Cp4.1LG12g09600.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g09600.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	RING-H2 finger protein-like protein
Location	Cp4.1LG12 : 5602126 .. 5602935 (+)
Sequence length	810

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

mRNA sequence

ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

Coding sequence (CDS)

ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

Protein sequence

MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS

Homology

[Close]

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot
Match: ATL60_ARATH (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = 1


Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE---- 60
           M+++  S    LF      E  GK+++ +I+ +F  I+F+++LHLY+R    R+++    
Sbjct: 1   MDEESVSN-GSLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNL 60

Query: 61  -----STPNSTGSQRSDQESAVV-------PLWN-GLDAVVLRSLPVVVFSPGDFEEGME 120
                  P ST   R+ +    V       PL N GLD+ +L+S+ VVVF   DF++G+E
Sbjct: 61  NLIQSDDPGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLE 120

Query: 121 CAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAE 171
           CAVCL++L +G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCRN V           S E
Sbjct: 121 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV----------GSVE 176

[Close]

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot
Match: ATL3_ARATH (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-31
Identity = 99/313 (31.63%), Postives = 153/313 (48.88%), Query Frame = 1


Query: 4   DHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE-----ST 63
           D+ S  + +FG     E+T KI++  I++LF+ ++FV+ILHLY++    RID+       
Sbjct: 3   DNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQ 62

Query: 64  PNSTGSQRSDQESAVVPLWN-------------------GLDAVVLRSLPVVVFSPGDFE 123
                 Q  DQ S   P+                     GL +  L SLP+V F     +
Sbjct: 63  QQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCK 122

Query: 124 EGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPV-APKCSYPTE 183
           +G+EC++CL+EL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CRN V  P+ +    
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKR 182

Query: 184 LNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGA 243
           +    D A  +    ++     + + +S     N    G    D  +  +T+  T + GA
Sbjct: 183 VEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQ--DQVSTGNTNVGTQEDGA 242

Query: 244 GAGTGTCFADE---------------------EMKSVVTNK---------LRTLRRLLSR 260
            AG G   + E                      M+ +V  +         LR+LRR LSR
Sbjct: 243 -AGNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSR 302

[Close]

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-26
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1


Query: 21  LTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGL 80
           L GKIM++++++LF+ ++ ++  H Y+RWL  R +        S      ++  P    L
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS--PRDQAL 83

Query: 81  DAVVLRSLPVVVFS---PGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFK 140
           D  VL  +P+ V+S   P   EE  EC+VCL+E  E ++ RLLP+C H FHVDCID WF+
Sbjct: 84  DQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFR 143

Query: 141 SNSTCPLCRNPVAP 152
           S STCPLCR PV P
Sbjct: 144 SRSTCPLCRAPVQP 155

[Close]

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-26
Identity = 95/271 (35.06%), Postives = 130/271 (47.97%), Query Frame = 1


Query: 13  FGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR------ 72
           F GS    ++GKIM++ I+ILF V++ ++ LHLY+RW L R            R      
Sbjct: 18  FSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF 77

Query: 73  --SDQESAV--VPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 132
             +D  +A   V    GLD  V++SLPV  FS    ++ +ECAVCL+E  E E  R+LP 
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPN 137

Query: 133 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME----VSSRRV 192
           C H FHVDCIDMWF S+STCPLCR+ V         L   E  A+    E    V S  V
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLV-------ESLAGIESTAAAREREVVIAVDSDPV 197

Query: 193 CLEQAQTSSSSTANTRAEG---MVVIDIPNMPSTSTSTADAGAGAGTGTCFADE------ 252
            + +  +SS  T      G   M+  D    P      A       T + F DE      
Sbjct: 198 LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKP------AAIEVPRRTFSEFEDELTRRDS 257

Query: 253 ----EMKSVVTNKLRTLRRLLSRERRIGNNP 257
                 +S ++  L +  R+LSR+RR  ++P
Sbjct: 258 PASQSFRSPMSRML-SFTRMLSRDRRSASSP 274

[Close]

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-24
Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 1


