Cp4.1LG12g09600 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG12g09600
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRING-H2 finger protein-like protein
LocationCp4.1LG12 : 5602126 .. 5602935 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

mRNA sequence

ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

Coding sequence (CDS)

ATGGAACAAGATCACGCATCGAGGATCAATCAGTTATTCGGAGGCTCATTTGCCATGGAGCTAACGGGGAAGATCATGGTTGCGACCATTTTAATACTCTTTTTGGTCATTGTCTTCGTTATGATTCTCCACCTTTACTCTCGATGGCTCCTGTCCCGCATTGACGAGTCGACACCGAATTCCACTGGTAGTCAGCGGTCTGATCAGGAATCCGCTGTCGTGCCATTGTGGAACGGGCTTGACGCTGTTGTTCTCCGGTCGCTTCCGGTGGTGGTGTTCTCGCCGGGGGATTTCGAAGAGGGGATGGAATGTGCTGTGTGTTTGACGGAGTTGGGTGAGGGTGAGAAGGCTCGGTTGCTTCCGAGGTGCAACCATGGCTTCCATGTGGATTGTATTGACATGTGGTTCAAATCCAACTCTACTTGCCCTCTCTGCAGAAACCCAGTGGCACCCAAATGCTCATATCCCACAGAACTGAACTCTGCAGAGGATTTGGCATCTGGGTCTTCAATGGAGGTCAGTTCAAGACGGGTTTGTTTGGAACAAGCTCAAACTTCATCTTCTTCAACGGCAAACACAAGGGCAGAGGGAATGGTGGTAATTGACATTCCCAACATGCCCTCTACATCTACATCCACCGCTGATGCCGGTGCCGGTGCCGGTACCGGTACCTGTTTCGCCGATGAAGAGATGAAATCAGTTGTTACTAACAAATTGAGAACATTGAGGAGGCTTTTGAGCAGAGAGAGAAGAATTGGCAACAATCCCACTTCCTCAGATCTTGAACAAGAAGGGATGGGGCAGAGTTAA

Protein sequence

MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS
Homology
[Close]
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match: ATL60_ARATH (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-31
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = 1 

Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE---- 60
           M+++  S    LF      E  GK+++ +I+ +F  I+F+++LHLY+R    R+++    
Sbjct: 1   MDEESVSN-GSLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNL 60

Query: 61  -----STPNSTGSQRSDQESAVV-------PLWN-GLDAVVLRSLPVVVFSPGDFEEGME 120
                  P ST   R+ +    V       PL N GLD+ +L+S+ VVVF   DF++G+E
Sbjct: 61  NLIQSDDPGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLE 120

Query: 121 CAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAE 171
           CAVCL++L +G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCRN V           S E
Sbjct: 121 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV----------GSVE 176

[Close]
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match: ATL3_ARATH (RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.2e-31
Identity = 99/313 (31.63%), Postives = 153/313 (48.88%), Query Frame = 1 

Query: 4   DHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE-----ST 63
           D+ S  + +FG     E+T KI++  I++LF+ ++FV+ILHLY++    RID+       
Sbjct: 3   DNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQ 62

Query: 64  PNSTGSQRSDQESAVVPLWN-------------------GLDAVVLRSLPVVVFSPGDFE 123
                 Q  DQ S   P+                     GL +  L SLP+V F     +
Sbjct: 63  QQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCK 122

Query: 124 EGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPV-APKCSYPTE 183
           +G+EC++CL+EL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CRN V  P+ +    
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKR 182

Query: 184 LNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGA 243
           +    D A  +    ++     + + +S     N    G    D  +  +T+  T + GA
Sbjct: 183 VEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQ--DQVSTGNTNVGTQEDGA 242

Query: 244 GAGTGTCFADE---------------------EMKSVVTNK---------LRTLRRLLSR 260
            AG G   + E                      M+ +V  +         LR+LRR LSR
Sbjct: 243 -AGNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSR 302

[Close]
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match: ATL64_ARATH (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-26
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1 

Query: 21  LTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGL 80
           L GKIM++++++LF+ ++ ++  H Y+RWL  R +        S      ++  P    L
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS--PRDQAL 83

Query: 81  DAVVLRSLPVVVFS---PGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFK 140
           D  VL  +P+ V+S   P   EE  EC+VCL+E  E ++ RLLP+C H FHVDCID WF+
Sbjct: 84  DQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFR 143

Query: 141 SNSTCPLCRNPVAP 152
           S STCPLCR PV P
Sbjct: 144 SRSTCPLCRAPVQP 155

[Close]
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match: ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 7.9e-26
Identity = 95/271 (35.06%), Postives = 130/271 (47.97%), Query Frame = 1 

