Cp4.1LG07g09460 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g09460
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTetratricopeptide repeat protein 35
LocationCp4.1LG07 : 8588821 .. 8592758 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGAATTGAGCTTCTGGCCATGGACTGAAAACCACTTGAGTGGCCTGGCCTGGCCTACCCACCTTTGATAAATATGGCAAACTAGTTGGCCTGGCCACTGTGGATAGAATTTCTGTTTATTATTGATCAGCCACTTGAATGTTGTTGATCTAATGGATCATAGGACTGCCTTGTCACAGGGAGGCTAGAGGCTATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAACTATTTTGACCGTTCTTCGTGAAGCAATTTATATGTATGTTTTTATTTTTTAGTTTTTACCATGCAATGTGGATTTAATGGCAGGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACGTGAGCGGAATTTTTGCATACCTCTTATTCGAAAAGCTTTAAAAGGAGTCTTTCAGATTTCTTTTTACTACCTTACATAAGTCATGGCTGGATTTTTTCTTCCTTTATCATAGATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTAAGCAATTTCCCGTTCGAGTTTTTTTCTATCGATTAGTACTGACCGAATCGGTCTATTGTGTTCCCAATTGAGAGATTTGTATTTTGTATCTGTGTCTTAGGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTAAGTGGCTCTTCGTTTCCGATCGCTCGTATCTTCTGCTTCGTTAATTTTAATGTTCTAGGGAAGTTTATTGGGGGAAAGCATGTCATAGGAGATAGTTCTTCTTGTGAAGGGCGTATAACGTTTGCACATTCTTTGTTCATCATTCATAAATTTGACCGAGCTTCATGTCGGTGCTGGCTGCACGGGTCCTTTATTAGATCACATTGATTGTCTAATGATTCATTTCTCCTGCAATCTTATAAAATATGAGGTAGGAAGGTCGATAGCAGAATGTTTTGAGTTGAGTAGTCCTGGAAAGACGTGTGAGATTGCGTTAGATTTAAGGCCTCGCTTTCTGTAATTATTAGCGTGACTAGATTCTTCTGGGCTGGAGTGACTTTCTTTGAGTGGATTCCCTTTGTAGGGCTATTGATTTTGTATTGCCCTTGTATATTCATTCATTGAAAGCTTGGTTTCTTTCTTAAAAAGACTCTAATGGAAAGCATTAGAGGTCCATCGCCAAGAGAGCTAGCTCCCGGTTCACCGGATTCCCTATACCGAGCCTGTTTCTCACGTCTTGGGGCACTTAGATAGCATTTTAAACAAACAAATAAGATATATAGAATTCCTACTGAAGACTGATTGTGTCCACCGCTAGCATATATTGTCCTCTTTGTGCTTTCCTTTTCGATTTTCCCTTAAGGTTTTTAAAATGCGTCTGCTAGGGAGAAGTTTTCACACCCTTATAAATAATGTTTCGTTCTCCTCCCCAACTGATGTGAGATGTCACAATCCACCCCCCTTCAGGGCTCAGTTTCCTCGCTGACACTTGTTTTCTTCTCCAATCGATGTGGGATCCCCCCAATCCACTCCCTTTCGTGCCCAGCGTCCTTACTAACACATCGCCTTCTATCCACCCCCTTTGAGGCTCAGCCTCCTCACTGGCACATTACTCGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCATCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCTTTTCGGGCTTCCCTTCAAGGCTTTTGAAACGCGCCTGCTAGGGAGAGATTTTCACACTCTTATAAAGAATGTTTCGTTCTCCTCCCCAACTAATGTGAGATCTCACAGATTGGATTATAGTTACCAAACCTTCCACTACTAGAGAAGAATGTTCCTTCCAAGCCGTTTCACAAGATCCCAGATAGAACGAGACCTAGGATTTTGACCCAACTGAAGTCATAAACAAGTCATCTAATGATCGACTTGAGACGGGGCTGGGGTTGGGAAAGTTGTGTTTTTGTATATTTCTCTTTGAGCGTTTTACACCCAAGATAACAGCTGAAAAGTACCCACATTTCTAAATACAGGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGGTAAGCTCTCTCTGCCTCTTCTGCGCACAGCAATTGTTATACTCATTATAACCATGCGTTTGATACCCCTTACTGTCATGGAATATCTCCTTCATTTTTGGCTAATAACTCGAGCTTTATGTTTCCTCTGTGTGTTCTTTGTACCTCTATGATATGACTTCGTCAGCTTTTGTCCCAAAATGAAAGTTAAATTATCATTATAGTCTCTGAACTTCGAGTAACAGCTCAAGCCTACCGCTACTAGATATTGTTCTCTTTGAGCTTTCTATTTTGAAAACACGTCTGCTAGGGAGAGGTTTTCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAATCGATGTGGGATCTCACCGTTAAGGTGGGGAAATGAGATCCCACATCGATTGCAGAGGAGAACGAAACATTCTTTATAAAGGTGTGGGAACCTCTCTCTAGTAGACGTGTTTTAAGAACCTCGAGGGGAAAGCTCAAAGAGGACAATATCTGCTAGCGCGGTGGGCTTGAGCTTGGGCTGTTACATCCTTGTTCCTTCTTTAATGTGTTTTATGTTGATTTGGTATCTGGTAAAATAGTAACAAAACCTGACATGGCACCATGTAGAAGTTGACACGTTACCACATCAACTTCTTATACGCACGAAACAATATGGCATAGTCTCGAGGTCTATTTCCACATGGTGCCATGTCAGGACCGAAACGAACTAAAGTAGCGACGATCAAAGCGTTTAATGAAGTCTAAAGTATGCAGACCAGAAGTATAATTCCTCACAAACTTAAAACAAAAGCAACAACTCACCTAGAATTCCTCGCATTCCCGTCGTTTTTCGAGCTAATTTTTGTCCTTTTCTTTCGTTAAACAGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAACTTTTCCTCCTTTGAACTGTACGTCTCTCTTTCTCTCTCTAGGATTAAGTGTTTAGCAACTGGTAGTTGATATCAATTCATTTCCTTGTGATTTTTCCCTATGAAAGTTCTTCTGTTTCCATAAACTCCTAAATATGGGAAGCGATGTATTTTTAAGCCTAATTTAATGATGGCCCAGCTACAATAGATAGATATAAGAGATCTTCATGTTCTTCTTTCACTATGATTGATTCTCATGCTTCCAATATCGGGTTCAAACTGGTCGTCAAATGAAGAATTTGACAAATGCCGAGCCTCCCGTGGAGGCAAGTGAAGTTGGTGAGCTGTATGTTAGGTGTCACAGTCATATTCGTCTAGAGTGTGTTGCCTATGACCGCATGCTCATGCTGAGCCAAACCCTTTTTCTTTCCATGTTGTAATGCTTTCATTTTGTATTTTTAGGAGGTATGACTCGAAAAAAATCATGTCTAGGCCTGTCAGACATGAAATGCCTCAAAATGTACTAGGGGATATGACAAGTTGTCAACTTAATGCCTCAAAATGGACTAGGGGATATGACTCGTTGTCAACTTATTCATGCCTCAAAATGTACCCGGGAATATGACTAGTTGTCAACTTATTCCTGT