Query: 15  GSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVV 74
           GS    L GKIM+A+++ILF+ ++ ++  H Y+RWL  R +        +      +A  
Sbjct: 18  GSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARD 77

Query: 75  PLWNG-----LDAVVLRSLPVVVFSPGDFEEGME-CAVCLTELGEGEKARLLPRCNHGFH 134
           P  +      LD  VL  +P+ V+S    E  +E C+VCL+E  E ++ R+LP+C H FH
Sbjct: 78  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 137

Query: 135 VDCIDMWFKSNSTCPLCRNPVAP----------KCSYPTELNSAEDLASGSSMEVSSRRV 194
           VDCID WF+S S+CPLCR PV P             +P+ +   ED  +GSS        
Sbjct: 138 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPS-VKPIEDTEAGSSSSSDES-- 197

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL
Match: A0A0A0K6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447970 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 175/284 (61.62%), Postives = 204/284 (71.83%), Query Frame = 1


Query: 3   QDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNST 62
           ++ AS I+  FG S AMELTGKIM+A ILIL LVI FV++L LYSRW LSR+ +S+ +S 
Sbjct: 2   EEQASTISHPFGDSIAMELTGKIMLAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSA 61

Query: 63  GSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 122
            +Q S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPR
Sbjct: 62  TNQESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPR 121

Query: 123 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME---------- 182
           CNHGFHVDCIDMWFKSNSTCPLCRNPVA      TE NS ++  +GSSME          
Sbjct: 122 CNHGFHVDCIDMWFKSNSTCPLCRNPVA-----ITEPNSEQNPETGSSMESPIFPTNVLF 181

Query: 183 ------VSSRRVCLEQAQ-TSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTC 242
                 VSSR VCLE+ Q +SSSS+ ++    MVVIDIPN PSTS          G GTC
Sbjct: 182 WGNQMQVSSRGVCLEEPQISSSSSSTSSSINTMVVIDIPNEPSTS----------GAGTC 241

Query: 243 FADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           FADEEM SVVTN+LRTL+RLLSRERRIG NP  SD+EQEG+ QS
Sbjct: 242 FADEEMGSVVTNRLRTLKRLLSRERRIGTNPIPSDIEQEGIVQS 267

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL
Match: M5XD68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010059mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52
Identity = 127/279 (45.52%), Postives = 180/279 (64.52%), Query Frame = 1


Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPN 60
           M    +S   +    S A++LTGKIM+  +L+LFLV+VFV+ LHLY++W   R D+ T  
Sbjct: 1   MTMGESSPFGRTLDDSNAVQLTGKIMMIAVLVLFLVVVFVLCLHLYAKWYWWRADDDTSA 60

Query: 61  STGSQRSDQ-------ESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGE 120
           +  S+R  +       +  V  +  GLD +VL+SLPV+VF   DF++G+ECAVCL+EL +
Sbjct: 61  NNQSRRRRRRFVFAPGQDTVATVRKGLDPLVLKSLPVLVFPSEDFKDGLECAVCLSELVQ 120

Query: 121 GEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-ELNSAEDLASGSSME 180
           GEKARLLP+C+HGFHVDCIDMWF+S+STCP+CRNPVAP+ S  +    S+  LA   S++
Sbjct: 121 GEKARLLPKCSHGFHVDCIDMWFQSHSTCPICRNPVAPESSVDSGAAGSSSALAESDSVQ 180

Query: 181 VSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMK 240
           +      L  A++ +S       +GM+VIDIP+   TS ++             ADE++K
Sbjct: 181 I------LSPAESLASGP-----DGMLVIDIPSQ--TSLASPSPSPSPSGNRFAADEDLK 240

Query: 241 SVVTNKLRTLRRLLSRERRIGN-NPTSSDLEQ-EGMGQS 270
           S  T +LR+L+RLLSR+RRI   +P+S D+EQ  G GQS
Sbjct: 241 SPATTRLRSLKRLLSRDRRISPCSPSSVDVEQGGGRGQS 266

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL
Match: W9RQG6_9ROSA (RING-H2 finger protein ATL3 OS=Morus notabilis GN=L484_017986 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 135/307 (43.97%), Postives = 184/307 (59.93%), Query Frame = 1


Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR 66
           +R ++    S A+ELTG+IMV  I++ F+V+VFV+ LHLY++W   RI+E    S G Q+
Sbjct: 5   TRFDRSLDDSKAVELTGRIMVVAIIVFFVVVVFVIFLHLYAKWFWWRIEEDAAES-GQQQ 64

Query: 67  S-----------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           S            Q+  V  L  GL+  VLRSLPV+V+   DF+EG+ECAVCL+EL  GE
Sbjct: 65  SRRRRRRFVFAPGQDPTVPALRRGLEPSVLRSLPVLVYRAEDFKEGLECAVCLSELVNGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-------ELNSAEDLAS- 186
           KARLLP+CNHGFHVDCIDMWF+S++TCPLCRN V+P  S  +       E N + D  S 
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHATCPLCRNSVSPVSSSDSTGSENVPEENLSSDYTSG 184

Query: 187 -----------GSSMEVSSRRVCLEQA------------QTSSSSTANTRAEGMVVIDIP 246
                      G   +VSS   CLE+              +SSSS++ TR  G +VIDIP
Sbjct: 185 VPNFPTNVLFWGDETQVSSGNACLEEGPSFQSQPSAVVPSSSSSSSSTTRIVGALVIDIP 244

Query: 247 N-MPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPTSSDLE 270
           N  P+ ++S + +G           +E+KS VT +LR+L+RLLSRER++   +P+S D+E
Sbjct: 245 NENPAAASSLSPSG-----------DELKSPVTTRLRSLKRLLSRERKVSPCSPSSGDIE 299

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL
Match: F6HXK6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00220 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.5e-50
Identity = 127/290 (43.79%), Postives = 176/290 (60.69%), Query Frame = 1


Query: 16  SFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRS-------- 75
           S A+EL+GKIMV  I++LF V+VFV+ LHLY++W   R  +   +  GS+R         
Sbjct: 13  SAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRFVFAP 72

Query: 76  DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGF 135
            Q+ A+  +  GLD  +L S+PV+VF P +F++G+ECAVCL+EL  GEKARLLP+CNHGF
Sbjct: 73  GQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGF 132

Query: 136 HVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLAS-------------------- 195
           HV+CIDMWF+S+STCPLCRN VA   S PT   S E +                      
Sbjct: 133 HVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAGDYSLESPNYPTN 192

Query: 196 ----GSSMEVSSRRVCLEQAQTSSS---STANTRAEGMVVIDIPNMPSTSTSTADAGAGA 255
               G+   V+S  +CLE+   SS    ++     +GM+VIDIP   + + S+     G 
Sbjct: 193 ILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAENFSSLSPSTG- 252

Query: 256 GTGTCFADEEMKSVVTNKLRTLRRLLSRERR-IGNNPTSSDLEQEGMGQS 270
           GT    ++EE+KS +T +LR+L+RLLSRE+R +  +P S D+EQ G GQS
Sbjct: 253 GT----SEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQGGRGQS 297

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL
Match: A5C2P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027500 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 126/290 (43.45%), Postives = 176/290 (60.69%), Query Frame = 1


Query: 16  SFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRS-------- 75
           S A+EL+GKIMV  I++LF V+VFV+ LHLY++W   R  +   +  GS+R         
Sbjct: 13  SAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRFVFAP 72

Query: 76  DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGF 135
            Q+ A+  +  GLD  +L S+PV+VF P +F++G+ECAVCL+EL  GEKARLLP+CNHGF
Sbjct: 73  GQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGF 132

Query: 136 HVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLAS-------------------- 195
           HV+CIDMWF+S+STCPLCRN VA   S PT   S E +                      
Sbjct: 133 HVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAGDYSLESPNYPTN 192

Query: 196 ----GSSMEVSSRRVCLEQAQTSSS---STANTRAEGMVVIDIPNMPSTSTSTADAGAGA 255
               G+   V+S  +CLE+   SS    ++     +GM+VIDIP   + + S+     G 
Sbjct: 193 ILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAENFSSLSPSTG- 252

