Cp4.1LG12g07150.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGGTCATAAAACCTCTCAATTCTTCAAATTTTGTGCTTCTTTTTTCCATGAAGAACTGAAAATGGTTTTTGATTGAAAAAAACAGAGTCCAGACGGCGATGTAATCGATTGTGTTCATATGGCTCATCAGCCAGCTTTTGATCATCCTCTTCTCAGAAACCACACGATTCAGGTCTGTTTTTTCTTCTGGGTTTTCTTCTTTTGTTCTGAGGATGAAAATGGTTGTTGTTTTTTGTTTCAGATGAGACCAAATTTTCATCCAGAAGGGGTTTTCAGTGACAGTAAAGTAACTTCAAGAGCTTCGATAACTCAATTATGGCACTTGAAAGGAAGGTGCCCAGAAGGGACGATTCCCATTAGAAGAACGAAAAGAGATGATATTTTAAGAGCAAGCTCTGTGGAAAGCTACGGCAAAAAGAGGGCTCATGCCACTGTGAAACCAAGCTCCATTGATATCGATTTCAATGCCCAAAATGGACATCAGGTACTTGAAGAAACAGAGTATTTTCACCATTCCCCAAAAGGGTCTTTCTTAAATCTGCGTTTTTTTTGCTTTTGGAGTTGTTAGCATGCAATAACTTATGTTGAAGGAGGACAATACTATGGAGCTAAGGCAACCATGAACGTTTGGTCACCTAAAATCGAACAGACCAACGAATTCAGCCTCTCGCAGATTTGGATTCTTGGAGGAACTTTTGGGGAAGATCTTAATAGCATTGAAGCTGGTTGGCAGGTTTATGAACTGTTCTTAATTATCGACTTTTTTCTAGAAATTTGGCTGAAAGATTTCGATTATCTGAGCAAGTTTTTGTTTGTTCTTCTAAACAGGTTAGCCCTGATTTGTATGGAGATAACAATACTCGACTTTTCACTTATTGGACTGTAAGTTGTTCTTGGTGTTCTGCTTTCAATTTTCATGAACTTTGATTCAAAACTCTGAAGAATTGAACTTGGATCGATGTTTCTCTCTAACAGAGTGATGCATATCAAGCCACTGGCTGCTACAATCTGCTCTGTTCTGGGTTTGTCCAAATCAACAATGACATAGCCATGGGTGCCAGCATTTATCCCATTTCTTCTTACAAAGGCTCTCAATATGACATTAGCTTGCTCATCTGGAAGGTGAGTTCTAAGAAAAATTTGATTTTTCCTCAAATTTTGAGCTGGGTTTTGATCAAAACAGGAAAAGAATTAGAAATCTCACGAACCCACTTGAATTTTCTTCCAAATTTGAGCTGGGTTTTAATCAAAACAGGAACAAAACAGGGGAAATCTCACTTATTCTCTTGAATTTTCTTCAAATTTTGATGAAAACAGGGGAAACAGAGATACCCACTTGAATGTTCATCAAAATATGAACTGGGAGTTCATAAAAAAAACAAAAACTTTACAAATTACAAGTGATTTTAGCCACCTACTCGAAAACTTTGATGAAAACCAGAGAAAGGCTGACAAACATGTCCAACTTTTTGCGCCCATCCATTAAAGTGTTCTGAGTTGTTGTCTAATTGGTAGGACCCTAAAGAAGGAAACTGGTGGATGCAATTCGGGAATAGCCACGTTTTGGGGTATTGGCCGGCGTTCTTATTCTCATACCTCACCGACAGCGCCTCCATGATCGAGTGGGGCGGCGAAGTCGTCAACTCTGAACCCGACGGCCAACACACTTCCACTCAGATGGGCAGCGGCCACTTCCCCGACCAGGGCTTCGCCAACGCCGCCTACTTTCGTAACATCCAGGTTCCTTAATCATCCCTTCCCTTCATAAACTTGATTAAATTAGGGTAATTAATTATCATCTTTGTTAATTGATGTTGGATTAAGCCAGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA ATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGA MGALKLLLLLILVSLSLMAAAGKSPRHRHRHRWLEAHTHMKKLNKPHLKSIKMRPNFHPEGIVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
BLAST of Cp4.1LG12g07150.1 vs. TrEMBL
Match: A0A0A0KBL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.6e-19 Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TrEMBL
Match: A0A0D2NDL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TrEMBL
Match: A0A0B0MW69_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07210 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TrEMBL
Match: A0A0D2QVB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TrEMBL
Match: A0A067JCA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05251 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 6.2e-16 Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TAIR10
Match: AT3G13510.1 (AT3G13510.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 87.4 bits (215), Expect = 5.9e-18 Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TAIR10
Match: AT1G55360.1 (AT1G55360.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17 Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TAIR10
Match: AT5G56530.1 (AT5G56530.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 85.5 bits (210), Expect = 2.3e-17 Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TAIR10
Match: AT2G44210.2 (AT2G44210.2 Protein of Unknown Function (DUF239)) HSP 1 Score: 78.2 bits (191), Expect = 3.6e-15 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. TAIR10
Match: AT5G50150.1 (AT5G50150.1 Protein of Unknown Function (DUF239)) HSP 1 Score: 64.7 bits (156), Expect = 4.1e-11 Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. NCBI nr
Match: gi|449436230|ref|XP_004135896.1| (PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19 Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. NCBI nr
Match: gi|659122585|ref|XP_008461220.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 [Cucumis melo]) HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19 Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. NCBI nr
Match: gi|763743616|gb|KJB11115.1| (hypothetical protein B456_001G241400 [Gossypium raimondii]) HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. NCBI nr
Match: gi|728825579|gb|KHG06313.1| (hypothetical protein F383_07210 [Gossypium arboreum]) HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
BLAST of Cp4.1LG12g07150.1 vs. NCBI nr
Match: gi|823128054|ref|XP_012441471.1| (PREDICTED: uncharacterized protein LOC105766526 [Gossypium raimondii]) HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16 Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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