Cp4.1LG11g09610.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTCCTCACATGATGTTATCCCAGAAGTTTTGATCACAGATAATCATCATTTTCATACTGCTTAAATGAATCCATCTTTGCATTAGAAAAATTACTTGCCCAGATTTATAAACCTTTGATTACTCTATCACAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA ATGAATATTTATAAACCTTTGATTACTCTATCACAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA ATGAATATTTATAAACCTTTGATTACTCTATCACAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA MNIYKPLITLSQAHYAPRSFFGVEDFVDDDNSRPYTYQKGKKSKNPKKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCKQVAVAGTNSKDIKAVLQSRSDIPACLAVGRILSERAKEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLE
BLAST of Cp4.1LG11g09610.1 vs. TrEMBL
Match: A0A0A0LLI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013320 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 4.3e-74 Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TrEMBL
Match: A0A151SF91_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_024638 PE=4 SV=1) HSP 1 Score: 282.7 bits (722), Expect = 2.8e-73 Identity = 142/162 (87.65%), Postives = 152/162 (93.83%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TrEMBL
Match: A0A0I9QQ14_MEDSA (L18 ribosomal protein Heart Stopper OS=Medicago sativa GN=Heart Stopper PE=2 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 8.1e-73 Identity = 140/151 (92.72%), Postives = 147/151 (97.35%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TrEMBL
Match: A0A0S3SUE1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G340400 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 8.1e-73 Identity = 140/162 (86.42%), Postives = 152/162 (93.83%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TrEMBL
Match: A0A0S3SIT6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G161500 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.4e-72 Identity = 140/163 (85.89%), Postives = 153/163 (93.87%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TAIR10
Match: AT1G08845.2 (AT1G08845.2 Ribosomal L18p/L5e family protein) HSP 1 Score: 270.0 bits (689), Expect = 9.4e-73 Identity = 132/148 (89.19%), Postives = 144/148 (97.30%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein) HSP 1 Score: 110.9 bits (276), Expect = 7.3e-25 Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. TAIR10
Match: AT3G20230.1 (AT3G20230.1 Ribosomal L18p/L5e family protein) HSP 1 Score: 104.0 bits (258), Expect = 8.9e-23 Identity = 50/117 (42.74%), Postives = 81/117 (69.23%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. NCBI nr
Match: gi|659070510|ref|XP_008455473.1| (PREDICTED: uncharacterized protein LOC103495625 [Cucumis melo]) HSP 1 Score: 285.8 bits (730), Expect = 4.7e-74 Identity = 143/151 (94.70%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. NCBI nr
Match: gi|449442869|ref|XP_004139203.1| (PREDICTED: uncharacterized protein LOC101215592 [Cucumis sativus]) HSP 1 Score: 285.4 bits (729), Expect = 6.1e-74 Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. NCBI nr
Match: gi|1012342305|gb|KYP53500.1| (hypothetical protein KK1_024638 [Cajanus cajan]) HSP 1 Score: 282.7 bits (722), Expect = 4.0e-73 Identity = 142/162 (87.65%), Postives = 152/162 (93.83%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. NCBI nr
Match: gi|965609967|dbj|BAT96458.1| (hypothetical protein VIGAN_08340400 [Vigna angularis var. angularis]) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 140/162 (86.42%), Postives = 152/162 (93.83%), Query Frame = 1
BLAST of Cp4.1LG11g09610.1 vs. NCBI nr
Match: gi|899131465|tpg|DAA64882.1| (TPA_inf: L18 ribosomal protein Heart Stopper [Medicago sativa]) HSP 1 Score: 281.2 bits (718), Expect = 1.2e-72 Identity = 140/151 (92.72%), Postives = 147/151 (97.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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