Query: 256 GTGTCFADEEMKSVVTNKLRTLRRLLSRERR-IGNNPTSSDLEQEGMGQS 270
           GT    ++EE+KS +T +LR+L+RLLSRE+R +  +P S D+EQ G GQ+
Sbjct: 253 GT----SEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQGGRGQN 297

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10
Match: AT1G53820.1 (AT1G53820.1 RING/U-box superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 7.1e-33
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = 1


Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE---- 60
           M+++  S    LF      E  GK+++ +I+ +F  I+F+++LHLY+R    R+++    
Sbjct: 1   MDEESVSN-GSLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNL 60

Query: 61  -----STPNSTGSQRSDQESAVV-------PLWN-GLDAVVLRSLPVVVFSPGDFEEGME 120
                  P ST   R+ +    V       PL N GLD+ +L+S+ VVVF   DF++G+E
Sbjct: 61  NLIQSDDPGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLE 120

Query: 121 CAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAE 171
           CAVCL++L +G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCRN V           S E
Sbjct: 121 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV----------GSVE 176

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10
Match: AT1G72310.1 (AT1G72310.1 RING/U-box superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-32
Identity = 99/313 (31.63%), Postives = 153/313 (48.88%), Query Frame = 1


Query: 4   DHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE-----ST 63
           D+ S  + +FG     E+T KI++  I++LF+ ++FV+ILHLY++    RID+       
Sbjct: 3   DNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQ 62

Query: 64  PNSTGSQRSDQESAVVPLWN-------------------GLDAVVLRSLPVVVFSPGDFE 123
                 Q  DQ S   P+                     GL +  L SLP+V F     +
Sbjct: 63  QQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCK 122

Query: 124 EGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPV-APKCSYPTE 183
           +G+EC++CL+EL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CRN V  P+ +    
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKR 182

Query: 184 LNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGA 243
           +    D A  +    ++     + + +S     N    G    D  +  +T+  T + GA
Sbjct: 183 VEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQ--DQVSTGNTNVGTQEDGA 242

Query: 244 GAGTGTCFADE---------------------EMKSVVTNK---------LRTLRRLLSR 260
            AG G   + E                      M+ +V  +         LR+LRR LSR
Sbjct: 243 -AGNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSR 302

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 95/271 (35.06%), Postives = 130/271 (47.97%), Query Frame = 1


Query: 13  FGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR------ 72
           F GS    ++GKIM++ I+ILF V++ ++ LHLY+RW L R            R      
Sbjct: 18  FSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF 77

Query: 73  --SDQESAV--VPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 132
             +D  +A   V    GLD  V++SLPV  FS    ++ +ECAVCL+E  E E  R+LP 
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPN 137

Query: 133 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME----VSSRRV 192
           C H FHVDCIDMWF S+STCPLCR+ V         L   E  A+    E    V S  V
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLV-------ESLAGIESTAAAREREVVIAVDSDPV 197

Query: 193 CLEQAQTSSSSTANTRAEG---MVVIDIPNMPSTSTSTADAGAGAGTGTCFADE------ 252
            + +  +SS  T      G   M+  D    P      A       T + F DE      
Sbjct: 198 LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKP------AAIEVPRRTFSEFEDELTRRDS 257

Query: 253 ----EMKSVVTNKLRTLRRLLSRERRIGNNP 257
                 +S ++  L +  R+LSR+RR  ++P
Sbjct: 258 PASQSFRSPMSRML-SFTRMLSRDRRSASSP 274

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1


Query: 21  LTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGL 80
           L GKIM++++++LF+ ++ ++  H Y+RWL  R +        S      ++  P    L
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS--PRDQAL 83

Query: 81  DAVVLRSLPVVVFS---PGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFK 140
           D  VL  +P+ V+S   P   EE  EC+VCL+E  E ++ RLLP+C H FHVDCID WF+
Sbjct: 84  DQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFR 143

Query: 141 SNSTCPLCRNPVAP 152
           S STCPLCR PV P
Sbjct: 144 SRSTCPLCRAPVQP 155

[Close]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25
Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 1