mRNA sequence

AGGGAATTGAGCTTCTGGCCATGGACTGAAAACCACTTGAGTGGCCTGGCCTGGCCTACCCACCTTTGATAAATATGGCAAACTAGTTGGCCTGGCCACTGTGGATAGAATTTCTGTTTATTATTGATCAGCCACTTGAATGTTGTTGATCTAATGGATCATAGGACTGCCTTGTCACAGGGAGGCTAGAGGCTATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAACTTTTCCTCCTTTGAACTGTACGTCTCTCTTTCTCTCTCTAGGATTAAGTGTTTAGCAACTGGTAGTTGATATCAATTCATTTCCTTGTGATTTTTCCCTATGAAAGTTCTTCTGTTTCCATAAACTCCTAAATATGGGAAGCGATGTATTTTTAAGCCTAATTTAATGATGGCCCAGCTACAATAGATAGATATAAGAGATCTTCATGTTCTTCTTTCACTATGATTGATTCTCATGCTTCCAATATCGGGTTCAAACTGGTCGTCAAATGAAGAATTTGACAAATGCCGAGCCTCCCGTGGAGGCAAGTGAAGTTGGTGAGCTGTATGTTAGGTGTCACAGTCATATTCGTCTAGAGTGTGTTGCCTATGACCGCATGCTCATGCTGAGCCAAACCCTTTTTCTTTCCATGTTGTAATGCTTTCATTTTGTATTTTTAGGAGGTATGACTCGAAAAAAATCATGTCTAGGCCTGTCAGACATGAAATGCCTCAAAATGTACTAGGGGATATGACAAGTTGTCAACTTAATGCCTCAAAATGGACTAGGGGATATGACTCGTTGTCAACTTATTCATGCCTCAAAATGTACCCGGGAATATGACTAGTTGTCAACTTATTCCTGT

