Cp4.1LG05g13610.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g13610.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslation initiation factor IF-3
LocationCp4.1LG05 : 9596779 .. 9602763 (+)
Sequence length2095
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGGCCAATTTCCTGTTGATGGGCTCTGGACTGGGCCGGGAATATTGAGCTGAATTTCAGGTTGGATCCGGAACCGGGTCGAGTTCGCGCTCTCAATTTCTCCCGTTGGCAAGAGCTTCGCTCGTGAGCTCTGCAACTGCGACTGCCGCGAGCCATCGTCTTGTTCCTTCGAAGCAACCCTCGCGGGAGTGTTAAATTCATCGATATTCGTTGAAGTTTGCGACGATGCTATGGTTTGGTCATAGTAACTAGGATACGATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGGTACTGATTCTAGTACTTATGGATGGCAATGGTGCATTAGTTCTTGAATTTGGGATGAATTATATCGAAACTTGTGTAGTAGTGTTTTTCAAAGGTTTCAAGTCCTGTTTTAGATGCTAAATTTTCATGCCTTGAACTTTCAAAAGTTGCGTATTGGGACATGGAATAGAACAGATTTTAGTTATTCTTTTTTTTAAAAAAAAAACTTACAGATATCTTTTTGTATTATACTAAAGATTCTTTTAGTTAGCTTGTTAAGCTTGCATTTGCTCTATTGATTATAAATTAGGCAGCTGATTTGAGTTATAGAGTGTTTAATTCATAAAAAAAAAAATGGTGAGACTGATCTTGTTCATTTTATGATATGTCATTAAAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGTATGTGAGATGAATATTGAATTTTTGTTAATATCATAGTTTGAGATCTCTAAGTTGTGATGCCTTTTCACGTTCTTGGGATTGATATATCACGTTCATAGTGATGCATCTAGGCGGTTAGCGTAGCTCTCTCACCTCTGACAAAATGGGAAAGGTTCATGGAACAATAAGTCCTCATATTTGGGTAAGAAGGGTGTGTGGTGGATGAGGAATTTGATTTTGTTCATGTCTGATATTTCATGTGCAACTACCTACTACATGGATAAAATTTGCTAGAAAACTAGTATTGAATCGATCTATTGGAACGTGTTATAGGGTGCGCTATCTTGATTGTGAAGAAGTAGAAACATGAAAATAATGGAAAAATGAGGAAGAAAATGAATGTTTTTTTTTTTTTTTAATAAAAAAGAAGGAAACATTATAATTTGGACAAAAAGAAGGGTTTCCTCTTTATGGGCCGAAGGAGTTGCACAACATTCTCCATTTGACTTGAATGTCAGAAGTATGATTAAGTACAAAAAATTCTTAGAAGAGATGCCATCGACAAATCCCAAAAAGCGATTTTCTTGCCTTGAAAATCTGAGGGTCTGACAATCTCTTTAAACCAAGTAGCCCAAGCAAGAACTAATGCACCCACCTTCACCATATTCCAAGCAAGAAACAATGCACCCCCAATCAACAGTCTCCAAAACTCTTTGAAAATGAATTTTATCGGGTATAGAAGTTGTGTAATTATGTATTGGGCTATGAATGAGGATTGTGTTTGTTTATTACTTGTTGATGTGTTGCACATGAATTTTTGTAGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGTAAACTTCCATTTTTCATGTTGCCAGCATTTTCTGTCTTTTTATATGTATAATTCTACTTTCAATCTCAGTTATTAGTAGACTTTCATATTTGTTATCGGGTCATGCAATATTTCATTTCACGTGTCATATTTTTTAGGTCCAACAAAAAGCCAACCCACCTGTCTGTAAAATCATGGACTTTCACAGAGAGAAGTACAAGCAGCAAATAAGGGAAAAGGATCGTGTTAAAAGCAAGGTGAGTTCCTGATACGAAATACAAAGTCTTAATCATGCCACAAAAATTGCATGGTGGATGACAAGATTACCATACATGTTAGGATTTAGGGAGGTTTTATTATACTTTTCAATTTTAGAGTATTATTTTTAAGGTTTTAAATTACGATTAGTTAGTGGTCATTATGGTATCGATGGACATGAGAGTTACAACCTCTCAATTGACCATAGGTTACTTTAAGATTTATTTTCAAGGGTATAAATAGTCATTCTTGTTGTTGCTTTAGTATGAGAATTTTGGATATTAAAATGAAAGTTGCATATTATGCTTCTTAAGCCATGAGGTTGTTCCTTTGCATTTCTTATGTTAAGATTTGCATGTTAGAGTCATTCAAGTAGTCTTGATCAAGCTATCTTGTAGAATAATTTGAATCACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCAAAACCTTCCATTGGATTGATTCTTTATCATTTTTGGAGTTCTTTGATAATTTAGATTTAAAGGTCTTGTTGTTCAACAAGGTTATTAGATCAAATCCCAAGAGCTTCATAAAAGTTCCTTAAAAGTTCCGCAAGGCAATGGGTTAGTGTCTTTTAGATAGTGATAATGCCTTTGGTCGGGATATTGTTTTGAAATCAAGAATTTATTGTTTAACTTTTGCTACTTGATCCCATGTCAGTGCTGAGCCGTATTTTATCATAAAATTATGTATTCCTTTTCATTTTGATAATGAATGAAGTGGGTATAATTCAGCCACAAGCTTGGATGATTGTAAACATCTAACATGTTTGTACTTCCTTCATGATTGCATAAATAAAACGAACAATCAAGTTGATTGTCTGAGCTTCATTATGATTGGCCATTTTAATATTATTCCACTTTTAAGTATTAGACAGACAAATCTCTAGAGCTTTGGCTTAATTTACTGAATAACCGTTTAAAAAATTGTGTCAGTTTTAGTTAATCTTTTTCCCAAAAGGAAAACCTGTTAGTATTTCAGGTCTTGAGAAATGACTCTTAAAATTTATACTGGGAAAAGTGTTGCATGTGATGTGAAACAGATTCATATTCTTGTAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGTAAGTAATTTATTTTTTAATGTTCAGACCTTTTGCTGCCATGAATATAACTTGAAGACTCTCTGATGGTGATATGATTGAATGCCTTGCGGACGGAACAGAATTTTCTATTCTAGCCTCATCAGGAAAGTAAAATTGCGTACAAAAGTCCTATGACCATGAATATTATGTTTTAAGCCATGGTTTGTACTCTAGTTCTGTACCATCCTTTTTTAAAAATGATTTCATTATAGTTTAAGATAAATGTTCTTCAAGTAATCTTCAGCAATTTGTTTCTCACTTTGATAGGTGTATATGGAATCAAGTACCCAAAAACGTTAACCTACTTATTTAAGAAACCTCTTATGGTGTTCAACCTAGTTCGTGGATGGAAACATTGAAAAGTCAAATGTGGATATCACCATAACCTATTTGTTTATAAAAGTAAAGTTTCATTTTTTTCATTCAAAATTTGAACCGTAGGCGAAGATTTTTCTGCATTTAATAATTTCCTTCAATTATTGTTACTACCCACAACATTGACATTACTTTTGGTATGTTGTCCATACCCAAAGAATTGTGAAGGATTTGGTTCATATCTCGCTACGACACCATTTTGTTGTAGTACGTACGAGGTTAAGACTACAGTTAAGACAATTTCTTTTCCGCTAAAAGAGTCCTTGAGCTCCAAACCAACCGACTTTTGACCATTATGAGAGCTTAGAACAAGACTCTTAGTATTAGTGTTTGATGCTAGAATTTCTTTATTTATTTATTTGTATTGTCTTCAGGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGGTATTATTTTTCCATCTTACAAAATGACTCATAATTTCTGTTCTTTTTAGTTTCTTATTTCTTTTCAGAGGTCAATGGTTGTTCGTTTGCGTGTTTTTTCAATACAAAATCGCCACAAAAGGCCTACCTTAGCCCACTTTCTTCTTTCCTTGTTTAGAATTGTCTGCCGTTACAATTCCCTTTAACTATAGATCTACCAACCAACCCTTGCCCAAACCCTGACCTAATAAAATTTTCACTTTCCATCCTTAATTTATTTTTGTAGTATTCTCATTAAAATGTGGTATCTTATAGGATAAGCCGATAAGAACACGCCATTTGTGTGTAAAGATCATGACCATTTGCTTGCTCTATTTATATTGTTCTTGTAATCTCTTTCTAGGTCCTGCTTTGTGAAATGTACTATTACTGCATCTGGCTGCTTCATGGTTGTTCAAATTCACGTTGTAAACATCATACTGTTCATTTTTCAATAATATCTTACTTTTATGTTATCTGAACAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGGTATTGCCTCATGAAACACTTCATTCTCTCTTGACGATACCAGTTCATCAATTTCTATTGTCTTATCCTTCCCACCGCATATACTGAACAATCTTTTTGCAGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGAGGTGAAGGTAGAACATGTTTACAGTGATTGTTTCAGTATTATATGGAAGGCTGAGTTTTGATGAGGATATTTATTTAGACATGGAACGTAGCAGAGATTTTTCTTCAAACAGTTACTACTGGCCGTGCTGTTGTGCACGTTGCAAGTTTTATAGTGATTTTGAGTAATAAGAATATTGTCCACATTAACATTTTTAATGGTCAAAGATCAAACGACGTCTCGATATTTTAGGTAGAAATCAACATTGAGAGGAGCAAGCGTTTTCGTTTGACAAAACTCAAAGTTTACGAAGTTGAGACCCTCAAAAGG