Query: 13  FGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR------ 72
           F GS    ++GKIM++ I+ILF V++ ++ LHLY+RW L R            R      
Sbjct: 18  FSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF 77

Query: 73  --SDQESAV--VPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 132
             +D  +A   V    GLD  V++SLPV  FS    ++ +ECAVCL+E  E E  R+LP 
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPN 137

Query: 133 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME----VSSRRV 192
           C H FHVDCIDMWF S+STCPLCR+ V         L   E  A+    E    V S  V
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLV-------ESLAGIESTAAAREREVVIAVDSDPV 197

Query: 193 CLEQAQTSSSSTANTRAEG---MVVIDIPNMPSTSTSTADAGAGAGTGTCFADE------ 252
            + +  +SS  T      G   M+  D    P      A       T + F DE      
Sbjct: 198 LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKP------AAIEVPRRTFSEFEDELTRRDS 257

Query: 253 ----EMKSVVTNKLRTLRRLLSRERRIGNNP 257
                 +S ++  L +  R+LSR+RR  ++P
Sbjct: 258 PASQSFRSPMSRML-SFTRMLSRDRRSASSP 274

[Close]
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match: ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 5.7e-24
Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 1 

Query: 15  GSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVV 74
           GS    L GKIM+A+++ILF+ ++ ++  H Y+RWL  R +        +      +A  
Sbjct: 18  GSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARD 77

Query: 75  PLWNG-----LDAVVLRSLPVVVFSPGDFEEGME-CAVCLTELGEGEKARLLPRCNHGFH 134
           P  +      LD  VL  +P+ V+S    E  +E C+VCL+E  E ++ R+LP+C H FH
Sbjct: 78  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 137

Query: 135 VDCIDMWFKSNSTCPLCRNPVAP----------KCSYPTELNSAEDLASGSSMEVSSRRV 194
           VDCID WF+S S+CPLCR PV P             +P+ +   ED  +GSS        
Sbjct: 138 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPS-VKPIEDTEAGSSSSSDES-- 197

[Close]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match: A0A0A0K6T2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447970 PE=4 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.1e-79
Identity = 175/284 (61.62%), Postives = 204/284 (71.83%), Query Frame = 1 

Query: 3   QDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNST 62
           ++ AS I+  FG S AMELTGKIM+A ILIL LVI FV++L LYSRW LSR+ +S+ +S 
Sbjct: 2   EEQASTISHPFGDSIAMELTGKIMLAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSA 61

Query: 63  GSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 122
            +Q S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPR
Sbjct: 62  TNQESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPR 121

Query: 123 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME---------- 182
           CNHGFHVDCIDMWFKSNSTCPLCRNPVA      TE NS ++  +GSSME          
Sbjct: 122 CNHGFHVDCIDMWFKSNSTCPLCRNPVA-----ITEPNSEQNPETGSSMESPIFPTNVLF 181

Query: 183 ------VSSRRVCLEQAQ-TSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTC 242
                 VSSR VCLE+ Q +SSSS+ ++    MVVIDIPN PSTS          G GTC
Sbjct: 182 WGNQMQVSSRGVCLEEPQISSSSSSTSSSINTMVVIDIPNEPSTS----------GAGTC 241

Query: 243 FADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           FADEEM SVVTN+LRTL+RLLSRERRIG NP  SD+EQEG+ QS
Sbjct: 242 FADEEMGSVVTNRLRTLKRLLSRERRIGTNPIPSDIEQEGIVQS 267

[Close]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match: M5XD68_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010059mg PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.6e-52
Identity = 127/279 (45.52%), Postives = 180/279 (64.52%), Query Frame = 1 

Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPN 60
           M    +S   +    S A++LTGKIM+  +L+LFLV+VFV+ LHLY++W   R D+ T  
Sbjct: 1   MTMGESSPFGRTLDDSNAVQLTGKIMMIAVLVLFLVVVFVLCLHLYAKWYWWRADDDTSA 60

Query: 61  STGSQRSDQ-------ESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGE 120
           +  S+R  +       +  V  +  GLD +VL+SLPV+VF   DF++G+ECAVCL+EL +
Sbjct: 61  NNQSRRRRRRFVFAPGQDTVATVRKGLDPLVLKSLPVLVFPSEDFKDGLECAVCLSELVQ 120

Query: 121 GEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-ELNSAEDLASGSSME 180
           GEKARLLP+C+HGFHVDCIDMWF+S+STCP+CRNPVAP+ S  +    S+  LA   S++
Sbjct: 121 GEKARLLPKCSHGFHVDCIDMWFQSHSTCPICRNPVAPESSVDSGAAGSSSALAESDSVQ 180