Coding sequence (CDS)

ATGCTGCTTGAAGCAAAGGGACTTTGGTCCGAGGCAGAAAAAGCTTACACCAGCCTTTTGGAGGAAAACCCGTTTGATCAAGTAGTACAGAAAAGGAGGGTTGCTCTGGCGAAAGCACAAGGCAACACTGCTGGGGCTATCGAACGCCTCAACAAATATCTTGAAACATTTATGGCTGATCATGATGCCTGGAGAGAACTAGCTGAATTATATATTTCTCTCAAAATGTACAAGCAAGCAGTTTTTTGCTATGAGGAGCTGATATTATCTCAGCCCACAGTTCCTCTGCATCACTTGGCTTATGCAGATGTACTTTACACACTAGGCGGCCTAGAAAACCTTCAGACAGCAAAGAAATACTATGCATCTACTATAGACTTGACTGGAGGCAAAAATACGAGAGCCCTGTTCGGCATTTGCTTGTGTACTTCTGCCATTGCACAACTGAGTAGAGGCCGAAACAAGGAAGACAAGGAGGGTCCAGAGCTGCAGTCTTTAGCAGCAACAGCCTTGGAAAAAGATTACAAGCAAAGAGCTCCACAGAAGCTTTCTCTGCTTTCTTCTGTATTGAAGAGCTTGAAAGTGTCTCCATAA

Protein sequence

MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMADHDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKYYASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAPQKLSLLSSVLKSLKVSP
Homology
[Close]
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match: EMC2_BOVIN (ER membrane protein complex subunit 2 OS=Bos taurus GN=EMC2 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.5e-31
Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           M  EA   + +A + Y  +L+E+P +   +KR++A+ KAQG    AI  LN+YLE F+ D
Sbjct: 95  MRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGD 154

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
            +AW ELAELYI+   Y +A FC EEL+++ P   L+   YA+V YT GGLENL+ ++KY
Sbjct: 155 QEAWHELAELYINEHDYAKAAFCLEELMMTNPYNHLYCQQYAEVKYTQGGLENLELSRKY 214

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDY----- 180
           +A  + L   +N RALFG+ +  S IA   +   K  K+  +  S AA+ + K Y     
Sbjct: 215 FAQALKL-NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINKAYQFAGR 274

Query: 181 -KQRAPQKLSLLSSVLKSLKVS 197
            K+     L  +  +L++L+++
Sbjct: 275 SKKETKYSLKAVEDMLETLQIT 295

[Close]
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match: EMC2_MOUSE (ER membrane protein complex subunit 2 OS=Mus musculus GN=Emc2 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.6e-31
Identity = 77/202 (38.12%), Postives = 119/202 (58.91%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           M  EA   + +A + Y  +L+E+P +   +KR++A+ KAQG T  AI  LN+YLE F+ D
Sbjct: 95  MRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKTVEAIRELNEYLEQFVGD 154

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
            +AW ELAELYI+   Y +A FC EEL+++ P   L+   YA+V YT GGLENL+ ++KY
Sbjct: 155 QEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKY 214

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDY----- 180
           +A  + L   +N RALFG+ +  S IA   +   K  K+  +  S AA  + + Y     
Sbjct: 215 FAQALKL-NNRNMRALFGLYMSASHIASNPKASAKMKKDNIKYASWAANQINRAYQFAGR 274

Query: 181 -KQRAPQKLSLLSSVLKSLKVS 197
            K+     L  +  +L++L+++
Sbjct: 275 SKKETKYSLKAVEDMLETLQIT 295

[Close]
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match: EMC2_HUMAN (ER membrane protein complex subunit 2 OS=Homo sapiens GN=EMC2 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.8e-31
Identity = 76/202 (37.62%), Postives = 119/202 (58.91%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           M  EA   + +A + Y  +L+E+P +   +KR++A+ KAQG    AI  LN+YLE F+ D
Sbjct: 95  MRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGD 154

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
            +AW ELAELYI+   Y +A FC EEL+++ P   L+   YA+V YT GGLENL+ ++KY
Sbjct: 155 QEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKY 214

