Cp4.1LG12g04290.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCGTATTCGAGGGCCCATCCCGTTTACGTGAAGCCGATTTCGAGTTAAATCCGACCAATGGTTCGAGGGATATCGGGCCATATGACTACTCAACTTTTGTCACCTTGGAATCAAAAGAGTTCATAAACATAATCACAGACTTTGAATTTTATCGTTATGGTAATACCCCCTTTAATCAAAAGATACACATTTTATGTTGCTAACATGTTCTTGAATTTCTTCATGTTTGTGGCAGTTCTTGTTACTCTCACGAGCTCGCAAGTCAAATTCTCGTACACGAGGTTTCAGACTATTATTACTCGTGAGGTATTATTATTTGTTGAGGATTGTTAGGAAATGATCATGGGTTTACAAGTCGTTATTAAAATTTGGAATTTATTGCATGTAGAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGAAATGGGAAAGTTTGTGTAGCCTTACAAAACTATGATCAAATGCCATTTCTTGACATTCTTTTTTTTTTTTTAATTGTTCTACTCTTGAATTTGTTATAATCACGTGTTTCAACGTTGATCAATTCGGAAAATGAATCATCGAATGGAGATAGTATTACTTCGATGATCTTTTTCTTGATATGGGACTACTCTTAATAATTCTGAACCGTCAGTGCCATATAGCCACTGCTAGGATTGAGTTTTCTTTCTAAAAATTTGACATGAATACTTTGATTCTCTAAGTAAGTTGGTTTTGAGTTATTGTTTCAGTACCCTAGTTCTCTTGTTTCGATCAAGATAAT ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGAAATGGGAAAGTTTGTGTAGCCTTACAAAACTATGATCAAATGCCATTTCTTGACATTCTTTTTTTTTTTTTAATTGTTCTACTCTTGAATTTGTTATAATCACGTGTTTCAACGTTGATCAATTCGGAAAATGAATCATCGAATGGAGATAGTATTACTTCGATGATCTTTTTCTTGATATGGGACTACTCTTAATAATTCTGAACCGTCAGTGCCATATAGCCACTGCTAGGATTGAGTTTTCTTTCTAAAAATTTGACATGAATACTTTGATTCTCTAAGTAAGTTGGTTTTGAGTTATTGTTTCAGTACCCTAGTTCTCTTGTTTCGATCAAGATAAT ATGTTCTTCTTCATACTAGACCAAACCCATGAGCTAGCCGAAGCACTGTACGTAATCGCCAGCGTTACTGACATAGCCTATCTCAAATTCTCAATGGAAAAAATGTCCATAATGGGCAGTGCCTCACCAGAAACTGATTGCATCATAGCAATACAACTCTGCCCTCCATACTTCCAAAATTATACCTGCAACCATCTTCATTATTCATGGATTAACATCCACAAAATCTTCCCTCTCATGTCCGATCTCAACCGAGCCGGCTTCTCTTCCTTGTCCTTCTCTTTTACAGCCCCGAATCTTGCCAACCTCAGTGGCCGATGCGTTATTGGAGGTATTGAAGAATCGGGTTTGATTAAATATATAATCACTCTTCATCCAATGCATACTTTCTGCAATTTGGTTCGTCAAACTGAAAGGGTATGGCTATTCAAGTCCGATGAAGCTGCCAAAGGTGTAATTGCTGCCCCTCTAGGACTGCATGCTCGATTTGTGACCTATTTTCCTGATGATTGGAAAGAATGA MFFFILDQTHELAEALYVIASVTDIAYLKFSMEKMSIMGSASPETDCIIAIQLCPPYFQNYTCNHLHYSWINIHKIFPLMSDLNRAGFSSLSFSFTAPNLANLSGRCVIGGIEESGLIKYIITLHPMHTFCNLVRQTERVWLFKSDEAAKGVIAAPLGLHARFVTYFPDDWKE
BLAST of Cp4.1LG12g04290.1 vs. TrEMBL
Match: A0A0A0K833_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G002320 PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.1e-18 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. TrEMBL
Match: A0A0A0KA18_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G006750 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 5.5e-11 Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. TrEMBL
Match: A0A0A0LIF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G848840 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 2.7e-10 Identity = 30/70 (42.86%), Postives = 47/70 (67.14%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. TrEMBL
Match: A0A0A0KFM5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G106730 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.8e-09 Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. TrEMBL
Match: A0A0A0LLD1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G154090 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.1e-08 Identity = 26/64 (40.62%), Postives = 41/64 (64.06%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. NCBI nr
Match: gi|659116807|ref|XP_008458269.1| (PREDICTED: uncharacterized protein LOC103497738 [Cucumis melo]) HSP 1 Score: 99.4 bits (246), Expect = 6.7e-18 Identity = 51/105 (48.57%), Postives = 68/105 (64.76%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. NCBI nr
Match: gi|700190434|gb|KGN45638.1| (hypothetical protein Csa_6G002320 [Cucumis sativus]) HSP 1 Score: 99.0 bits (245), Expect = 8.7e-18 Identity = 51/105 (48.57%), Postives = 67/105 (63.81%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. NCBI nr
Match: gi|778709186|ref|XP_004138491.2| (PREDICTED: uncharacterized protein LOC101219791 [Cucumis sativus]) HSP 1 Score: 75.9 bits (185), Expect = 7.9e-11 Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. NCBI nr
Match: gi|778686236|ref|XP_011652354.1| (PREDICTED: uncharacterized protein LOC101206630 isoform X2 [Cucumis sativus]) HSP 1 Score: 75.1 bits (183), Expect = 1.3e-10 Identity = 32/77 (41.56%), Postives = 49/77 (63.64%), Query Frame = 1
BLAST of Cp4.1LG12g04290.1 vs. NCBI nr
Match: gi|659119586|ref|XP_008459734.1| (PREDICTED: uncharacterized protein LOC103498776 [Cucumis melo]) HSP 1 Score: 73.6 bits (179), Expect = 3.9e-10 Identity = 34/83 (40.96%), Postives = 52/83 (62.65%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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