Query: 181 VSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMK 240
           +      L  A++ +S       +GM+VIDIP+   TS ++             ADE++K
Sbjct: 181 I------LSPAESLASGP-----DGMLVIDIPSQ--TSLASPSPSPSPSGNRFAADEDLK 240

Query: 241 SVVTNKLRTLRRLLSRERRIGN-NPTSSDLEQ-EGMGQS 270
           S  T +LR+L+RLLSR+RRI   +P+S D+EQ  G GQS
Sbjct: 241 SPATTRLRSLKRLLSRDRRISPCSPSSVDVEQGGGRGQS 266

[Close]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match: W9RQG6_9ROSA (RING-H2 finger protein ATL3 OS=Morus notabilis GN=L484_017986 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.9e-52
Identity = 135/307 (43.97%), Postives = 184/307 (59.93%), Query Frame = 1 

Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR 66
           +R ++    S A+ELTG+IMV  I++ F+V+VFV+ LHLY++W   RI+E    S G Q+
Sbjct: 5   TRFDRSLDDSKAVELTGRIMVVAIIVFFVVVVFVIFLHLYAKWFWWRIEEDAAES-GQQQ 64

Query: 67  S-----------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           S            Q+  V  L  GL+  VLRSLPV+V+   DF+EG+ECAVCL+EL  GE
Sbjct: 65  SRRRRRRFVFAPGQDPTVPALRRGLEPSVLRSLPVLVYRAEDFKEGLECAVCLSELVNGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-------ELNSAEDLAS- 186
           KARLLP+CNHGFHVDCIDMWF+S++TCPLCRN V+P  S  +       E N + D  S 
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHATCPLCRNSVSPVSSSDSTGSENVPEENLSSDYTSG 184

Query: 187 -----------GSSMEVSSRRVCLEQA------------QTSSSSTANTRAEGMVVIDIP 246
                      G   +VSS   CLE+              +SSSS++ TR  G +VIDIP
Sbjct: 185 VPNFPTNVLFWGDETQVSSGNACLEEGPSFQSQPSAVVPSSSSSSSSTTRIVGALVIDIP 244

Query: 247 N-MPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPTSSDLE 270
           N  P+ ++S + +G           +E+KS VT +LR+L+RLLSRER++   +P+S D+E
Sbjct: 245 NENPAAASSLSPSG-----------DELKSPVTTRLRSLKRLLSRERKVSPCSPSSGDIE 299

[Close]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match: F6HXK6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00220 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 5.5e-50
Identity = 127/290 (43.79%), Postives = 176/290 (60.69%), Query Frame = 1 

Query: 16  SFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRS-------- 75
           S A+EL+GKIMV  I++LF V+VFV+ LHLY++W   R  +   +  GS+R         
Sbjct: 13  SAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRFVFAP 72

Query: 76  DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGF 135
            Q+ A+  +  GLD  +L S+PV+VF P +F++G+ECAVCL+EL  GEKARLLP+CNHGF
Sbjct: 73  GQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGF 132

Query: 136 HVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLAS-------------------- 195
           HV+CIDMWF+S+STCPLCRN VA   S PT   S E +                      
Sbjct: 133 HVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAGDYSLESPNYPTN 192

Query: 196 ----GSSMEVSSRRVCLEQAQTSSS---STANTRAEGMVVIDIPNMPSTSTSTADAGAGA 255
               G+   V+S  +CLE+   SS    ++     +GM+VIDIP   + + S+     G 
Sbjct: 193 ILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAENFSSLSPSTG- 252

Query: 256 GTGTCFADEEMKSVVTNKLRTLRRLLSRERR-IGNNPTSSDLEQEGMGQS 270
           GT    ++EE+KS +T +LR+L+RLLSRE+R +  +P S D+EQ G GQS
Sbjct: 253 GT----SEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQGGRGQS 297

[Close]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match: A5C2P4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027500 PE=4 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 126/290 (43.45%), Postives = 176/290 (60.69%), Query Frame = 1 

Query: 16  SFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRS-------- 75
           S A+EL+GKIMV  I++LF V+VFV+ LHLY++W   R  +   +  GS+R         
Sbjct: 13  SAAVELSGKIMVVAIIVLFFVVVFVLFLHLYAKWFWWRTADRGSSFGGSRRRRRRFVFAP 72

Query: 76  DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNHGF 135
            Q+ A+  +  GLD  +L S+PV+VF P +F++G+ECAVCL+EL  GEKARLLP+CNHGF
Sbjct: 73  GQDPALPAMRRGLDPSILGSIPVLVFRPEEFKDGLECAVCLSELVTGEKARLLPKCNHGF 132

