLVLAVEKDATFDFKSVGHSETAQERMKKYQIGKIDPLTLPTEQKHVETTPHKPTKSLLSFSPLHVLIPLLLFVLAIAFPYLKIKA
BLAST of Cp4.1LG17g04430.1 vs. Swiss-Prot
Match: CYB5E_ARATH (Cytochrome b5 isoform E OS=Arabidopsis thaliana GN=CYTB5-E PE=1 SV=2) HSP 1 Score: 115.2 bits (287), Expect = 5.6e-25 Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. Swiss-Prot
Match: CYB5S_TOBAC (Cytochrome b5, seed isoform OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.5e-25 Identity = 61/129 (47.29%), Postives = 85/129 (65.89%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. Swiss-Prot
Match: CYB5_TOBAC (Cytochrome b5 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 114.4 bits (285), Expect = 9.5e-25 Identity = 60/129 (46.51%), Postives = 84/129 (65.12%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. Swiss-Prot
Match: CYB5_BRAOB (Cytochrome b5 OS=Brassica oleracea var. botrytis GN=CYB5 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24 Identity = 60/127 (47.24%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. Swiss-Prot
Match: CYB5B_ARATH (Cytochrome b5 isoform B OS=Arabidopsis thaliana GN=CYTB5-B PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 3.6e-24 Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TrEMBL
Match: A0A0A0KA20_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G107940 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 1.4e-51 Identity = 100/131 (76.34%), Postives = 115/131 (87.79%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TrEMBL
Match: M5X125_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013234mg PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.8e-30 Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TrEMBL
Match: W9RDL9_9ROSA (Cytochrome b5, seed isoform OS=Morus notabilis GN=L484_023457 PE=3 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 5.8e-29 Identity = 69/130 (53.08%), Postives = 92/130 (70.77%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TrEMBL
Match: A0A151TY23_CAJCA (Cytochrome b5 isoform 1 OS=Cajanus cajan GN=KK1_011257 PE=3 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 1.3e-28 Identity = 67/131 (51.15%), Postives = 86/131 (65.65%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TrEMBL
Match: A0A151SWJ2_CAJCA (Cytochrome b5 OS=Cajanus cajan GN=KK1_014582 PE=3 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.3e-28 Identity = 66/134 (49.25%), Postives = 87/134 (64.93%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TAIR10
Match: AT5G53560.1 (AT5G53560.1 cytochrome B5 isoform E) HSP 1 Score: 115.2 bits (287), Expect = 3.1e-26 Identity = 60/127 (47.24%), Postives = 84/127 (66.14%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TAIR10
Match: AT2G32720.1 (AT2G32720.1 cytochrome B5 isoform B) HSP 1 Score: 112.5 bits (280), Expect = 2.0e-25 Identity = 55/127 (43.31%), Postives = 83/127 (65.35%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TAIR10
Match: AT5G48810.1 (AT5G48810.1 cytochrome B5 isoform D) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24 Identity = 56/131 (42.75%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TAIR10
Match: AT2G46650.1 (AT2G46650.1 cytochrome B5 isoform C) HSP 1 Score: 100.1 bits (248), Expect = 1.0e-21 Identity = 51/131 (38.93%), Postives = 80/131 (61.07%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. TAIR10
Match: AT1G26340.1 (AT1G26340.1 cytochrome B5 isoform A) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-21 Identity = 49/130 (37.69%), Postives = 82/130 (63.08%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. NCBI nr
Match: gi|659119599|ref|XP_008459741.1| (PREDICTED: cytochrome b5 isoform A-like [Cucumis melo]) HSP 1 Score: 218.4 bits (555), Expect = 7.5e-54 Identity = 103/131 (78.63%), Postives = 118/131 (90.08%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. NCBI nr
Match: gi|449445483|ref|XP_004140502.1| (PREDICTED: cytochrome b5 isoform E-like [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 2.0e-51 Identity = 100/131 (76.34%), Postives = 115/131 (87.79%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. NCBI nr
Match: gi|596010726|ref|XP_007218583.1| (hypothetical protein PRUPE_ppa013234mg [Prunus persica]) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30 Identity = 70/129 (54.26%), Postives = 91/129 (70.54%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. NCBI nr
Match: gi|645254539|ref|XP_008233085.1| (PREDICTED: cytochrome b5-like [Prunus mume]) HSP 1 Score: 138.3 bits (347), Expect = 9.8e-30 Identity = 69/129 (53.49%), Postives = 90/129 (69.77%), Query Frame = 1
BLAST of Cp4.1LG17g04430.1 vs. NCBI nr
Match: gi|694400730|ref|XP_009375446.1| (PREDICTED: cytochrome b5-like [Pyrus x bretschneideri]) HSP 1 Score: 137.1 bits (344), Expect = 2.2e-29 Identity = 70/133 (52.63%), Postives = 90/133 (67.67%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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