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDY----- 180
           +A  + L   +N RALFG+ +  S IA   +   K  K+  +  S AA+ + + Y     
Sbjct: 215 FAQALKL-NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQFAGR 274

Query: 181 -KQRAPQKLSLLSSVLKSLKVS 197
            K+     L  +  +L++L+++
Sbjct: 275 SKKETKYSLKAVEDMLETLQIT 295

[Close]
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match: EMC2_PONAB (ER membrane protein complex subunit 2 OS=Pongo abelii GN=EMC2 PE=2 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.8e-31
Identity = 76/202 (37.62%), Postives = 119/202 (58.91%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           M  EA   + +A + Y  +L+E+P +   +KR++A+ KAQG    AI  LN+YLE F+ D
Sbjct: 95  MRFEAMERYDDAIQLYDRILQEDPTNTAARKRKIAIRKAQGKNVEAIRELNEYLEQFVGD 154

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
            +AW ELAELYI+   Y +A FC EEL+++ P   L+   YA+V YT GGLENL+ ++KY
Sbjct: 155 QEAWHELAELYINEHDYAKAAFCLEELMMTNPHNHLYCQQYAEVKYTQGGLENLELSRKY 214

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDY----- 180
           +A  + L   +N RALFG+ +  S IA   +   K  K+  +  S AA+ + + Y     
Sbjct: 215 FAQALKL-NNRNMRALFGLYMSASHIASNPKASAKTKKDNMKYASWAASQINRAYQFAGR 274

Query: 181 -KQRAPQKLSLLSSVLKSLKVS 197
            K+     L  +  +L++L+++
Sbjct: 275 SKKETKYSLKAVEDMLETLQIT 295

[Close]
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match: EMC2_DANRE (ER membrane protein complex subunit 2 OS=Danio rerio GN=emc2 PE=2 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.0e-30
Identity = 75/202 (37.13%), Postives = 121/202 (59.90%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           M LEA   + +A K Y S+L+++P +   +KR++ + +AQG ++ AI  LN+YLE F+ D
Sbjct: 95  MRLEALERYDDANKLYDSILQDDPTNTAARKRKICILRAQGKSSEAIRELNEYLEQFVGD 154

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
            +AW EL+ELYI+   Y +A FC EEL+++ P   L+   YA+V YT GGLENL+ A+KY
Sbjct: 155 QEAWHELSELYINEHDYAKAAFCLEELMMTNPHNHLYCEQYAEVKYTQGGLENLELARKY 214

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           +A  + L   +N RALFG+ +  S IA   +   K  K+  +  + AA  + + Y+    
Sbjct: 215 FAQALKL-NNRNMRALFGLYMSASHIAASPKVSAKVKKDNVKYAAWAAAQISRAYQMAGR 274

Query: 181 QK------LSLLSSVLKSLKVS 197
            K      +  +  +L+SL+++
Sbjct: 275 GKKENKCSVKAVEEMLESLQIT 295

[Close]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match: A0A0A0LFJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011580 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.3e-95
Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKGLW+EAEKAY SLLEENP DQ+V KRRVALAKAQGN AGAIE LNKYLETFMAD
Sbjct: 106 MLLEAKGLWAEAEKAYASLLEENPCDQIVHKRRVALAKAQGNIAGAIEWLNKYLETFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAELYISL+MYKQAVFCYEELILSQPTVPL HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAELYISLQMYKQAVFCYEELILSQPTVPLFHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGP-ELQSLAATALEKDYKQRA 180
           YASTIDLTGGKNTRALFGICLCTSAIAQL+RGRNKEDKEGP ELQSLAATALEKDYKQRA
Sbjct: 226 YASTIDLTGGKNTRALFGICLCTSAIAQLTRGRNKEDKEGPAELQSLAATALEKDYKQRA 285

Query: 181 PQKLSLLSSVLKSLKVSP 198
           P KLSLLSSVLK LKVSP
Sbjct: 286 PHKLSLLSSVLKGLKVSP 303

[Close]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match: A0A061F258_THECC (Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_026387 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.2e-89
Identity = 169/195 (86.67%), Postives = 183/195 (93.85%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKG W+EAEKAY+SLLE+NP DQV+QKRRVA+AKAQGN +GAIE LNKYLE FMAD
Sbjct: 106 MLLEAKGSWAEAEKAYSSLLEDNPLDQVIQKRRVAMAKAQGNISGAIECLNKYLEIFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAE+Y+SL+MYKQA FCYEELILSQPTVPL+HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YASTIDLTGGKNTRAL GICLCTSAIAQLS+GRNKEDKE PELQSLAATALEKDYKQRA 
Sbjct: 226 YASTIDLTGGKNTRALLGICLCTSAIAQLSKGRNKEDKESPELQSLAATALEKDYKQRAS 285