Query: 136 HVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLAS-------------------- 195
           HV+CIDMWF+S+STCPLCRN VA   S PT   S E +                      
Sbjct: 133 HVECIDMWFQSHSTCPLCRNLVATVLSDPTTPQSPESIQLSDESSAAGDYSLESPNYPTN 192

Query: 196 ----GSSMEVSSRRVCLEQAQTSSS---STANTRAEGMVVIDIPNMPSTSTSTADAGAGA 255
               G+   V+S  +CLE+   SS    ++     +GM+VIDIP   + + S+     G 
Sbjct: 193 ILFWGNQTRVTSAGLCLEEGAASSQPPCASPGNGPDGMLVIDIPRQTAENFSSLSPSTG- 252

Query: 256 GTGTCFADEEMKSVVTNKLRTLRRLLSRERR-IGNNPTSSDLEQEGMGQS 270
           GT    ++EE+KS +T +LR+L+RLLSRE+R +  +P S D+EQ G GQ+
Sbjct: 253 GT----SEEELKSPMTTRLRSLKRLLSREKRVVPCSPGSVDVEQGGRGQN 297

[Close]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match: AT1G53820.1 (AT1G53820.1 RING/U-box superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 7.1e-33
Identity = 80/187 (42.78%), Postives = 113/187 (60.43%), Query Frame = 1 

Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE---- 60
           M+++  S    LF      E  GK+++ +I+ +F  I+F+++LHLY+R    R+++    
Sbjct: 1   MDEESVSN-GSLFSKFEGEETMGKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNL 60

Query: 61  -----STPNSTGSQRSDQESAVV-------PLWN-GLDAVVLRSLPVVVFSPGDFEEGME 120
                  P ST   R+ +    V       PL N GLD+ +L+S+ VVVF   DF++G+E
Sbjct: 61  NLIQSDDPGSTVIGRNPRRRRFVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLE 120

Query: 121 CAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAE 171
           CAVCL++L +G+KAR+LPRCNHGFHVDCIDMWF+S+STCPLCRN V           S E
Sbjct: 121 CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV----------GSVE 176

[Close]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match: AT1G72310.1 (AT1G72310.1 RING/U-box superfamily protein)

HSP 1 Score: 135.6 bits (340), Expect = 4.6e-32
Identity = 99/313 (31.63%), Postives = 153/313 (48.88%), Query Frame = 1 

Query: 4   DHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDE-----ST 63
           D+ S  + +FG     E+T KI++  I++LF+ ++FV+ILHLY++    RID+       
Sbjct: 3   DNRSTHSSMFGDLSTEEVTSKIILTAIIVLFMAVLFVLILHLYAKLYWWRIDQLQQQQQQ 62

Query: 64  PNSTGSQRSDQESAVVPLWN-------------------GLDAVVLRSLPVVVFSPGDFE 123
                 Q  DQ S   P+                     GL +  L SLP+V F     +
Sbjct: 63  QQQEQEQEEDQSSIAPPVVTRRQRRRFIFVPGQDALSNTGLTSFELSSLPIVFFRQDSCK 122

Query: 124 EGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPV-APKCSYPTE 183
           +G+EC++CL+EL +G+KARLLP+CNH FHV+CIDMWF+S+STCP+CRN V  P+ +    
Sbjct: 123 DGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTVLGPEQASSKR 182

Query: 184 LNSAEDLASGSSMEVSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGA 243
           +    D A  +    ++     + + +S     N    G    D  +  +T+  T + GA
Sbjct: 183 VEQVPDNAENAGTTNNNHDALSQLSTSSPEFPTNVLVWGRQ--DQVSTGNTNVGTQEDGA 242

Query: 244 GAGTGTCFADE---------------------EMKSVVTNK---------LRTLRRLLSR 260
            AG G   + E                      M+ +V  +         LR+LRR LSR
Sbjct: 243 -AGNGASQSQEAVVLDISDSSSRNHNVSSSSSSMRFIVEEEEAKSPMTTRLRSLRRFLSR 302

[Close]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match: AT3G16720.1 (AT3G16720.1 TOXICOS EN LEVADURA 2)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 95/271 (35.06%), Postives = 130/271 (47.97%), Query Frame = 1 

Query: 13  FGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR------ 72
           F GS    ++GKIM++ I+ILF V++ ++ LHLY+RW L R            R      
Sbjct: 18  FSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRARRRHLRRRSRNRRATMVF 77

Query: 73  --SDQESAV--VPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 132
             +D  +A   V    GLD  V++SLPV  FS    ++ +ECAVCL+E  E E  R+LP 
Sbjct: 78  FTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPN 137

Query: 133 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME----VSSRRV 192
           C H FHVDCIDMWF S+STCPLCR+ V         L   E  A+    E    V S  V
Sbjct: 138 CQHTFHVDCIDMWFHSHSTCPLCRSLV-------ESLAGIESTAAAREREVVIAVDSDPV 197