mRNA sequence

TGAGGCCAATTTCCTGTTGATGGGCTCTGGACTGGGCCGGGAATATTGAGCTGAATTTCAGGTTGGATCCGGAACCGGGTCGAGTTCGCGCTCTCAATTTCTCCCGTTGGCAAGAGCTTCGCTCGTGAGCTCTGCAACTGCGACTGCCGCGAGCCATCGTCTTGTTCCTTCGAAGCAACCCTCGCGGGAGTGTTAAATTCATCGATATTCGTTGAAGTTTGCGACGATGCTATGGTTTGGTCATAGTAACTAGGATACGATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGAGGTGAAGGTAGAACATGTTTACAGTGATTGTTTCAGTATTATATGGAAGGCTGAGTTTTGATGAGGATATTTATTTAGACATGGAACGTAGCAGAGATTTTTCTTCAAACAGTTACTACTGGCCGTGCTGTTGTGCACGTTGCAAGTTTTATAGTGATTTTGAGTAATAAGAATATTGTCCACATTAACATTTTTAATGGTCAAAGATCAAACGACGTCTCGATATTTTAGGTAGAAATCAACATTGAGAGGAGCAAGCGTTTTCGTTTGACAAAACTCAAAGTTTACGAAGTTGAGACCCTCAAAAGG

Coding sequence (CDS)

ATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGA

Protein sequence

MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPSTNPNAPGASESLKFSLTKSDDNVNKGQKSWGIFSEGPNNSPNRISKPN
Homology
[Close]
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match: IF3_GEOSL (Translation initiation factor IF-3 OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=infC PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.1e-07
Identity = 51/159 (32.08%), Postives = 74/159 (46.54%), Query Frame = 1 

Query: 85  LNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVEA------------------ 144
           +N  I+A  VR+V  D     I+SL+EAL  A   +LDLVE                   
Sbjct: 8   INQAIRAREVRVVGADSEQLGIMSLQEALALAEARQLDLVEVSPTAVPPVCRIMDYGKFK 67

Query: 145 -------EVGLRKGDH---KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RGGE 204
                  +   +K  H   KEV+   KT+E DL  K   V+R +E G + K +   RG E
Sbjct: 68  YQQSKKLQEARKKQSHVQVKEVKLRPKTDEHDLMTKIKHVRRFIEEGNKAKVTLVFRGRE 127

Query: 205 DQDL---GGLLSRLSALIEDVAMVESGPRVERGQAYVIV 209
              L      L R++A +ED+A+VE  P++E    ++IV
Sbjct: 128 ITHLEFGSRALDRVAAELEDIAVVEFKPKMEGRSMFMIV 166

[Close]
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match: IF3_ACIAD (Translation initiation factor IF-3 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=infC PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-06
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+++ VRLV  DG    IVSL EAL  A E++LDLVE                 
Sbjct: 17  PAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + +  +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match: IF3_ACIBS (Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain SDF) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+A+ VRLV  DG    IVSL EAL  A +  LDLVE                 
Sbjct: 17  PAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + ++ +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match: IF3_ACIBY (Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain AYE) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+A+ VRLV  DG    IVSL EAL  A +  LDLVE                 
Sbjct: 17  PAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + ++ +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match: IF3_PSEAE (Translation initiation factor IF-3 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +N+ I A  VRL+  DG    +VS+ EA+  A E KLDLVE                 
Sbjct: 17  PPINENISAREVRLIGADGQQVGVVSIDEAIRLAEEAKLDLVEISADAVPPVCRIMDYGK 76