Query: 181 QKLSLLSSVLKSLKV 196
            KL LL+S L+SLK+
Sbjct: 286 DKLGLLTSALRSLKI 300

[Close]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match: K7WVC7_SOLTU (O-linked GlcNAc transferase OS=Solanum tuberosum GN=PGSC0003DMG400022512 PE=2 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 4.4e-89
Identity = 166/195 (85.13%), Postives = 184/195 (94.36%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEA+GLWSEAE AY+SLLEENPFDQVV KRRVA+AKAQGNT+ AI+ LNKYL+ FMAD
Sbjct: 106 MLLEARGLWSEAENAYSSLLEENPFDQVVHKRRVAMAKAQGNTSAAIDWLNKYLDLFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           H+AWRELAE+Y+SL+MYKQA FCYEELILSQPTVPL+HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HEAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YASTIDLTGGKNTRALFGICLCTSAI QL++GRNKEDKE PELQSL+A ALEKDYKQRAP
Sbjct: 226 YASTIDLTGGKNTRALFGICLCTSAIGQLTKGRNKEDKESPELQSLSAMALEKDYKQRAP 285

Query: 181 QKLSLLSSVLKSLKV 196
            +LS+LSS L+SLK+
Sbjct: 286 SRLSVLSSTLRSLKI 300

[Close]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match: M5VZE2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009192mg PE=4 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 4.8e-88
Identity = 168/196 (85.71%), Postives = 180/196 (91.84%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKG W+EAEKAY+S LEENP DQV+ KRRVA+AKAQGN +GAIE LNKYLE FMAD
Sbjct: 106 MLLEAKGAWAEAEKAYSSFLEENPLDQVIHKRRVAMAKAQGNISGAIEWLNKYLEIFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAE+Y+SL+MYKQA FCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YAS IDLTGGKN RALFGI LCTSAI QL++GRNKEDKE  ELQSLAATALEKDYKQRAP
Sbjct: 226 YASVIDLTGGKNIRALFGINLCTSAIGQLAKGRNKEDKESSELQSLAATALEKDYKQRAP 285

Query: 181 QKLSLLSSVLKSLKVS 197
            KLSLL++ LKSLKVS
Sbjct: 286 DKLSLLTTALKSLKVS 301

[Close]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match: K4B0G1_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 6.3e-88
Identity = 164/195 (84.10%), Postives = 184/195 (94.36%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEA+GLWSEAE AY+SLLEENPFDQVV KRRVA+AKAQGNT+ AI+ LNKYL+ FMAD
Sbjct: 106 MLLEARGLWSEAENAYSSLLEENPFDQVVHKRRVAMAKAQGNTSAAIDWLNKYLDLFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           H+AWRELAE+YISL+MYKQ+ FCYEELILSQPTVPL+HL+YADVLYTLGGLENLQTAKKY
Sbjct: 166 HEAWRELAEIYISLQMYKQSAFCYEELILSQPTVPLYHLSYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YASTIDLTGGK+TRALFGICLCTSAI QL++GRNKEDKE PELQSL+A ALEKDYKQRAP
Sbjct: 226 YASTIDLTGGKSTRALFGICLCTSAIGQLTKGRNKEDKESPELQSLSAMALEKDYKQRAP 285

Query: 181 QKLSLLSSVLKSLKV 196
            +LS+LSS L+SLK+
Sbjct: 286 SRLSVLSSALRSLKI 300

[Close]
BLAST of Cp4.1LG07g09460 vs. TAIR10
Match: AT3G04830.1 (AT3G04830.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 308.5 bits (789), Expect = 2.9e-84
Identity = 151/198 (76.26%), Postives = 181/198 (91.41%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           +LLEAKG+W EAEKAYTSLLE+NP DQV+ KR+VA+AKAQG ++ AIE LNKYLE FMAD
Sbjct: 106 LLLEAKGMWEEAEKAYTSLLEDNPLDQVIHKRKVAMAKAQGKSSLAIEHLNKYLEVFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAE+Y+SL+MYKQA FCYEELIL+QPT+PL+HLAYADVLYT+GGLENL  A+KY
Sbjct: 166 HDAWRELAEIYVSLQMYKQAAFCYEELILTQPTLPLYHLAYADVLYTIGGLENLIAARKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKE--GPELQSLAATALEKDYKQR 180
           YA+TIDLTGGK+TRAL GICLC SAIAQ+S+GRNKEDK+   PELQSLAATALE++YKQ+
Sbjct: 226 YAATIDLTGGKSTRALLGICLCGSAIAQISKGRNKEDKDMAAPELQSLAATALEREYKQK 285

