Cp4.1LG14g03550.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAGGAGTCTGAGCGTTCAACTCGTGTCGAAATCGGCGTCGGATCGCCTTCTCGGCAAGTTTTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTCTGGATTCGCCGGTTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACCTGTTTCGGAGTAAGTGCTCTCACGATCTCATTGTGATTTACGTAGTGACTGCTCTGTTTCGTTTTATTGTTTTCGAAATCGATTCGCTCTAATGTGAAAGAACCTGCAGTAGATTCAGGATTGTTTGAGAAATCGTGAAATCATTGCGTTTTATGCTTGAAACTTGAAACAAACGTATTCGCAGAGAGTTTTTATTCAAGCGAACGAGAAATCGAAGAGAAAAGGAAACAGAAAAACTATATTTACTTACTCATAATTGTCGAAGTAAAGAATTAGAATCATACATAAACCGCTATTGTCTACTTATTGATTATAAGCATGATTTTCATTTTCAGCCTACAAATACGAACTTCAAAAGTGTATGAGCTTACTTGTAGATATCCGCTGTGGTTATATGCATATGAGTGTGGAAGTTATCTCGTTATTGTTGTTTGATTCTAGTTGGAAATTTCTGGTGTTTATTGCAGGGATTTTGGTGTTCTTGGAATCATTGATTCCACCTTACAACTTTTGAGCAATTATCTCCCATTATGATCCGCGATTCAAAATGATTCGGGAAAAAAAAAAGAAGAAAGAAGAGAAATTAGGCTTCTCTTATGAGTTTCTGTTAATTGTTTTCTTACCATTGAAGGAAGAAAAAGAAGAAATCAAAATTCACGAATCTTATAATTTTACTTCCATTTGTCAGAAGTATGGAAAACATGAAGAATATTCACATTCTTTGGCTTCTCATTTTGGCACCGCAGAATTTGAATTTGGTATATACAGTTGTCCTTCGATCTCAGACATGCTCAGTACTGTTGCAACTGCAAGGGGGGGATGTTTAAAGCAGAAGAACGAAAGGGAGATTCAGAAAACTCTGCAATTGTCTGGGCAGGTAAGGCCAGAATATCTGCCTTTGCTTTTTGGTTAAGCTAAAGCACATTCGGAACAGCCACCTACCTACACCATGCACTGCTTTTTGCTTTTTCTTCTGATTATAATCCTCCTTTTGTCTATTGTAAGCTTGGATTAGATTCCTTTCAATTCGTACTCTTTTCGTTCCTCATACATATTCATACATAAAATGTTCACTAGTGCTGTTGGTGAGTAGCTAGATTAGGCTTACTTTTGTGCTCTCTGATGTCCTTGAATTCGATTCCCAAATTGTTACACACCCATTCGGACACTTTCTTTGGGCAAGGTTTATTAGATTTCACGATAAGAACCTTCCCATGCTTCCACCTAACTGTGATTCATATTGTGGAGCTAAAACTCCAATATATTTCTTTTAGGTAACCGAGTATGAACGAGAAAATGGCAAAGAAATGCAGTTAAAAGATAACATGTTTAATAGAAATGGTTCTCTAAAACCAGCTGTTCAACGTAAGTCCTCTCAAAGGAAGAAAAGGCATCCAGTGTTGTTACAAATTGAAAATTTGAACTCGAAAAGCTATAAACACGGTAGCTTGCTCTCCTAA ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAGGAGTCTGAGCGTTCAACTCGTGTCGAAATCGGCGTCGGATCGCCTTCTCGGCAAGTTTTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTCTGGATTCGCCGGTTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACCTGTTTCGGAAAGTATGGAAAACATGAAGAATATTCACATTCTTTGGCTTCTCATTTTGGCACCGCAGAATTTGAATTTGGTATATACAGTTGTCCTTCGATCTCAGACATGCTCAGTACTGTTGCAACTGCAAGGGGGGGATGTTTAAAGCAGAAGAACGAAAGGGAGATTCAGAAAACTCTGCAATTGTCTGGGCAGGTAACCGAGTATGAACGAGAAAATGGCAAAGAAATGCAGTTAAAAGATAACATGTTTAATAGAAATGGTTCTCTAAAACCAGCTGTTCAACGTAAGTCCTCTCAAAGGAAGAAAAGGCATCCAGTGTTGTTACAAATTGAAAATTTGAACTCGAAAAGCTATAAACACGGTAGCTTGCTCTCCTAA ATGCCAACCTCTGCCGATTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATTTCTTGATTGCGCTACTCCGAGGAGTCTGAGCGTTCAACTCGTGTCGAAATCGGCGTCGGATCGCCTTCTCGGCAAGTTTTTCGATGCCTCGAAATTCGACTTCGATTACGAACAGAGTAGTTTGTGGTCTCCGCCGATTCCGCGGCGAGTGTTTCTGGATTCGCCGGTTGATGTTTGCTCTGGTTATGAGGTTCTCTCGAAGCTTGAGAATGCGAAGAAGGCATGGAGGAAACTTATAACCTGTTTCGGAAAGTATGGAAAACATGAAGAATATTCACATTCTTTGGCTTCTCATTTTGGCACCGCAGAATTTGAATTTGGTATATACAGTTGTCCTTCGATCTCAGACATGCTCAGTACTGTTGCAACTGCAAGGGGGGGATGTTTAAAGCAGAAGAACGAAAGGGAGATTCAGAAAACTCTGCAATTGTCTGGGCAGGTAACCGAGTATGAACGAGAAAATGGCAAAGAAATGCAGTTAAAAGATAACATGTTTAATAGAAATGGTTCTCTAAAACCAGCTGTTCAACGTAAGTCCTCTCAAAGGAAGAAAAGGCATCCAGTGTTGTTACAAATTGAAAATTTGAACTCGAAAAGCTATAAACACGGTAGCTTGCTCTCCTAA