Cp4.1LG12g07150 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG12g07150
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProtein of Unknown Function (DUF239)
LocationCp4.1LG12 : 7161622 .. 7164263 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGGTCATAAAACCTCTCAATTCTTCAAATTTTGTGCTTCTTTTTTCCATGAAGAACTGAAAATGGTTTTTGATTGAAAAAAACAGAGTCCAGACGGCGATGTAATCGATTGTGTTCATATGGCTCATCAGCCAGCTTTTGATCATCCTCTTCTCAGAAACCACACGATTCAGGTCTGTTTTTTCTTCTGGGTTTTCTTCTTTTGTTCTGAGGATGAAAATGGTTGTTGTTTTTTGTTTCAGATGAGACCAAATTTTCATCCAGAAGGGGTTTTCAGTGACAGTAAAGTAACTTCAAGAGCTTCGATAACTCAATTATGGCACTTGAAAGGAAGGTGCCCAGAAGGGACGATTCCCATTAGAAGAACGAAAAGAGATGATATTTTAAGAGCAAGCTCTGTGGAAAGCTACGGCAAAAAGAGGGCTCATGCCACTGTGAAACCAAGCTCCATTGATATCGATTTCAATGCCCAAAATGGACATCAGGTACTTGAAGAAACAGAGTATTTTCACCATTCCCCAAAAGGGTCTTTCTTAAATCTGCGTTTTTTTTGCTTTTGGAGTTGTTAGCATGCAATAACTTATGTTGAAGGAGGACAATACTATGGAGCTAAGGCAACCATGAACGTTTGGTCACCTAAAATCGAACAGACCAACGAATTCAGCCTCTCGCAGATTTGGATTCTTGGAGGAACTTTTGGGGAAGATCTTAATAGCATTGAAGCTGGTTGGCAGGTTTATGAACTGTTCTTAATTATCGACTTTTTTCTAGAAATTTGGCTGAAAGATTTCGATTATCTGAGCAAGTTTTTGTTTGTTCTTCTAAACAGGTTAGCCCTGATTTGTATGGAGATAACAATACTCGACTTTTCACTTATTGGACTGTAAGTTGTTCTTGGTGTTCTGCTTTCAATTTTCATGAACTTTGATTCAAAACTCTGAAGAATTGAACTTGGATCGATGTTTCTCTCTAACAGAGTGATGCATATCAAGCCACTGGCTGCTACAATCTGCTCTGTTCTGGGTTTGTCCAAATCAACAATGACATAGCCATGGGTGCCAGCATTTATCCCATTTCTTCTTACAAAGGCTCTCAATATGACATTAGCTTGCTCATCTGGAAGGTGAGTTCTAAGAAAAATTTGATTTTTCCTCAAATTTTGAGCTGGGTTTTGATCAAAACAGGAAAAGAATTAGAAATCTCACGAACCCACTTGAATTTTCTTCCAAATTTGAGCTGGGTTTTAATCAAAACAGGAACAAAACAGGGGAAATCTCACTTATTCTCTTGAATTTTCTTCAAATTTTGATGAAAACAGGGGAAACAGAGATACCCACTTGAATGTTCATCAAAATATGAACTGGGAGTTCATAAAAAAAACAAAAACTTTACAAATTACAAGTGATTTTAGCCACCTACTCGAAAACTTTGATGAAAACCAGAGAAAGGCTGACAAACATGTCCAACTTTTTGCGCCCATCCATTAAAGTGTTCTGAGTTGTTGTCTAATTGGTAGGACCCTAAAGAAGGAAACTGGTGGATGCAATTCGGGAATAGCCACGTTTTGGGGTATTGGCCGGCGTTCTTATTCTCATACCTCACCGACAGCGCCTCCATGATCGAGTGGGGCGGCGAAGTCGTCAACTCTGAACCCGACGGCCAACACACTTCCACTCAGATGGGCAGCGGCCACTTCCCCGACCAGGGCTTCGCCAACGCCGCCTACTTTCGTAACATCCAGGTTCCTTAATCATCCCTTCCCTTCATAAACTTGATTAAATTAGGGTAATTAATTATCATCTTTGTTAATTGATGTTGGATTAAGCCAGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA

mRNA sequence

CAAGCAAGATGGCGTCGGCAGTTAGTGTTGGACAGTAGCAAACTGGGGAAGGGCATGGCGTAAAAAACATATCAACAATAACAATTTAATTTTAATTTTAATTTTAATTTTAATTGTGCACTTCTTTCTGGGAATCAGCCACTAACCCATTCGATTCCATAAAGCTCTTCAACTTTTTCCTCTCAAAATTCGCTGAAATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGATTTTAAATTATCAAATATATATATATATATATAAATGCATTTCTTGTGCATTATTAATTAATTATATATATATATGTATATTTTGATGTTTCTTTTAACTCATCAATGCTTTTCTTTTTAATCTCTTTGGGAAAATTGTGTATAAGTCTGCTTAATTTCTTCTTCTTTTGAATTAATTTATATAATAGATTCCATTCCAGCTGGTTTTATTTTATTACAAAACTTAAATACTATAATGTTGGTATTTTATGGTCTTTTTTCTTGTGATTTTGATCTTTGTACTCGGAACCATCAATCTGTCGTGTTTGGA

