Cp4.1LG07g09460.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGGAATTGAGCTTCTGGCCATGGACTGAAAACCACTTGAGTGGCCTGGCCTGGCCTACCCACCTTTGATAAATATGGCAAACTAGTTGGCCTGGCCACTGTGGATAGAATTTCTGTTTATTATTGATCAGCCACTTGAATGTTGTTGATCTAATGGATCATAGGACTGCCTTGTCACAGGGAGGCTAGAGGCTATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAACTATTTTGACCGTTCTTCGTGAAGCAATTTATATGTATGTTTTTATTTTTTAGTTTTTACCATGCAATGTGGATTTAATGGCAGGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACGTGAGCGGAATTTTTGCATACCTCTTATTCGAAAAGCTTTAAAAGGAGTCTTTCAGATTTCTTTTTACTACCTTACATAAGTCATGGCTGGATTTTTTCTTCCTTTATCATAGATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTAAGCAATTTCCCGTTCGAGTTTTTTTCTATCGATTAGTACTGACCGAATCGGTCTATTGTGTTCCCAATTGAGAGATTTGTATTTTGTATCTGTGTCTTAGGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTAAGTGGCTCTTCGTTTCCGATCGCTCGTATCTTCTGCTTCGTTAATTTTAATGTTCTAGGGAAGTTTATTGGGGGAAAGCATGTCATAGGAGATAGTTCTTCTTGTGAAGGGCGTATAACGTTTGCACATTCTTTGTTCATCATTCATAAATTTGACCGAGCTTCATGTCGGTGCTGGCTGCACGGGTCCTTTATTAGATCACATTGATTGTCTAATGATTCATTTCTCCTGCAATCTTATAAAATATGAGGTAGGAAGGTCGATAGCAGAATGTTTTGAGTTGAGTAGTCCTGGAAAGACGTGTGAGATTGCGTTAGATTTAAGGCCTCGCTTTCTGTAATTATTAGCGTGACTAGATTCTTCTGGGCTGGAGTGACTTTCTTTGAGTGGATTCCCTTTGTAGGGCTATTGATTTTGTATTGCCCTTGTATATTCATTCATTGAAAGCTTGGTTTCTTTCTTAAAAAGACTCTAATGGAAAGCATTAGAGGTCCATCGCCAAGAGAGCTAGCTCCCGGTTCACCGGATTCCCTATACCGAGCCTGTTTCTCACGTCTTGGGGCACTTAGATAGCATTTTAAACAAACAAATAAGATATATAGAATTCCTACTGAAGACTGATTGTGTCCACCGCTAGCATATATTGTCCTCTTTGTGCTTTCCTTTTCGATTTTCCCTTAAGGTTTTTAAAATGCGTCTGCTAGGGAGAAGTTTTCACACCCTTATAAATAATGTTTCGTTCTCCTCCCCAACTGATGTGAGATGTCACAATCCACCCCCCTTCAGGGCTCAGTTTCCTCGCTGACACTTGTTTTCTTCTCCAATCGATGTGGGATCCCCCCAATCCACTCCCTTTCGTGCCCAGCGTCCTTACTAACACATCGCCTTCTATCCACCCCCTTTGAGGCTCAGCCTCCTCACTGGCACATTACTCGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCATCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCCTTCAAGGCTTTTGAAACGCGCCTGCTAGGGAGAGATTTTCACACTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTAATGTGAGATCTCACAGATTGGATTATAGTTACCAAACCTTCCACTACTAGAGAAGAATGTTCCTTCCAAGCCGTTTCACAAGATCCCAGATAGAACGAGACCTAGGATTTTGACCCAACTGAAGTCATAAACAAGTCATCTAATGATCGACTTGAGACGGGGCTGGGGTTGGGAAAGTTGTGTTTTTGTATATTTCTCTTTGAGCGTTTTACACCCAAGATAACAGCTGAAAAGTACCCACATTTCTAAATACAGGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGGTAAGCTCTCTCTGCCTCTTCTGCGCACAGCAATTGTTATACTCATTATAACCATGCGTTTGATACCCCTTACTGTCATGGAATATCTCCTTCATTTTTGGCTAATAACTCGAGCTTTATGTTTCCTCTGTGTGTTCTTTGTACCTCTATGATATGACTTCGTCAGCTTTTGTCCCAAAATGAAAGTTAAATTATCATTATAGTCTCTGAACTTCGAGTAACAGCTCAAGCCTACCGCTACTAGATATTGTTCTCTTTGAGCTTTCTATTTTGAAAACACGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAATCGATGTGGGATCTCACCGTTAAGGTGGGGAAATGAGATCCCACATCGATTGCAGAGGAGAACGAAACATTCTTTATAAAGGTGTGGGAACCTCTCTCTAGTAGACGTGTTTTAAGAACCTCGAGGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGCGGTGGGCTTGAGCTTGGGCTGTTACATCCTTGTTCCTTCTTTAATGTGTTTTATGTTGATTTGGTATCTGGTAAAATAGTAACAAAACCTGACATGGCACCATGTAGAAGTTGACACGTTACCACATCAACTTCTTATACGCACGAAACAATATGGCATAGTCTCGAGGTCTATTTCCACATGGTGCCATGTCAGGACCGAAACGAACTAAAGTAGCGACGATCAAAGCGTTTAATGAAGTCTAAAGTATGCAGACCAGAAGTATAATTCCTCACAAACTTAAAACAAAAGCAACAACTCACCTAGAATTCCTCGCATTCCCGTCGTTTTTCGAGCTAATTTTTGTCCTTTTCTTTCGTTAAACAGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAACTTTTCCTCCTTTGAACTGTACGTCTCTCTTTCTCTCTCTAGGATTAAGTGTTTAGCAACTGGTAGTTGATATCAATTCATTTCCTTGTGATTTTTCCCTATGAAAGTTCTTCTGTTTCCATAAACTCCTAAATATGGGAAGCGATGTATTTTTAAGCCTAATTTAATGATGGCCCAGCTACAATAGATAGATATAAGAGATCTTCATGTTCTTCTTTCACTATGATTGATTCTCATGCTTCCAATATCGGGTTCAAACTGGTCGTCAAATGAAGAATTTGACAAATGCCGAGCCTCCCGTGGAGGCAAGTGAAGTTGGTGAGCTGTATGTTAGGTGTCACAGTCATATTCGTCTAGAGTGTGTTGCCTATGACCGCATGCTCATGCTGAGCCAAACCCTTTTTCTTTCCATGTTGTAATGCTTTCATTTTGTATTTTTAGGAGGTATGACTCGAAAAAAATCATGTCTAGGCCTGTCAGACATGAAATGCCTCAAAATGTACTAGGGGATATGACAAGTTGTCAACTTAATGCCTCAAAATGGACTAGGGGATATGACTCGTTGTCAACTTATTCATGCCTCAAAATGTACCCGGGAATATGACTAGTTGTCAACTTATTCCTGT AGGGAATTGAGCTTCTGGCCATGGACTGAAAACCACTTGAGTGGCCTGGCCTGGCCTACCCACCTTTGATAAATATGGCAAACTAGTTGGCCTGGCCACTGTGGATAGAATTTCTGTTTATTATTGATCAGCCACTTGAATGTTGTTGATCTAATGGATCATAGGACTGCCTTGTCACAGGGAGGCTAGAGGCTATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAACTTTTCCTCCTTTGAACTGTACGTCTCTCTTTCTCTCTCTAGGATTAAGTGTTTAGCAACTGGTAGTTGATATCAATTCATTTCCTTGTGATTTTTCCCTATGAAAGTTCTTCTGTTTCCATAAACTCCTAAATATGGGAAGCGATGTATTTTTAAGCCTAATTTAATGATGGCCCAGCTACAATAGATAGATATAAGAGATCTTCATGTTCTTCTTTCACTATGATTGATTCTCATGCTTCCAATATCGGGTTCAAACTGGTCGTCAAATGAAGAATTTGACAAATGCCGAGCCTCCCGTGGAGGCAAGTGAAGTTGGTGAGCTGTATGTTAGGTGTCACAGTCATATTCGTCTAGAGTGTGTTGCCTATGACCGCATGCTCATGCTGAGCCAAACCCTTTTTCTTTCCATGTTGTAATGCTTTCATTTTGTATTTTTAGGAGGTATGACTCGAAAAAAATCATGTCTAGGCCTGTCAGACATGAAATGCCTCAAAATGTACTAGGGGATATGACAAGTTGTCAACTTAATGCCTCAAAATGGACTAGGGGATATGACTCGTTGTCAACTTATTCATGCCTCAAAATGTACCCGGGAATATGACTAGTTGTCAACTTATTCCTGT ATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAA MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMADHDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKYYASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAPQKLSLLSSVLKSLKVSP
BLAST of Cp4.1LG07g09460.1 vs. Swiss-Prot
Match: EMC2_BOVIN (ER membrane protein complex subunit 2 OS=Bos taurus GN=EMC2 PE=2 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.5e-31 Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. Swiss-Prot
Match: EMC2_MOUSE (ER membrane protein complex subunit 2 OS=Mus musculus GN=Emc2 PE=1 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 4.6e-31 Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. Swiss-Prot
Match: EMC2_HUMAN (ER membrane protein complex subunit 2 OS=Homo sapiens GN=EMC2 PE=1 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 7.8e-31 Identity = 76/202 (37.62%), Postives = 119/202 (58.91%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. Swiss-Prot
Match: EMC2_PONAB (ER membrane protein complex subunit 2 OS=Pongo abelii GN=EMC2 PE=2 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 7.8e-31 Identity = 76/202 (37.62%), Postives = 119/202 (58.91%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. Swiss-Prot
Match: EMC2_DANRE (ER membrane protein complex subunit 2 OS=Danio rerio GN=emc2 PE=2 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.0e-30 Identity = 75/202 (37.13%), Postives = 121/202 (59.90%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TrEMBL