Query: 181 APQKLSLLSSVLKSLKVS 197
           AP KL+LL+S L++LK++
Sbjct: 286 APAKLNLLTSALRNLKIA 303

[Close]
BLAST of Cp4.1LG07g09460 vs. TAIR10
Match: AT5G28220.1 (AT5G28220.1 Protein prenylyltransferase superfamily protein)

HSP 1 Score: 295.8 bits (756), Expect = 1.9e-80
Identity = 147/197 (74.62%), Postives = 172/197 (87.31%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           +LLEAKGLW EAE+AY SLLE+NP DQ + KRRVA++KA G  + AIE LNKYLE FMAD
Sbjct: 119 LLLEAKGLWGEAEEAYASLLEDNPLDQAIHKRRVAISKALGKPSIAIELLNKYLELFMAD 178

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAELY+SL+MYKQA FCYEELILSQPTVPL+HLAYA+VLYT+GG+EN+ +A+KY
Sbjct: 179 HDAWRELAELYLSLQMYKQAAFCYEELILSQPTVPLYHLAYAEVLYTIGGVENIISARKY 238

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKE---GPELQSLAATALEKDYKQ 180
           YA+T+DLTGGKNTRAL GICLC SAIAQLS+GRNKEDK+    PEL SLAA A+EK+YKQ
Sbjct: 239 YAATVDLTGGKNTRALLGICLCASAIAQLSKGRNKEDKDATAAPELHSLAAAAVEKEYKQ 298

Query: 181 RAPQKLSLLSSVLKSLK 195
           +AP KL L+SS L+ LK
Sbjct: 299 KAPDKLQLISSALRILK 315

[Close]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match: gi|449442911|ref|XP_004139224.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis sativus])

HSP 1 Score: 355.1 bits (910), Expect = 7.7e-95
Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKGLW+EAEKAY SLLEENP DQ+V KRRVALAKAQGN AGAIE LNKYLETFMAD
Sbjct: 106 MLLEAKGLWAEAEKAYASLLEENPCDQIVHKRRVALAKAQGNIAGAIEWLNKYLETFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAELYISL+MYKQAVFCYEELILSQPTVPL HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAELYISLQMYKQAVFCYEELILSQPTVPLFHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGP-ELQSLAATALEKDYKQRA 180
           YASTIDLTGGKNTRALFGICLCTSAIAQL+RGRNKEDKEGP ELQSLAATALEKDYKQRA
Sbjct: 226 YASTIDLTGGKNTRALFGICLCTSAIAQLTRGRNKEDKEGPAELQSLAATALEKDYKQRA 285

Query: 181 PQKLSLLSSVLKSLKVSP 198
           P KLSLLSSVLK LKVSP
Sbjct: 286 PHKLSLLSSVLKGLKVSP 303

[Close]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match: gi|659070601|ref|XP_008455808.1| (PREDICTED: ER membrane protein complex subunit 2 [Cucumis melo])

HSP 1 Score: 355.1 bits (910), Expect = 7.7e-95
Identity = 185/198 (93.43%), Postives = 189/198 (95.45%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKGLW+EAEKAY SLLEENP DQ+V KRRVALAKAQGN AGAIE LNKYLETFMAD
Sbjct: 106 MLLEAKGLWAEAEKAYASLLEENPCDQIVHKRRVALAKAQGNIAGAIEWLNKYLETFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAELYISL+MYKQAVFCYEELILSQPTVPL HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAELYISLQMYKQAVFCYEELILSQPTVPLFHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGP-ELQSLAATALEKDYKQRA 180
           YASTIDLTGGKNTRALFGICLCTSAIAQL+RGRNKEDKEGP ELQSLAATALEKDYKQRA
Sbjct: 226 YASTIDLTGGKNTRALFGICLCTSAIAQLTRGRNKEDKEGPAELQSLAATALEKDYKQRA 285