Query: 15  GSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVV 74
           GS    L GKIM+A+++ILF+ ++ ++  H Y+RWL  R +        +      +A  
Sbjct: 18  GSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARD 77

Query: 75  PLWNG-----LDAVVLRSLPVVVFSPGDFEEGME-CAVCLTELGEGEKARLLPRCNHGFH 134
           P  +      LD  VL  +P+ V+S    E  +E C+VCL+E  E ++ R+LP+C H FH
Sbjct: 78  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 137

Query: 135 VDCIDMWFKSNSTCPLCRNPVAP----------KCSYPTELNSAEDLASGSSMEVSSRRV 194
           VDCID WF+S S+CPLCR PV P             +P+ +   ED  +GSS        
Sbjct: 138 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPS-VKPIEDTEAGSSSSSDES-- 197

[Close]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr
Match: gi|659124576|ref|XP_008462235.1| (PREDICTED: RING-H2 finger protein ATL60-like [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 5.0e-81
Identity = 175/279 (62.72%), Postives = 203/279 (72.76%), Query Frame = 1


Query: 6   ASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQ 65
           AS IN  FG SFAM+LTGKIM A ILIL LVI FV++L LYSRW LSR+ +S+ +S  +Q
Sbjct: 5   ASTINHPFGDSFAMQLTGKIMFAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSATNQ 64

Query: 66  RSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNH 125
            S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPRCNH
Sbjct: 65  ESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPRCNH 124

Query: 126 GFHVDCIDMWFKSNSTCPLCRNPVA---PKCSYPTELNSAED--------LASGSSMEVS 185
           GFHVDCIDMWFKSNSTCPLCRNPVA   P      E  S+ +        L  G+ M+VS
Sbjct: 125 GFHVDCIDMWFKSNSTCPLCRNPVAITEPNLEQNPETESSTESPIFPTNVLFWGNQMQVS 184

Query: 186 SRRVCLEQAQTSSSSTAN----TRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEE 245
           SR VCLE+ Q SSSS+++    + A  MVVIDIP+ PSTS          G  TCFADEE
Sbjct: 185 SRGVCLEEPQISSSSSSSPSSPSSANAMVVIDIPSQPSTS----------GASTCFADEE 244

Query: 246 MKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           M SVVTN+LRTL+RLLSRERRIGNNP SSD+EQEG+GQS
Sbjct: 245 MGSVVTNRLRTLKRLLSRERRIGNNPISSDIEQEGIGQS 270

[Close]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr
Match: gi|778729519|ref|XP_004141825.2| (PREDICTED: RING-H2 finger protein ATL60 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.6e-79
Identity = 175/284 (61.62%), Postives = 204/284 (71.83%), Query Frame = 1


Query: 3   QDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNST 62
           ++ AS I+  FG S AMELTGKIM+A ILIL LVI FV++L LYSRW LSR+ +S+ +S 
Sbjct: 2   EEQASTISHPFGDSIAMELTGKIMLAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSA 61

Query: 63  GSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 122
            +Q S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPR
Sbjct: 62  TNQESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPR 121

Query: 123 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME---------- 182
           CNHGFHVDCIDMWFKSNSTCPLCRNPVA      TE NS ++  +GSSME          
Sbjct: 122 CNHGFHVDCIDMWFKSNSTCPLCRNPVA-----ITEPNSEQNPETGSSMESPIFPTNVLF 181

Query: 183 ------VSSRRVCLEQAQ-TSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTC 242
                 VSSR VCLE+ Q +SSSS+ ++    MVVIDIPN PSTS          G GTC
Sbjct: 182 WGNQMQVSSRGVCLEEPQISSSSSSTSSSINTMVVIDIPNEPSTS----------GAGTC 241

Query: 243 FADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           FADEEM SVVTN+LRTL+RLLSRERRIG NP  SD+EQEG+ QS
Sbjct: 242 FADEEMGSVVTNRLRTLKRLLSRERRIGTNPIPSDIEQEGIVQS 267

[Close]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr
Match: gi|1009111538|ref|XP_015901416.1| (PREDICTED: RING-H2 finger protein ATL3 [Ziziphus jujuba])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 144/312 (46.15%), Postives = 195/312 (62.50%), Query Frame = 1


Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDEST--PNSTGS 66
           S+ ++ FG S A+ELTGKIMV  I++LF+V+VFV+ LHLY++W   R+D+S   P+   S
Sbjct: 5   SQFSRTFGESRAVELTGKIMVTAIIVLFVVVVFVLFLHLYAKWFWWRVDQSAADPHQQQS 64

Query: 67  QRS---------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           +R           Q+  +  L  GL+  +LRSLPV+V+ P DF++G+ECAVCL+EL +GE
Sbjct: 65  RRRRRSRFVFAPGQDPTIGSLRQGLEPSILRSLPVLVYRPEDFKDGLECAVCLSELVQGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSA----------EDL 186
           KARLLP+CNHGFHVDCIDMWF+S+STCP+CRN VAP+ S   +  +           E+L
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHSTCPICRNAVAPESSDDDDAAAGSAALAGSVHDENL 184

Query: 187 ASGSSME----------------VSSRRVCLEQAQ-----------TSSSSTANTRAEGM 246
           ASG S E                VSS   CLE  +           +SSSS A +R +GM
Sbjct: 185 ASGFSTETPNFPTNVLFWGNQTQVSSGGACLELEEGPSSQPLAPPSSSSSSLATSRPDGM 244

Query: 247 VVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPT 270
           +VIDIP   S+ST +   G        FADE++KS VT +LR+L+RLLSR++RI   +P+
Sbjct: 245 LVIDIPGENSSSTVSPSGGR-------FADEDLKSPVTTRLRSLKRLLSRDKRISPCSPS 304

[Close]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr
Match: gi|595940365|ref|XP_007215821.1| (hypothetical protein PRUPE_ppa010059mg [Prunus persica])

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 127/279 (45.52%), Postives = 180/279 (64.52%), Query Frame = 1


Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPN 60
           M    +S   +    S A++LTGKIM+  +L+LFLV+VFV+ LHLY++W   R D+ T  
Sbjct: 1   MTMGESSPFGRTLDDSNAVQLTGKIMMIAVLVLFLVVVFVLCLHLYAKWYWWRADDDTSA 60

Query: 61  STGSQRSDQ-------ESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGE 120
           +  S+R  +       +  V  +  GLD +VL+SLPV+VF   DF++G+ECAVCL+EL +
Sbjct: 61  NNQSRRRRRRFVFAPGQDTVATVRKGLDPLVLKSLPVLVFPSEDFKDGLECAVCLSELVQ 120

Query: 121 GEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-ELNSAEDLASGSSME 180
           GEKARLLP+C+HGFHVDCIDMWF+S+STCP+CRNPVAP+ S  +    S+  LA   S++
Sbjct: 121 GEKARLLPKCSHGFHVDCIDMWFQSHSTCPICRNPVAPESSVDSGAAGSSSALAESDSVQ 180

Query: 181 VSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMK 240
           +      L  A++ +S       +GM+VIDIP+   TS ++             ADE++K
Sbjct: 181 I------LSPAESLASGP-----DGMLVIDIPSQ--TSLASPSPSPSPSGNRFAADEDLK 240

Query: 241 SVVTNKLRTLRRLLSRERRIGN-NPTSSDLEQ-EGMGQS 270
           S  T +LR+L+RLLSR+RRI   +P+S D+EQ  G GQS
Sbjct: 241 SPATTRLRSLKRLLSRDRRISPCSPSSVDVEQGGGRGQS 266

[Close]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr
Match: gi|703098996|ref|XP_010096533.1| (RING-H2 finger protein ATL3 [Morus notabilis])

HSP 1 Score: 212.6 bits (540), Expect = 8.4e-52
Identity = 135/307 (43.97%), Postives = 184/307 (59.93%), Query Frame = 1


Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR 66
           +R ++    S A+ELTG+IMV  I++ F+V+VFV+ LHLY++W   RI+E    S G Q+
Sbjct: 5   TRFDRSLDDSKAVELTGRIMVVAIIVFFVVVVFVIFLHLYAKWFWWRIEEDAAES-GQQQ 64