Query: 193 CLEQAQTSSSSTANTRAEG---MVVIDIPNMPSTSTSTADAGAGAGTGTCFADE------ 252
            + +  +SS  T      G   M+  D    P      A       T + F DE      
Sbjct: 198 LVIEPSSSSGLTDEPHGSGSSQMLREDSGRKP------AAIEVPRRTFSEFEDELTRRDS 257

Query: 253 ----EMKSVVTNKLRTLRRLLSRERRIGNNP 257
                 +S ++  L +  R+LSR+RR  ++P
Sbjct: 258 PASQSFRSPMSRML-SFTRMLSRDRRSASSP 274

[Close]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match: AT2G47560.1 (AT2G47560.1 RING/U-box superfamily protein)

HSP 1 Score: 119.0 bits (297), Expect = 4.5e-27
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = 1 

Query: 21  LTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVVPLWNGL 80
           L GKIM++++++LF+ ++ ++  H Y+RWL  R +        S      ++  P    L
Sbjct: 24  LNGKIMLSSVIVLFVAVIMILCFHSYARWLFRRHNRRIRRRIRSHLRTLSAS--PRDQAL 83

Query: 81  DAVVLRSLPVVVFS---PGDFEEGMECAVCLTELGEGEKARLLPRCNHGFHVDCIDMWFK 140
           D  VL  +P+ V+S   P   EE  EC+VCL+E  E ++ RLLP+C H FHVDCID WF+
Sbjct: 84  DQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFR 143

Query: 141 SNSTCPLCRNPVAP 152
           S STCPLCR PV P
Sbjct: 144 SRSTCPLCRAPVQP 155

[Close]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match: AT3G62690.1 (AT3G62690.1 AtL5)

HSP 1 Score: 112.8 bits (281), Expect = 3.2e-25
Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 1 

Query: 15  GSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQRSDQESAVV 74
           GS    L GKIM+A+++ILF+ ++ ++  H Y+RWL  R +        +      +A  
Sbjct: 18  GSSRYSLNGKIMLASVIILFVAVILILCFHSYARWLFRRQNRRIRRRISAHLRSLAAARD 77

Query: 75  PLWNG-----LDAVVLRSLPVVVFSPGDFEEGME-CAVCLTELGEGEKARLLPRCNHGFH 134
           P  +      LD  VL  +P+ V+S    E  +E C+VCL+E  E ++ R+LP+C H FH
Sbjct: 78  PTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFH 137

Query: 135 VDCIDMWFKSNSTCPLCRNPVAP----------KCSYPTELNSAEDLASGSSMEVSSRRV 194
           VDCID WF+S S+CPLCR PV P             +P+ +   ED  +GSS        
Sbjct: 138 VDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPS-VKPIEDTEAGSSSSSDES-- 197

[Close]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match: gi|659124576|ref|XP_008462235.1| (PREDICTED: RING-H2 finger protein ATL60-like [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 5.0e-81
Identity = 175/279 (62.72%), Postives = 203/279 (72.76%), Query Frame = 1 

Query: 6   ASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQ 65
           AS IN  FG SFAM+LTGKIM A ILIL LVI FV++L LYSRW LSR+ +S+ +S  +Q
Sbjct: 5   ASTINHPFGDSFAMQLTGKIMFAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSATNQ 64

Query: 66  RSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPRCNH 125
            S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPRCNH
Sbjct: 65  ESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPRCNH 124

Query: 126 GFHVDCIDMWFKSNSTCPLCRNPVA---PKCSYPTELNSAED--------LASGSSMEVS 185
           GFHVDCIDMWFKSNSTCPLCRNPVA   P      E  S+ +        L  G+ M+VS
Sbjct: 125 GFHVDCIDMWFKSNSTCPLCRNPVAITEPNLEQNPETESSTESPIFPTNVLFWGNQMQVS 184

Query: 186 SRRVCLEQAQTSSSSTAN----TRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEE 245
           SR VCLE+ Q SSSS+++    + A  MVVIDIP+ PSTS          G  TCFADEE
Sbjct: 185 SRGVCLEEPQISSSSSSSPSSPSSANAMVVIDIPSQPSTS----------GASTCFADEE 244

Query: 246 MKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           M SVVTN+LRTL+RLLSRERRIGNNP SSD+EQEG+GQS
Sbjct: 245 MGSVVTNRLRTLKRLLSRERRIGNNPISSDIEQEGIGQS 270

[Close]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match: gi|778729519|ref|XP_004141825.2| (PREDICTED: RING-H2 finger protein ATL60 [Cucumis sativus])