Query: 181 PQKLSLLSSVLKSLKVSP 198
           P KLSLLSSVLK LKVSP
Sbjct: 286 PHKLSLLSSVLKGLKVSP 303

[Close]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match: gi|590642775|ref|XP_007030614.1| (Prenylyltransferase superfamily protein [Theobroma cacao])

HSP 1 Score: 337.4 bits (864), Expect = 1.7e-89
Identity = 169/195 (86.67%), Postives = 183/195 (93.85%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKG W+EAEKAY+SLLE+NP DQV+QKRRVA+AKAQGN +GAIE LNKYLE FMAD
Sbjct: 106 MLLEAKGSWAEAEKAYSSLLEDNPLDQVIQKRRVAMAKAQGNISGAIECLNKYLEIFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAE+Y+SL+MYKQA FCYEELILSQPTVPL+HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YASTIDLTGGKNTRAL GICLCTSAIAQLS+GRNKEDKE PELQSLAATALEKDYKQRA 
Sbjct: 226 YASTIDLTGGKNTRALLGICLCTSAIAQLSKGRNKEDKESPELQSLAATALEKDYKQRAS 285

Query: 181 QKLSLLSSVLKSLKV 196
            KL LL+S L+SLK+
Sbjct: 286 DKLGLLTSALRSLKI 300

[Close]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match: gi|568815686|ref|NP_001275602.1| (uncharacterized protein LOC102596649 [Solanum tuberosum])

HSP 1 Score: 335.5 bits (859), Expect = 6.3e-89
Identity = 166/195 (85.13%), Postives = 184/195 (94.36%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEA+GLWSEAE AY+SLLEENPFDQVV KRRVA+AKAQGNT+ AI+ LNKYL+ FMAD
Sbjct: 106 MLLEARGLWSEAENAYSSLLEENPFDQVVHKRRVAMAKAQGNTSAAIDWLNKYLDLFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           H+AWRELAE+Y+SL+MYKQA FCYEELILSQPTVPL+HLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HEAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLYHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YASTIDLTGGKNTRALFGICLCTSAI QL++GRNKEDKE PELQSL+A ALEKDYKQRAP
Sbjct: 226 YASTIDLTGGKNTRALFGICLCTSAIGQLTKGRNKEDKESPELQSLSAMALEKDYKQRAP 285

Query: 181 QKLSLLSSVLKSLKV 196
            +LS+LSS L+SLK+
Sbjct: 286 SRLSVLSSTLRSLKI 300

[Close]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match: gi|658030381|ref|XP_008350632.1| (PREDICTED: ER membrane protein complex subunit 2-like [Malus domestica])

HSP 1 Score: 333.2 bits (853), Expect = 3.1e-88
Identity = 169/196 (86.22%), Postives = 182/196 (92.86%), Query Frame = 1 

Query: 1   MLLEAKGLWSEAEKAYTSLLEENPFDQVVQKRRVALAKAQGNTAGAIERLNKYLETFMAD 60
           MLLEAKG W+EAEKAY+S LEENP DQV+ KRRVA+AKAQG+T+GAIE LNKYLE FMAD
Sbjct: 106 MLLEAKGSWAEAEKAYSSFLEENPLDQVIHKRRVAMAKAQGDTSGAIEWLNKYLEIFMAD 165

Query: 61  HDAWRELAELYISLKMYKQAVFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 120
           HDAWRELAE+Y+SL+MYKQA FCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY
Sbjct: 166 HDAWRELAEIYVSLQMYKQAAFCYEELILSQPTVPLHHLAYADVLYTLGGLENLQTAKKY 225

Query: 121 YASTIDLTGGKNTRALFGICLCTSAIAQLSRGRNKEDKEGPELQSLAATALEKDYKQRAP 180
           YAS IDLTGGKNTRALFGI LCTSAI QL++GRNKEDKE  ELQSLAATALEKDYKQRAP
Sbjct: 226 YASXIDLTGGKNTRALFGINLCTSAIGQLAKGRNKEDKESLELQSLAATALEKDYKQRAP 285