Match: A0A0A0LFJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011580 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 5.3e-95 Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TrEMBL
Match: A0A061F258_THECC (Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_026387 PE=4 SV=1) HSP 1 Score: 337.4 bits (864), Expect = 1.2e-89 Identity = 169/195 (86.67%), Postives = 183/195 (93.85%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TrEMBL
Match: K7WVC7_SOLTU (O-linked GlcNAc transferase OS=Solanum tuberosum GN=PGSC0003DMG400022512 PE=2 SV=1) HSP 1 Score: 335.5 bits (859), Expect = 4.4e-89 Identity = 166/195 (85.13%), Postives = 184/195 (94.36%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TrEMBL
Match: M5VZE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009192mg PE=4 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 4.8e-88 Identity = 168/196 (85.71%), Postives = 180/196 (91.84%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TrEMBL
Match: K4B0G1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.3e-88 Identity = 164/195 (84.10%), Postives = 184/195 (94.36%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TAIR10
Match: AT3G04830.1 (AT3G04830.1 Protein prenylyltransferase superfamily protein) HSP 1 Score: 308.5 bits (789), Expect = 2.9e-84 Identity = 151/198 (76.26%), Postives = 181/198 (91.41%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. TAIR10
Match: AT5G28220.1 (AT5G28220.1 Protein prenylyltransferase superfamily protein) HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80 Identity = 147/197 (74.62%), Postives = 172/197 (87.31%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. NCBI nr
Match: gi|449442911|ref|XP_004139224.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis sativus]) HSP 1 Score: 355.1 bits (910), Expect = 7.7e-95 Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. NCBI nr
Match: gi|659070601|ref|XP_008455808.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis melo]) HSP 1 Score: 355.1 bits (910), Expect = 7.7e-95 Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. NCBI nr
Match: gi|590642775|ref|XP_007030614.1| (Prenylyltransferase superfamily protein [Theobroma cacao]) HSP 1 Score: 337.4 bits (864), Expect = 1.7e-89 Identity = 169/195 (86.67%), Postives = 183/195 (93.85%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. NCBI nr
Match: gi|568815686|ref|NP_001275602.1| (uncharacterized protein LOC102596649 [Solanum tuberosum]) HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89 Identity = 166/195 (85.13%), Postives = 184/195 (94.36%), Query Frame = 1
BLAST of Cp4.1LG07g09460.1 vs. NCBI nr
Match: gi|658030381|ref|XP_008350632.1| (PREDICTED: ER membrane protein complex subunit 2-like [Malus domestica]) HSP 1 Score: 333.2 bits (853), Expect = 3.1e-88 Identity = 169/196 (86.22%), Postives = 182/196 (92.86%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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