HSP 1 Score: 304.7 bits (779), Expect = 1.6e-79
Identity = 175/284 (61.62%), Postives = 204/284 (71.83%), Query Frame = 1 

Query: 3   QDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNST 62
           ++ AS I+  FG S AMELTGKIM+A ILIL LVI FV++L LYSRW LSR+ +S+ +S 
Sbjct: 2   EEQASTISHPFGDSIAMELTGKIMLAAILILCLVIAFVLLLQLYSRWFLSRLHQSSSDSA 61

Query: 63  GSQRSDQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGEKARLLPR 122
            +Q S   +    L  GLD+ VL S+PVVVFSP DF+EG+ECAVCL+EL EGEKARLLPR
Sbjct: 62  TNQESPVSTT---LRKGLDSAVLHSIPVVVFSPADFKEGLECAVCLSELSEGEKARLLPR 121

Query: 123 CNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSAEDLASGSSME---------- 182
           CNHGFHVDCIDMWFKSNSTCPLCRNPVA      TE NS ++  +GSSME          
Sbjct: 122 CNHGFHVDCIDMWFKSNSTCPLCRNPVA-----ITEPNSEQNPETGSSMESPIFPTNVLF 181

Query: 183 ------VSSRRVCLEQAQ-TSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTC 242
                 VSSR VCLE+ Q +SSSS+ ++    MVVIDIPN PSTS          G GTC
Sbjct: 182 WGNQMQVSSRGVCLEEPQISSSSSSTSSSINTMVVIDIPNEPSTS----------GAGTC 241

Query: 243 FADEEMKSVVTNKLRTLRRLLSRERRIGNNPTSSDLEQEGMGQS 270
           FADEEM SVVTN+LRTL+RLLSRERRIG NP  SD+EQEG+ QS
Sbjct: 242 FADEEMGSVVTNRLRTLKRLLSRERRIGTNPIPSDIEQEGIVQS 267

[Close]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match: gi|1009111538|ref|XP_015901416.1| (PREDICTED: RING-H2 finger protein ATL3 [Ziziphus jujuba])

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 144/312 (46.15%), Postives = 195/312 (62.50%), Query Frame = 1 

Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDEST--PNSTGS 66
           S+ ++ FG S A+ELTGKIMV  I++LF+V+VFV+ LHLY++W   R+D+S   P+   S
Sbjct: 5   SQFSRTFGESRAVELTGKIMVTAIIVLFVVVVFVLFLHLYAKWFWWRVDQSAADPHQQQS 64

Query: 67  QRS---------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           +R           Q+  +  L  GL+  +LRSLPV+V+ P DF++G+ECAVCL+EL +GE
Sbjct: 65  RRRRRSRFVFAPGQDPTIGSLRQGLEPSILRSLPVLVYRPEDFKDGLECAVCLSELVQGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPTELNSA----------EDL 186
           KARLLP+CNHGFHVDCIDMWF+S+STCP+CRN VAP+ S   +  +           E+L
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHSTCPICRNAVAPESSDDDDAAAGSAALAGSVHDENL 184

Query: 187 ASGSSME----------------VSSRRVCLEQAQ-----------TSSSSTANTRAEGM 246
           ASG S E                VSS   CLE  +           +SSSS A +R +GM
Sbjct: 185 ASGFSTETPNFPTNVLFWGNQTQVSSGGACLELEEGPSSQPLAPPSSSSSSLATSRPDGM 244

Query: 247 VVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPT 270
           +VIDIP   S+ST +   G        FADE++KS VT +LR+L+RLLSR++RI   +P+
Sbjct: 245 LVIDIPGENSSSTVSPSGGR-------FADEDLKSPVTTRLRSLKRLLSRDKRISPCSPS 304

[Close]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match: gi|595940365|ref|XP_007215821.1| (hypothetical protein PRUPE_ppa010059mg [Prunus persica])

HSP 1 Score: 213.8 bits (543), Expect = 3.8e-52
Identity = 127/279 (45.52%), Postives = 180/279 (64.52%), Query Frame = 1 

Query: 1   MEQDHASRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPN 60
           M    +S   +    S A++LTGKIM+  +L+LFLV+VFV+ LHLY++W   R D+ T  
Sbjct: 1   MTMGESSPFGRTLDDSNAVQLTGKIMMIAVLVLFLVVVFVLCLHLYAKWYWWRADDDTSA 60

Query: 61  STGSQRSDQ-------ESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGE 120
           +  S+R  +       +  V  +  GLD +VL+SLPV+VF   DF++G+ECAVCL+EL +
Sbjct: 61  NNQSRRRRRRFVFAPGQDTVATVRKGLDPLVLKSLPVLVFPSEDFKDGLECAVCLSELVQ 120