Query: 181 QKLSLLSSVLKSLKVS 197
            KLSLL++ LKSLKVS
Sbjct: 286 DKLSLLTTALKSLKVS 301

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g09460 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EMC2_BOVIN3.5e-3138.12ER membrane protein complex subunit 2 OS=Bos taurus GN=EMC2 PE=2 SV=1[more]
EMC2_MOUSE4.6e-3138.12ER membrane protein complex subunit 2 OS=Mus musculus GN=Emc2 PE=1 SV=1[more]
EMC2_HUMAN7.8e-3137.62ER membrane protein complex subunit 2 OS=Homo sapiens GN=EMC2 PE=1 SV=1[more]
EMC2_PONAB7.8e-3137.62ER membrane protein complex subunit 2 OS=Pongo abelii GN=EMC2 PE=2 SV=1[more]
EMC2_DANRE3.0e-3037.13ER membrane protein complex subunit 2 OS=Danio rerio GN=emc2 PE=2 SV=1[more]
BLAST of Cp4.1LG07g09460 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LFJ7_CUCSA5.3e-9593.43Uncharacterized protein OS=Cucumis sativus GN=Csa_2G011580 PE=4 SV=1[more]
A0A061F258_THECC1.2e-8986.67Prenylyltransferase superfamily protein OS=Theobroma cacao GN=TCM_026387 PE=4 SV... [more]
K7WVC7_SOLTU4.4e-8985.13O-linked GlcNAc transferase OS=Solanum tuberosum GN=PGSC0003DMG400022512 PE=2 SV... [more]
M5VZE2_PRUPE4.8e-8885.71Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009192mg PE=4 SV=1[more]
K4B0G1_SOLLC6.3e-8884.10Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
BLAST of Cp4.1LG07g09460 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G04830.12.9e-8476.26 Protein prenylyltransferase superfamily protein[more]
AT5G28220.11.9e-8074.62 Protein prenylyltransferase superfamily protein[more]
BLAST of Cp4.1LG07g09460 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442911|ref|XP_004139224.1|7.7e-9593.43PREDICTED: ER membrane protein complex subunit 2 [Cucumis sativus][more]
gi|659070601|ref|XP_008455808.1|7.7e-9593.43PREDICTED: ER membrane protein complex subunit 2 [Cucumis melo][more]
gi|590642775|ref|XP_007030614.1|1.7e-8986.67Prenylyltransferase superfamily protein [Theobroma cacao][more]
gi|568815686|ref|NP_001275602.1|6.3e-8985.13uncharacterized protein LOC102596649 [Solanum tuberosum][more]
gi|658030381|ref|XP_008350632.1|3.1e-8886.22PREDICTED: ER membrane protein complex subunit 2-like [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0016740 transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g09460.1Cp4.1LG07g09460.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 2..128
score: 4.3
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 3..121
score: 3.8
IPR013026Tetratricopeptide repeat-containing domainPROFILEPS50293TPR_REGIONcoord: 1..131
score: 11
NoneNo IPR availablePANTHERPTHR12760TETRATRICOPEPTIDE REPEAT PROTEINcoord: 1..197
score: 3.9
NoneNo IPR availablePANTHERPTHR12760:SF0ER MEMBRANE PROTEIN COMPLEX SUBUNIT 2coord: 1..197
score: 3.9
NoneNo IPR availablePFAMPF14559TPR_19coord: 39..98
score: 3.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g09460Cla019820Watermelon (97103) v1cpewmB806
Cp4.1LG07g09460Carg23440Silver-seed gourdcarcpeB0411
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g09460Cucumber (Chinese Long) v3cpecucB1014
Cp4.1LG07g09460Wax gourdcpewgoB1006
Cp4.1LG07g09460Wax gourdcpewgoB1072
Cp4.1LG07g09460Cucurbita pepo (Zucchini)cpecpeB139
Cp4.1LG07g09460Cucurbita pepo (Zucchini)cpecpeB504
Cp4.1LG07g09460Cucumber (Gy14) v1cgycpeB0356
Cp4.1LG07g09460Cucurbita maxima (Rimu)cmacpeB164
Cp4.1LG07g09460Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g09460Cucurbita maxima (Rimu)cmacpeB789
Cp4.1LG07g09460Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g09460Cucurbita moschata (Rifu)cmocpeB742
Cp4.1LG07g09460Wild cucumber (PI 183967)cpecpiB821
Cp4.1LG07g09460Cucumber (Chinese Long) v2cpecuB820
Cp4.1LG07g09460Bottle gourd (USVL1VR-Ls)cpelsiB659
Cp4.1LG07g09460Watermelon (Charleston Gray)cpewcgB733
Cp4.1LG07g09460Melon (DHL92) v3.5.1cpemeB771
Cp4.1LG07g09460Cucumber (Gy14) v2cgybcpeB271
Cp4.1LG07g09460Melon (DHL92) v3.6.1cpemedB907
Cp4.1LG07g09460Silver-seed gourdcarcpeB1006