Cp4.1LG11g09600.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATTGGACTTCAATCCGAAAATATGAGATTGTTGTAATGTAACAAAATAGAAACCCTAATTTATGAATTGAGACTCGAGAGACCTAAAGGGCTATAAGGAACCAAATCGAACGAAGGTGAAGTGCTGGTGAAAATGGCGAGGAGACGGGCTGCATCAATCTTTGTTCTTTTACATATTGGTCTCTCTTTTCTTAGCTTTTGAGCCAAAATCAACCGCGCTGATCTTCGCTTTCTCCCCCGTTTAATTTGTCTCTCAACGAACTGGCAGCTGATCGTTAACTTATTGCAGAAGCTGTGGAAGAAGTTTGAATTATTGAAGAAATTTGTTTCGCCATTCTCCCCTTCATTTTTATCCTATTGGGTATTCTCTATCAGCTCCTCATACTAATTTCTTTGTTTTCTTGATGGAGTTTTGGTTATGGATTGCCAATAATGCACGTANATTAATTTCTTTGTTTTCTTGATGGGGTTTTGGTTATGGATTGCCAATAATGCACGTAACTTGTTCGGNACTAATTTCTTTGTTTTCTTGATGGAGTTTTGGTTATGGATTGCCAATAATGCACGTAACTTGTTCGGATTCATGGCTTCTTCCATTTGTTACTCGCTTTTGATATTTGAAATGTTCGATAGAAGGAATTATGTATTGCCTGCTAACTGTTCGACAAAATGCCTCATAGAGGTTGAATCTGTATGTGTGTTCTTCCGTGATGAATTTAAGCCTTCTCCAGTGTACCCGATGTTTATTTAGTAGTTTAATCCGTTTATTTACTCCTGAGATACTTCATGTGATTTGGGTGCTCATAGGAGTTGAAATCGGGTTCTTTCAGTACAAAAGCGGGGTTGGCTAGTAGAAGGAGGAAAAGATGTTGAAACACTTGCTTGGAAACATGCGGAAACATGCGGTTTGTGCATGTGAAGTAAACAGGGCCAGGCCTTATTTGTTTGTGCCAACAAGTGACTTTCATAAGGGGGAGGTAAGAATTTCTTCCCTTAGTTATCTATATGTTTGTTTTTAAATGTACATATTATTTTTTCTAATAAGCAAAACCTCCAAAATAAGATACTACACACAATACATCTTCAAAGTCACAATATTTCACTCTTTGCATAATTTACATAATGAGGTAACATAGACTTTCACCAAAAAGGAATTTTACCCAGTAGTAATTTACTGGATTGAATAGTTTTGAAAAGCTTTGGATGGATCACAAGGAGGAGCCATATGAAGCTTGATTGATTCAAAGGTTTCTTCCCATGAGGAGCATTTGTTGTCAAAGATCTTCTTCTAAAACCAAATTCCCTTTGGTACTTGACAATTTTGATCCAAAGAATCCAAGCTTTTCCTTCGACACCGTGACTGCTTAAGGAACCGTATATGTTACTTCTAGCTTTAGCACTGAAACTAATGGCCTAATCTCTTACAGATAACTTAAGAGATACCTCCCAGAAGCTTTACATAGGAGCTGGGAGTTCATAGAATTTAGGATATGGATACCATATCATCCACTACGAGTTGACCCAATAATCATATAGCGAAGTTGTTATCTTAGATGTTGTAATGGCTAACAAGGGCTTTAGCCTAGTCTTTTTCGGTTTTCTTGTTTCGGTTATTGGTTTCTTGTTTTTGTGAGGAACAGGCTTGTTAGTTAGTTGTCGACTTGTGGCGGATTCTCTTAGTCGTTTTTTATAGCTGTTATTGTAGTTAGTTAGGTGGCTGGACATTATCTCCTATAAACTGGGGGTCTTACCAAAGGTGCAAGGAAAATTTCAGAAAACTAATGAAGATTTCTACGCCTTTGTAACGGAATTACATCTAAGACATCTATGAGGTGTCAACTTCAAACTAGGTAACTAGAATTATAAATATTCTACGAGTTTTCAATATCAACTGTCGAGAGCTTCTGTGAGATCCTACATTGGTTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGAGATCCTACATTAGTAGACGAGTGAAAGCCAGGAAAGGAAAGCTCAAAGAGGACAATATATGCTAGCGGCGGACTTGGGCCGTTACAGCTTCACGGTAATCCTTATATAAGTTTTGCCTAGGACACCAACAATGATAGAGAAATCACATATTCAAATTTAATCAATATTTGCATCCCTATATCCTCTTATTGGCTACTCTTTTGACTTCTACATGAATGTCCTCACATGATGTTATCCCAGAAGTTTTGATCACAGATAATCATCATTTTCATACTGCTTAAATGAATCCATCTTTGCATTAGAAAAATTACTTGCCCAGATTTATAAACCTTTGATTACTCTATCACAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA TATTGGACTTCAATCCGAAAATATGAGATTGTTGTAATGTAACAAAATAGAAACCCTAATTTATGAATTGAGACTCGAGAGACCTAAAGGGCTATAAGGAACCAAATCGAACGAAGGTGAAGTGCTGGTGAAAATGGCGAGGAGACGGGCTGCATCAATCTTTGTTCTTTTACATATTGGTCTCTCTTTTCTTAGCTTTTGAGCCAAAATCAACCGCGCTGATCTTCGCTTTCTCCCCCGTTTAATTTGTCTCTCAACGAACTGGCAGCTGATCGTTAACTTATTGCAGAAGCTGTGGAAGAAGTTTGAATTATTGAAGAAATTTGTTTCGCCATTCTCCCCTTCATTTTTATCCTATTGGGAGTTGAAATCGGGTTCTTTCAGTACAAAAGCGGGGTTGGCTAGTAGAAGGAGGAAAAGATGTTGAAACACTTGCTTGGAAACATGCGGAAACATGCGGTTTGTGCATGTGAAGTAAACAGGGCCAGGCCTTATTTGTTTGTGCCAACAAGTGACTTTCATAAGGGGGAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA ATGTTGAAACACTTGCTTGGAAACATGCGGAAACATGCGGTTTGTGCATGTGAAGTAAACAGGGCCAGGCCTTATTTGTTTGTGCCAACAAGTGACTTTCATAAGGGGGAGGCTCATTATGCACCCAGAAGTTTCTTTGGTGTGGAGGACTTCGTCGACGATGATAATAGTCGGCCATACACATACCAAAAGGGGAAGAAATCCAAAAATCCAAAAAAGCACATATCATTCAAACAACGGACGGTAGCCTACATGGAGCCATTTACACTCGACGTGTTCATCTCGAAGCGGTTTGTTTCAGCATCGCTCACGCACAGGGTGACTTGTAAACAAGTTGCAGTTGCAGGTACGAACTCGAAAGATATCAAAGCTGTTCTTCAGTCTCGTTCGGACATTCCTGCTTGTTTGGCTGTAGGCCGTATTTTATCTGAGAGGGCTAAAGAAGCTGATGTTTATACTGCTAGTTATACTCCTAGAGAGAGAGATAAATTTGAAGGCAAAATAAGAGCTGTGGTTCAGTCTCTTATTGATAATGGGATTGATGTAAAAATCTATCTGGAGTAA MLKHLLGNMRKHAVCACEVNRARPYLFVPTSDFHKGEAHYAPRSFFGVEDFVDDDNSRPYTYQKGKKSKNPKKHISFKQRTVAYMEPFTLDVFISKRFVSASLTHRVTCKQVAVAGTNSKDIKAVLQSRSDIPACLAVGRILSERAKEADVYTASYTPRERDKFEGKIRAVVQSLIDNGIDVKIYLE