Coding sequence (CDS)

ATGGGTGCTCTAAAGCTGCTCCTCCTGCTAATACTGGTTTCTCTGTCTCTGATGGCGGCGGCCGGGAAATCCCCCCGCCACCGCCACCGCCACCGGTGGCTGGAAGCTCACACCCACATGAAGAAGCTCAATAAACCGCATCTCAAGTCCATCAAGATGAGACCAAATTTTCATCCAGAAGGGATTGTTGGGGGTTCCAACAACCTCCGGGCGCCGGAGGACATTGCAACGTTCACGGAGCAACCAAGTTGCTACGACGTTCAGACCGGCAAGTCCGACGACTGGGGCAACTACTTCTTCTACGGCGGCCCTGGCAGAAATCCAAACTGCCTTTGA

Protein sequence

MGALKLLLLLILVSLSLMAAAGKSPRHRHRHRWLEAHTHMKKLNKPHLKSIKMRPNFHPEGIVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNCL
BLAST of Cp4.1LG12g07150 vs. TrEMBL
Match: A0A0A0KBL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.6e-19
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 369 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 417

BLAST of Cp4.1LG12g07150 vs. TrEMBL
Match: A0A0D2NDL6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 373 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 421

BLAST of Cp4.1LG12g07150 vs. TrEMBL
Match: A0A0B0MW69_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_07210 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 373 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 421

BLAST of Cp4.1LG12g07150 vs. TrEMBL
Match: A0A0D2QVB9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 289 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 337

BLAST of Cp4.1LG12g07150 vs. TrEMBL
Match: A0A067JCA1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05251 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.2e-16
Identity = 38/49 (77.55%), Postives = 40/49 (81.63%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DI TFTEQ +CYD Q G   DWGNYFFYGGPGRNPNC
Sbjct: 370 IVDGSNNLRDPKDIDTFTEQSNCYDAQNGNDGDWGNYFFYGGPGRNPNC 418

BLAST of Cp4.1LG12g07150 vs. TAIR10
Match: AT3G13510.1 (AT3G13510.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 87.4 bits (215), Expect = 5.9e-18
Identity = 33/49 (67.35%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSNNL+AP+ + TFTE+ +CYDVQTG +DDWG+YF+YGGPG+N NC
Sbjct: 370 VVDGSNNLKAPKGLGTFTEKSNCYDVQTGSNDDWGHYFYYGGPGKNKNC 418

BLAST of Cp4.1LG12g07150 vs. TAIR10
Match: AT1G55360.1 (AT1G55360.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 86.7 bits (213), Expect = 1.0e-17
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSNNL+AP+ + TFTEQ +CYDVQTG +DDWG+YF+YGGPG+N  C
Sbjct: 373 VVDGSNNLKAPKGLGTFTEQSNCYDVQTGSNDDWGHYFYYGGPGKNQKC 421

BLAST of Cp4.1LG12g07150 vs. TAIR10
Match: AT5G56530.1 (AT5G56530.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 85.5 bits (210), Expect = 2.3e-17
Identity = 32/49 (65.31%), Postives = 42/49 (85.71%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V  SNNL+ P+ + TFTE+ +CYDV+ GK+DDWG+YF+YGGPGRNPNC
Sbjct: 371 VVDSSNNLKEPKGLNTFTEKSNCYDVEVGKNDDWGHYFYYGGPGRNPNC 419

BLAST of Cp4.1LG12g07150 vs. TAIR10
Match: AT2G44210.2 (AT2G44210.2 Protein of Unknown Function (DUF239))

HSP 1 Score: 78.2 bits (191), Expect = 3.6e-15
Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V GSN LR PE++  FT+Q +CY+V++G    WG+YF+YGGPGRNPNC
Sbjct: 396 VVDGSNELRNPENLQVFTDQENCYNVKSGNGGSWGSYFYYGGPGRNPNC 444

BLAST of Cp4.1LG12g07150 vs. TAIR10
Match: AT5G50150.1 (AT5G50150.1 Protein of Unknown Function (DUF239))