Query: 121 GEKARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-ELNSAEDLASGSSME 180
           GEKARLLP+C+HGFHVDCIDMWF+S+STCP+CRNPVAP+ S  +    S+  LA   S++
Sbjct: 121 GEKARLLPKCSHGFHVDCIDMWFQSHSTCPICRNPVAPESSVDSGAAGSSSALAESDSVQ 180

Query: 181 VSSRRVCLEQAQTSSSSTANTRAEGMVVIDIPNMPSTSTSTADAGAGAGTGTCFADEEMK 240
           +      L  A++ +S       +GM+VIDIP+   TS ++             ADE++K
Sbjct: 181 I------LSPAESLASGP-----DGMLVIDIPSQ--TSLASPSPSPSPSGNRFAADEDLK 240

Query: 241 SVVTNKLRTLRRLLSRERRIGN-NPTSSDLEQ-EGMGQS 270
           S  T +LR+L+RLLSR+RRI   +P+S D+EQ  G GQS
Sbjct: 241 SPATTRLRSLKRLLSRDRRISPCSPSSVDVEQGGGRGQS 266

[Close]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match: gi|703098996|ref|XP_010096533.1| (RING-H2 finger protein ATL3 [Morus notabilis])

HSP 1 Score: 212.6 bits (540), Expect = 8.4e-52
Identity = 135/307 (43.97%), Postives = 184/307 (59.93%), Query Frame = 1 

Query: 7   SRINQLFGGSFAMELTGKIMVATILILFLVIVFVMILHLYSRWLLSRIDESTPNSTGSQR 66
           +R ++    S A+ELTG+IMV  I++ F+V+VFV+ LHLY++W   RI+E    S G Q+
Sbjct: 5   TRFDRSLDDSKAVELTGRIMVVAIIVFFVVVVFVIFLHLYAKWFWWRIEEDAAES-GQQQ 64

Query: 67  S-----------DQESAVVPLWNGLDAVVLRSLPVVVFSPGDFEEGMECAVCLTELGEGE 126
           S            Q+  V  L  GL+  VLRSLPV+V+   DF+EG+ECAVCL+EL  GE
Sbjct: 65  SRRRRRRFVFAPGQDPTVPALRRGLEPSVLRSLPVLVYRAEDFKEGLECAVCLSELVNGE 124

Query: 127 KARLLPRCNHGFHVDCIDMWFKSNSTCPLCRNPVAPKCSYPT-------ELNSAEDLAS- 186
           KARLLP+CNHGFHVDCIDMWF+S++TCPLCRN V+P  S  +       E N + D  S 
Sbjct: 125 KARLLPKCNHGFHVDCIDMWFQSHATCPLCRNSVSPVSSSDSTGSENVPEENLSSDYTSG 184

Query: 187 -----------GSSMEVSSRRVCLEQA------------QTSSSSTANTRAEGMVVIDIP 246
                      G   +VSS   CLE+              +SSSS++ TR  G +VIDIP
Sbjct: 185 VPNFPTNVLFWGDETQVSSGNACLEEGPSFQSQPSAVVPSSSSSSSSTTRIVGALVIDIP 244

Query: 247 N-MPSTSTSTADAGAGAGTGTCFADEEMKSVVTNKLRTLRRLLSRERRIGN-NPTSSDLE 270
           N  P+ ++S + +G           +E+KS VT +LR+L+RLLSRER++   +P+S D+E
Sbjct: 245 NENPAAASSLSPSG-----------DELKSPVTTRLRSLKRLLSRERKVSPCSPSSGDIE 299