BLAST of Cp4.1LG11g09600.1 vs. TrEMBL
Match: A0A0A0LLI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G013320 PE=4 SV=1) HSP 1 Score: 355.9 bits (912), Expect = 3.0e-95 Identity = 175/187 (93.58%), Postives = 180/187 (96.26%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TrEMBL
Match: K7KJN0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G122100 PE=4 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 9.9e-83 Identity = 153/187 (81.82%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TrEMBL
Match: A0A0B2S3H0_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_017300 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.8e-82 Identity = 152/187 (81.28%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TrEMBL
Match: I1KFI3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G309500 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.8e-82 Identity = 152/187 (81.28%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TrEMBL
Match: A0A0R0JVC6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G309500 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 3.8e-82 Identity = 152/187 (81.28%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TAIR10
Match: AT1G08845.2 (AT1G08845.2 Ribosomal L18p/L5e family protein) HSP 1 Score: 284.3 bits (726), Expect = 5.6e-77 Identity = 142/189 (75.13%), Postives = 163/189 (86.24%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein) HSP 1 Score: 110.9 bits (276), Expect = 8.4e-25 Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. TAIR10
Match: AT3G20230.1 (AT3G20230.1 Ribosomal L18p/L5e family protein) HSP 1 Score: 104.0 bits (258), Expect = 1.0e-22 Identity = 50/117 (42.74%), Postives = 81/117 (69.23%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. NCBI nr
Match: gi|449442869|ref|XP_004139203.1| (PREDICTED: uncharacterized protein LOC101215592 [Cucumis sativus]) HSP 1 Score: 355.9 bits (912), Expect = 4.3e-95 Identity = 175/187 (93.58%), Postives = 180/187 (96.26%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. NCBI nr
Match: gi|659070510|ref|XP_008455473.1| (PREDICTED: uncharacterized protein LOC103495625 [Cucumis melo]) HSP 1 Score: 353.6 bits (906), Expect = 2.1e-94 Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. NCBI nr
Match: gi|356508210|ref|XP_003522852.1| (PREDICTED: 50S ribosomal protein L18 [Glycine max]) HSP 1 Score: 314.3 bits (804), Expect = 1.4e-82 Identity = 153/187 (81.82%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. NCBI nr
Match: gi|947107812|gb|KRH56195.1| (hypothetical protein GLYMA_06G309500 [Glycine max]) HSP 1 Score: 312.4 bits (799), Expect = 5.4e-82 Identity = 152/187 (81.28%), Postives = 171/187 (91.44%), Query Frame = 1
BLAST of Cp4.1LG11g09600.1 vs. NCBI nr
Match: gi|356517682|ref|XP_003527515.1| (PREDICTED: 50S ribosomal protein L18 [Glycine max]) HSP 1 Score: 312.4 bits (799), Expect = 5.4e-82 Identity = 152/187 (81.28%), Postives = 171/187 (91.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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