Cp4.1LG06g10210.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGAATGTGATAGGGGCAGGCCGAGAAAGGGGTGAGAAGTCCATTTTATAGTGATTCTAATATCAATGGCCCAAATTGAAAGGGGGCCGGGCTGAGCCTGCTGAGCCAAGGAATCGAAGCGAAGCACAACAAGGAATCGAAGGAAACCCTCATAATACGGCCATTTCCACACAGCCAGAGGAATTGCAGGAAAACTAGACAAGGAAGAAGAAGAAGAAGAAGAAGAAGAACAGTGGGAGGATAGCAATCAACCTTATCGCTTCACAGCGTCCGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGAGGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGTAATAATAATTCCTCCTCTCCCTTTTTCTCTGTTCTTATTTCCATCTTATTATGTTTTTCTAATCTTCATCTGGCGGATGGGAAACATTGGAGTTTTAATTCATTTGAAGTAATTTTCTCTGGCCGTTCTTTACTAAAAACTGGAATTGCATGTCATTTCATTGGATCAACCATATGTTAAGATTTTTCCGTCATCGATTTGGACTGTCTGATATCTGCAAATGAAAGAGATGTAACGATTTTATTCTGCGACGAATCTGTAGACTTGAGAAATTGGGGTTCGCGTGAAATGGGTAATCACAAATGTCTTGAACTGTTGTCTTTCTACACTACTCGTGTAACCATTTCTCAGTATTGGGAACATATAGCATGGATGCTAGAGAAATATCGGAGTGTACTTTCAGTTTGTATCATTTATAAGGGTCATTGCATCCTAGAATATCAGGATTTCCTAGATTCGTGTAAAACAAACTCGTGAATTTGAAGCCACTTCATGGACATCCAAGATTTTTGCAAAATAAATGGCCTCTCGAGATGTTGATATACCGATGTTTTATCATTTTTCTGGAACTTCAGTTGTATGATTTTAACAAACTTACTAATGAGCACTGTATCTTGATTAACAACTAGGGAGTCCGGTGACTCGTTGGGCATCTATTGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCGAAATTCGCATCTCCAAAAATCACAGGGCCTCAGCCTTCACAGGTGAAATTTTACATTTTCTTTCATTATAAAATTATCACCTTGAATTTTTCTGTTTAATATGATATTGTTCGATCACCTTTAGATTCTGAACTAA TGAATGTGATAGGGGCAGGCCGAGAAAGGGGTGAGAAGTCCATTTTATAGTGATTCTAATATCAATGGCCCAAATTGAAAGGGGGCCGGGCTGAGCCTGCTGAGCCAAGGAATCGAAGCGAAGCACAACAAGGAATCGAAGGAAACCCTCATAATACGGCCATTTCCACACAGCCAGAGGAATTGCAGGAAAACTAGACAAGGAAGAAGAAGAAGAAGAAGAAGAAGAACAGTGGGAGGATAGCAATCAACCTTATCGCTTCACAGCGTCCGACGGTTCCTTTCTGGATATGGCTGAGAACAAAGAGGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATTGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCGAAATTCGCATCTCCAAAAATCACAGGGCCTCAGCCTTCACAGATTCTGAACTAA ATGGCTGAGAACAAAGAGGTCGTGCCTCCACCGCATGATTTGAATGCGAAGTGGGACGCTTGTCTTGATTTGACGCTGCGCCGATTCGTTTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCGGTGACTCGTTGGGCATCTATTGCTTTTGGTGCTGGATTGGGCATTGGATCAGCGTACACAGATTGTAATTCTTTATTTGAAGGTTCCACCGCGAAATTCGCATCTCCAAAAATCACAGGGCCTCAGCCTTCACAGATTCTGAACTAA MAENKEVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTAKFASPKITGPQPSQILN
BLAST of Cp4.1LG06g10210.1 vs. TrEMBL
Match: A0A0A0KUY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G652290 PE=4 SV=1) HSP 1 Score: 180.6 bits (457), Expect = 8.7e-43 Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TrEMBL
Match: M5XGA8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013917mg PE=4 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 4.8e-33 Identity = 71/95 (74.74%), Postives = 80/95 (84.21%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TrEMBL
Match: V4TE08_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002721mg PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.2e-33 Identity = 66/88 (75.00%), Postives = 78/88 (88.64%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TrEMBL
Match: A0A0D2U126_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G137900 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.2e-33 Identity = 69/93 (74.19%), Postives = 79/93 (84.95%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TrEMBL
Match: A0A067GWJ1_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g041737mg PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 8.2e-33 Identity = 66/88 (75.00%), Postives = 78/88 (88.64%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TAIR10
Match: AT1G72170.1 (AT1G72170.1 Domain of unknown function (DUF543)) HSP 1 Score: 132.5 bits (332), Expect = 1.4e-31 Identity = 63/87 (72.41%), Postives = 73/87 (83.91%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. TAIR10
Match: AT1G22520.2 (AT1G22520.2 Domain of unknown function (DUF543)) HSP 1 Score: 123.2 bits (308), Expect = 8.3e-29 Identity = 60/85 (70.59%), Postives = 69/85 (81.18%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. NCBI nr
Match: gi|700197547|gb|KGN52724.1| (hypothetical protein Csa_5G652290 [Cucumis sativus]) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42 Identity = 86/94 (91.49%), Postives = 89/94 (94.68%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. NCBI nr
Match: gi|659119496|ref|XP_008459688.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X2 [Cucumis melo]) HSP 1 Score: 180.6 bits (457), Expect = 1.2e-42 Identity = 86/93 (92.47%), Postives = 88/93 (94.62%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. NCBI nr
Match: gi|778708139|ref|XP_011656128.1| (PREDICTED: MICOS complex subunit Mic10 isoform X2 [Cucumis sativus]) HSP 1 Score: 179.9 bits (455), Expect = 2.1e-42 Identity = 86/93 (92.47%), Postives = 88/93 (94.62%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. NCBI nr
Match: gi|659119494|ref|XP_008459687.1| (PREDICTED: uncharacterized protein LOC103498730 isoform X1 [Cucumis melo]) HSP 1 Score: 179.5 bits (454), Expect = 2.8e-42 Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 1
BLAST of Cp4.1LG06g10210.1 vs. NCBI nr
Match: gi|449447629|ref|XP_004141570.1| (PREDICTED: MICOS complex subunit Mic10 isoform X1 [Cucumis sativus]) HSP 1 Score: 178.7 bits (452), Expect = 4.7e-42 Identity = 86/92 (93.48%), Postives = 87/92 (94.57%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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