The following BLAST results are available for this feature:
BLAST of Cp4.1LG12g09600 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL60_ARATH1.3e-3142.78RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2 SV=1[more]
ATL3_ARATH8.2e-3131.63RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2 SV=1[more]
ATL64_ARATH7.9e-2643.28RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2 SV=1[more]
ATL2_ARATH7.9e-2635.06RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2 SV=2[more]
ATL5_ARATH5.7e-2435.71RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1[more]
BLAST of Cp4.1LG12g09600 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6T2_CUCSA1.1e-7961.62Uncharacterized protein OS=Cucumis sativus GN=Csa_7G447970 PE=4 SV=1[more]
M5XD68_PRUPE2.6e-5245.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010059mg PE=4 SV=1[more]
W9RQG6_9ROSA5.9e-5243.97RING-H2 finger protein ATL3 OS=Morus notabilis GN=L484_017986 PE=4 SV=1[more]
F6HXK6_VITVI5.5e-5043.79Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0002g00220 PE=4 SV=... [more]
A5C2P4_VITVI1.2e-4943.45Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027500 PE=4 SV=1[more]
BLAST of Cp4.1LG12g09600 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G53820.17.1e-3342.78 RING/U-box superfamily protein[more]
AT1G72310.14.6e-3231.63 RING/U-box superfamily protein[more]
AT3G16720.14.5e-2735.06 TOXICOS EN LEVADURA 2[more]
AT2G47560.14.5e-2743.28 RING/U-box superfamily protein[more]
AT3G62690.13.2e-2535.71 AtL5[more]
BLAST of Cp4.1LG12g09600 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659124576|ref|XP_008462235.1|5.0e-8162.72PREDICTED: RING-H2 finger protein ATL60-like [Cucumis melo][more]
gi|778729519|ref|XP_004141825.2|1.6e-7961.62PREDICTED: RING-H2 finger protein ATL60 [Cucumis sativus][more]
gi|1009111538|ref|XP_015901416.1|1.6e-5846.15PREDICTED: RING-H2 finger protein ATL3 [Ziziphus jujuba][more]
gi|595940365|ref|XP_007215821.1|3.8e-5245.52hypothetical protein PRUPE_ppa010059mg [Prunus persica][more]
gi|703098996|ref|XP_010096533.1|8.4e-5243.97RING-H2 finger protein ATL3 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g09600.1Cp4.1LG12g09600.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 103..146
score: 4.2
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 104..145
score: 3.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 104..146
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 99..149
score: 3.1
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 1..170
score: 8.6
NoneNo IPR availablePANTHERPTHR14155:SF99RING-H2 FINGER PROTEIN ATL3coord: 1..170
score: 8.6
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 84..153
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g09600Cucsa.149170Cucumber (Gy14) v1cgycpeB0397
Cp4.1LG12g09600CmaCh08G008350Cucurbita maxima (Rimu)cmacpeB903
Cp4.1LG12g09600CmoCh08G008060Cucurbita moschata (Rifu)cmocpeB839
Cp4.1LG12g09600Cla012558Watermelon (97103) v1cpewmB149
Cp4.1LG12g09600Csa3G646670Cucumber (Chinese Long) v2cpecuB138
Cp4.1LG12g09600MELO3C022709Melon (DHL92) v3.5.1cpemeB134
Cp4.1LG12g09600ClCG07G014250Watermelon (Charleston Gray)cpewcgB146
Cp4.1LG12g09600CSPI03G28670Wild cucumber (PI 183967)cpecpiB139
Cp4.1LG12g09600Lsi07G006370Bottle gourd (USVL1VR-Ls)cpelsiB126
Cp4.1LG12g09600MELO3C022709.2Melon (DHL92) v3.6.1cpemedB161
Cp4.1LG12g09600CsaV3_3G031070Cucumber (Chinese Long) v3cpecucB0157
Cp4.1LG12g09600Bhi01G002205Wax gourdcpewgoB0191
Cp4.1LG12g09600CsGy3G026650Cucumber (Gy14) v2cgybcpeB307
Cp4.1LG12g09600Carg06399Silver-seed gourdcarcpeB0172
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG12g09600Cp4.1LG17g04330Cucurbita pepo (Zucchini)cpecpeB157
Cp4.1LG12g09600Cp4.1LG03g14710Cucurbita pepo (Zucchini)cpecpeB186
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG12g09600Silver-seed gourdcarcpeB0849
Cp4.1LG12g09600Silver-seed gourdcarcpeB1075
Cp4.1LG12g09600Cucumber (Chinese Long) v3cpecucB0181
Cp4.1LG12g09600Wax gourdcpewgoB0202
Cp4.1LG12g09600Cucurbita pepo (Zucchini)cpecpeB180
Cp4.1LG12g09600Cucumber (Gy14) v1cgycpeB0935
Cp4.1LG12g09600Cucurbita maxima (Rimu)cmacpeB261
Cp4.1LG12g09600Cucurbita maxima (Rimu)cmacpeB371
Cp4.1LG12g09600Cucurbita moschata (Rifu)cmocpeB226
Cp4.1LG12g09600Cucurbita moschata (Rifu)cmocpeB335
Cp4.1LG12g09600Wild cucumber (PI 183967)cpecpiB158
Cp4.1LG12g09600Cucumber (Chinese Long) v2cpecuB156
Cp4.1LG12g09600Bottle gourd (USVL1VR-Ls)cpelsiB110
Cp4.1LG12g09600Watermelon (Charleston Gray)cpewcgB128
Cp4.1LG12g09600Watermelon (97103) v1cpewmB134
Cp4.1LG12g09600Melon (DHL92) v3.5.1cpemeB117
Cp4.1LG12g09600Cucumber (Gy14) v2cgybcpeB899
Cp4.1LG12g09600Melon (DHL92) v3.6.1cpemedB144