HSP 1 Score: 64.7 bits (156), Expect = 4.1e-11
Identity = 23/49 (46.94%), Postives = 34/49 (69.39%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           +V   NNL   +++    + P+CYD++ GK++ WG YF+YGGPGRNP C
Sbjct: 371 VVDWDNNLLPLKNLHVLADHPACYDIRQGKNNVWGTYFYYGGPGRNPRC 419

BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: gi|449436230|ref|XP_004135896.1| (PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 369 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 417

BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: gi|659122585|ref|XP_008461220.1| (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 [Cucumis melo])

HSP 1 Score: 103.6 bits (257), Expect = 2.3e-19
Identity = 44/49 (89.80%), Postives = 45/49 (91.84%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IVG SN+LRAPEDI  FTEQPSCYDVQ GKSDDWGNYFFYGGPGRNPNC
Sbjct: 370 IVGESNSLRAPEDIGIFTEQPSCYDVQNGKSDDWGNYFFYGGPGRNPNC 418

BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: gi|763743616|gb|KJB11115.1| (hypothetical protein B456_001G241400 [Gossypium raimondii])

HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 289 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 337

BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: gi|728825579|gb|KHG06313.1| (hypothetical protein F383_07210 [Gossypium arboreum])

HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 373 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 421

BLAST of Cp4.1LG12g07150 vs. NCBI nr
Match: gi|823128054|ref|XP_012441471.1| (PREDICTED: uncharacterized protein LOC105766526 [Gossypium raimondii])

HSP 1 Score: 92.0 bits (227), Expect = 6.8e-16
Identity = 38/49 (77.55%), Postives = 43/49 (87.76%), Query Frame = 1

Query: 62  IVGGSNNLRAPEDIATFTEQPSCYDVQTGKSDDWGNYFFYGGPGRNPNC 111
           IV GSNNLR P+DIATFTEQ +CYDVQTGK  +WG+YF+YGGPGRN NC
Sbjct: 373 IVDGSNNLRVPKDIATFTEQSNCYDVQTGKGGNWGSYFYYGGPGRNANC 421

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KBL1_CUCSA1.6e-1989.80Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430210 PE=4 SV=1[more]
A0A0D2NDL6_GOSRA4.8e-1677.55Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1[more]
A0A0B0MW69_GOSAR4.8e-1677.55Uncharacterized protein OS=Gossypium arboreum GN=F383_07210 PE=4 SV=1[more]
A0A0D2QVB9_GOSRA4.8e-1677.55Uncharacterized protein OS=Gossypium raimondii GN=B456_001G241400 PE=4 SV=1[more]
A0A067JCA1_JATCU6.2e-1677.55Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05251 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G13510.15.9e-1867.35 Protein of Unknown Function (DUF239)[more]
AT1G55360.11.0e-1767.35 Protein of Unknown Function (DUF239)[more]
AT5G56530.12.3e-1765.31 Protein of Unknown Function (DUF239)[more]
AT2G44210.23.6e-1559.18 Protein of Unknown Function (DUF239)[more]
AT5G50150.14.1e-1146.94 Protein of Unknown Function (DUF239)[more]
Match NameE-valueIdentityDescription
gi|449436230|ref|XP_004135896.1|2.3e-1989.80PREDICTED: uncharacterized protein LOC101218833 [Cucumis sativus][more]
gi|659122585|ref|XP_008461220.1|2.3e-1989.80PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499872 [Cucumis me... [more]
gi|763743616|gb|KJB11115.1|6.8e-1677.55hypothetical protein B456_001G241400 [Gossypium raimondii][more]
gi|728825579|gb|KHG06313.1|6.8e-1677.55hypothetical protein F383_07210 [Gossypium arboreum][more]
gi|823128054|ref|XP_012441471.1|6.8e-1677.55PREDICTED: uncharacterized protein LOC105766526 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004314Neprosin
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG12g07150.1Cp4.1LG12g07150.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004314Domain of unknown function DUF239PFAMPF03080DUF239coord: 66..104
score: 1.
NoneNo IPR availablePANTHERPTHR31589FAMILY NOT NAMEDcoord: 62..110
score: 1.2
NoneNo IPR availablePANTHERPTHR31589:SF24SUBFAMILY NOT NAMEDcoord: 62..110
score: 1.2

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG12g07150MELO3C023496.2Melon (DHL92) v3.6.1cpemedB150
Cp4.1LG12g07150CsaV3_7G031580Cucumber (Chinese Long) v3cpecucB0188
Cp4.1LG12g07150Bhi09G000464Wax gourdcpewgoB0201
Cp4.1LG12g07150CsGy7G018070Cucumber (Gy14) v2cgybcpeB906
Cp4.1LG12g07150Carg18717Silver-seed gourdcarcpeB0493
Cp4.1LG12g07150Carg13483Silver-seed gourdcarcpeB0631
The following gene(s) are paralogous to this gene:

None