Query: 67  S-----------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           S            Q+  V  L  GL+  VLRSLPV+V+   DF+EG+ECAVCL+EL  GE
Sbjct: 65  SRRRRRRFVFAPGQDPTVPALRRGLEPSVLRSLPVLVYRAEDFKEGLECAVCLSELVNGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-------ELNSAEDLAS- 186
           KARLLP+CNHGFHVDCIDMWF+S++TCPLCRN V+P  S  +       E N + D  S 
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHATCPLCRNSVSPVSSSDSTGSENVPEENLSSDYTSG 184

Query: 187 -----------GSSMEVSSRRVCLEQA------------QTSSSSTANTRAEGMVVIDIP 246
                      G   +VSS   CLE+              +SSSS++ TR  G +VIDIP
Sbjct: 185 VPNFPTNVLFWGDETQVSSGNACLEEGPSFQSQPSAVVPSSSSSSSSTTRIVGALVIDIP 244

Query: 247 N-MPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPTSSDLE 270
           N  P+ ++S + +G           +E+KS VT +LR+L+RLLSRER++   +P+S D+E
Sbjct: 245 NENPAAASSLSPSG-----------DELKSPVTTRLRSLKRLLSRERKVSPCSPSSGDIE 299

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g09600.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL60_ARATH	1.3e-31	42.78	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1	[more]
ATL3_ARATH	8.2e-31	31.63	RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1	[more]
ATL64_ARATH	7.9e-26	43.28	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1	[more]
ATL2_ARATH	7.9e-26	35.06	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2	[more]
ATL5_ARATH	5.7e-24	35.71	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1	[more]

BLAST of Cp4.1LG12g09600.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6T2_CUCSA	1.1e-79	61.62	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447970 PE=4 SV=1	[more]
M5XD68_PRUPE	2.6e-52	45.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010059mg PE=4 SV=1	[more]
W9RQG6_9ROSA	5.9e-52	43.97	RING-H2 finger protein ATL3 OS=Morus notabilis GN=L484_017986 PE=4 SV=1	[more]
F6HXK6_VITVI	5.5e-50	43.79	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00220 PE=4 SV=...	[more]
A5C2P4_VITVI	1.2e-49	43.45	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027500 PE=4 SV=1	[more]

BLAST of Cp4.1LG12g09600.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G53820.1	7.1e-33	42.78	RING/U-box superfamily protein	[more]
AT1G72310.1	4.6e-32	31.63	RING/U-box superfamily protein	[more]
AT3G16720.1	4.5e-27	35.06	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	4.5e-27	43.28	RING/U-box superfamily protein	[more]
AT3G62690.1	3.2e-25	35.71	AtL5	[more]

BLAST of Cp4.1LG12g09600.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659124576\|ref\|XP_008462235.1\|	5.0e-81	62.72	PREDICTED: RING-H2 finger protein ATL60-like [Cucumis melo]	[more]
gi\|778729519\|ref\|XP_004141825.2\|	1.6e-79	61.62	PREDICTED: RING-H2 finger protein ATL60 [Cucumis sativus]	[more]
gi\|1009111538\|ref\|XP_015901416.1\|	1.6e-58	46.15	PREDICTED: RING-H2 finger protein ATL3 [Ziziphus jujuba]	[more]
gi\|595940365\|ref\|XP_007215821.1\|	3.8e-52	45.52	hypothetical protein PRUPE_ppa010059mg [Prunus persica]	[more]
gi\|703098996\|ref\|XP_010096533.1\|	8.4e-52	43.97	RING-H2 finger protein ATL3 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG12g09600	Cp4.1LG12g09600	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09600.1:cds:001	Cp4.1LG12g09600.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG12g09600.1	Cp4.1LG12g09600.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 103..146 score: 4.2
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 104..145 score: 3.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 104..146 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 99..149 score: 3.1
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 1..170 score: 8.6
None	No IPR available	PANTHER	PTHR14155:SF99	RING-H2 FINGER PROTEIN ATL3	coord: 1..170 score: 8.6
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 84..153 score: 4.8