Cp4.1LG12g04530.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCATCCACTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGGTATGCTCTTTTCCTTTTTAAATCATTTTTATTTTCTCTTAATAATTAATTGATTGATTGATTATTGTATTTGTATTTGTTTCACAGATAAGCTACACATCAAAGTGAAGAACTGA TCATCCACTCGCAAAAAGAAGCATTGGAAAGGCAGAAGAAAAAGCATAAAATAAAATAAAATAAAATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGATAAGCTACACATCAAAGTGAAGAACTGA ATGGCGAAGAAGATGATTGCAGTGTTGTTGGTGTGCGTTGTGGTGGTGGCTGCATTGCAGGCTTCGAGTGCCACTGAAAGCGCGAAGGAGGCCAAATATGAGGCTAAATTTGAAGCCAAGTATAGGTTATGCTACGAAAAATGCGAGAAGGAATGCCTTGAAAAGGGCAATGGCCAAAGCTTCTGCGAAGTTAAGTGCGATGAAGATTGTGATGAGAAAGAAGCCGCTGATAAGCTACACATCAAAGTGAAGAACTGA MAKKMIAVLLVCVVVVAALQASSATESAKEAKYEAKFEAKYRLCYEKCEKECLEKGNGQSFCEVKCDEDCDEKEAADKLHIKVKN
BLAST of Cp4.1LG12g04530.1 vs. Swiss-Prot
Match: ALL6_OLEEU (Major pollen allergen Ole e 6 OS=Olea europaea GN=OLE6 PE=1 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 8.9e-08 Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. TrEMBL
Match: A0A0A0KPA7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G222980 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-22 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. TrEMBL
Match: A0A0A0KCI6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106710 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 3.4e-22 Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. TrEMBL
Match: A0A0A0KFH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102480 PE=4 SV=1) HSP 1 Score: 110.9 bits (276), Expect = 7.6e-22 Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. TrEMBL
Match: A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106720 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 4.9e-21 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. TrEMBL
Match: A0A0A0KDP7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G102490 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.9e-20 Identity = 52/81 (64.20%), Postives = 67/81 (82.72%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. NCBI nr
Match: gi|659114221|ref|XP_008456958.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]) HSP 1 Score: 117.1 bits (292), Expect = 1.5e-23 Identity = 58/83 (69.88%), Postives = 73/83 (87.95%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. NCBI nr
Match: gi|449457470|ref|XP_004146471.1| (PREDICTED: major pollen allergen Ole e 6-like [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-22 Identity = 58/83 (69.88%), Postives = 71/83 (85.54%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. NCBI nr
Match: gi|700191315|gb|KGN46519.1| (hypothetical protein Csa_6G106710 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 4.9e-22 Identity = 58/84 (69.05%), Postives = 67/84 (79.76%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. NCBI nr
Match: gi|700191282|gb|KGN46486.1| (hypothetical protein Csa_6G102480 [Cucumis sativus]) HSP 1 Score: 110.9 bits (276), Expect = 1.1e-21 Identity = 55/84 (65.48%), Postives = 68/84 (80.95%), Query Frame = 1
BLAST of Cp4.1LG12g04530.1 vs. NCBI nr
Match: gi|700191316|gb|KGN46520.1| (hypothetical protein Csa_6G106720 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 7.0e-21 Identity = 58/84 (69.05%), Postives = 66/84 (78.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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