MPTSADSSSSSSSSSSSSSSSSSFLDCATPRSLSVQLVSKSASDRLLGKFFDASKFDFDYEQSSLWSPPIPRRVFLDSPVDVCSGYEVLSKLENAKKAWRKLITCFGKYGKHEEYSHSLASHFGTAEFEFGIYSCPSISDMLSTVATARGGCLKQKNEREIQKTLQLSGQVTEYERENGKEMQLKDNMFNRNGSLKPAVQRKSSQRKKRHPVLLQIENLNSKSYKHGSLLS
BLAST of Cp4.1LG14g03550.1 vs. TrEMBL
Match: A0A0A0KVF5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G082960 PE=4 SV=1) HSP 1 Score: 138.7 bits (348), Expect = 9.2e-30 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. TrEMBL
Match: A0A067KFA4_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10567 PE=4 SV=1) HSP 1 Score: 104.8 bits (260), Expect = 1.5e-19 Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. TrEMBL
Match: A0A067DQ60_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036709mg PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17 Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. TrEMBL
Match: V4T630_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022947mg PE=4 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.1e-17 Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. TrEMBL
Match: A0A061F9F8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_031878 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17 Identity = 60/100 (60.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. NCBI nr
Match: gi|700198412|gb|KGN53570.1| (hypothetical protein Csa_4G082960 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29 Identity = 75/95 (78.95%), Postives = 80/95 (84.21%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. NCBI nr
Match: gi|643725940|gb|KDP34787.1| (hypothetical protein JCGZ_10567 [Jatropha curcas]) HSP 1 Score: 104.8 bits (260), Expect = 2.1e-19 Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. NCBI nr
Match: gi|567899920|ref|XP_006442448.1| (hypothetical protein CICLE_v10022947mg [Citrus clementina]) HSP 1 Score: 98.6 bits (244), Expect = 1.5e-17 Identity = 58/103 (56.31%), Postives = 72/103 (69.90%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. NCBI nr
Match: gi|590610430|ref|XP_007021812.1| (Uncharacterized protein TCM_031878 [Theobroma cacao]) HSP 1 Score: 98.2 bits (243), Expect = 2.0e-17 Identity = 60/100 (60.00%), Postives = 70/100 (70.00%), Query Frame = 1
BLAST of Cp4.1LG14g03550.1 vs. NCBI nr
Match: gi|731431929|ref|XP_010644110.1| (PREDICTED: uncharacterized protein LOC104877493 [Vitis vinifera]) HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16 Identity = 64/113 (56.64%), Postives = 76/113 (67.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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