Query: 143 -----------AEVGLRKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                      A+   ++   KE++F   TEE D ++K   + R +  G + K S   RG
Sbjct: 77  HLFEKKKQAAVAKKNQKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q+LG  LL R+ A + +   VE  P++E  Q  +++      P KK
Sbjct: 137 REMAHQELGMELLKRVEADLVEYGTVEQHPKLEGRQLMMVI-----APKKK 182

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match: A0A0A0LJ90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270880 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 5.2e-142
Identity = 315/576 (54.69%), Postives = 369/576 (64.06%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CRI+QSKL  F +QFKRHYF I +++++DS RTT +V  Y+ RI PR PADF  K 
Sbjct: 1   MAFFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTHNVYGYVERI-PRRPADFADKF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------ 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA      
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLD 120

Query: 121 ---------------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDL 180
                                      RE      + E+ ++K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++I
Sbjct: 181 RMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDV--------------------- 360
           +V DG +D DE FDLKDD N I   T   KMNV SDRDV                     
Sbjct: 301 TV-DGTSDSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTD 360

Query: 361 -------NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------ 420
                   ++   PP+         S P  R+  +      A +RY +            
Sbjct: 361 NRPKKIEPMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQI 420

Query: 421 IEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSA 480
            EP NRFQPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S 
Sbjct: 421 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSV 480

Query: 481 SRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS--- 496
           SRN  + SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    
Sbjct: 481 SRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTR 540

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match: F6I0Y8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g02640 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86
Identity = 237/529 (44.80%), Postives = 303/529 (57.28%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTH--FSNQFKRHYFHICYASSIDSG-RTTKHVSEYIARIIPRGPADFG 60
           M+F  RINQ KL     + QFKR    I +A S+++  R T    E    +  R P+DF 
Sbjct: 1   MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQTIRGFENPCWVNRRNPSDFC 60

Query: 61  GKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAREL 120
             VRF+AAPVQ   K K+EE + SGPR+ND+I+A+FVRLV+DDGH IVS   AL RAR+L
Sbjct: 61  YNVRFFAAPVQ--AKPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKL 120

Query: 121 K-----------------LDL----------------VEAEVGLRKGDHKEVRFTGKTEE 180
           K                 +D                  ++E+ LRKGD KEVRF+GKTE 
Sbjct: 121 KLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQA 240
           KDL+MKADMVKRLM+RGYRVKC A G EDQDLGGLL+RLS+LIEDV  VESGPRVE+ QA
Sbjct: 181 KDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQA 240

Query: 241 YVIVRHVKFGPSKKGGGGKASKVA-----------------VNARQEVKNGTTPPVPA-- 300
           YVIVRH+KFGPSKKG G KASKV                  +N    V++     V +  
Sbjct: 241 YVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDT 300

Query: 301 ARSSTPDEEEMGPEESDS----------------EATWSVVDGNNDFDEVFDLKDDAN-- 360
           A S   +E+E+  +E+D+                +ATWSV D N+DFD+VFD  +DAN  
Sbjct: 301 AESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDANPS 360

Query: 361 -GIPLETTANKMNVASDRDVNVSDLSP-PSRLPGTSRTSSVPLSRQDSSTKADNRYKKIE 420
                +T A     +S  ++N+SD+   P  +  ++RT+SVP S  +   +  NRY+K E
Sbjct: 361 NSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYRKSE 420

Query: 421 PANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASR 455
           P NRF P   MDNKG GA +SLR  PQ  NQ +Q  ++TN S PS   TR D   +S  R
Sbjct: 421 PRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTN-SSPSTGRTRQDGTDASVFR 480

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match: A0A067FLH8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009379mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 231/552 (41.85%), Postives = 294/552 (53.26%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CR NQS+L H ++QFKR+Y  +   +   S        +       + P DF   V
Sbjct: 1   MAFSCRTNQSRLKHLTHQFKRYYIQVPSLNHSISHTKICEAKKPFWESAVKTPNDFCNNV 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLD 120
           RF+AAPVQ Q   KK+E  TSGPRLNDKI A+FVRLV D+GH +VS  EAL  AR L+ D
Sbjct: 61  RFFAAPVQAQ--QKKDEKETSGPRLNDKINAQFVRLVLDEGHKVVSRHEALALARSLQCD 120

Query: 121 LVEA---------------------------------EVGLRKGDHKEVRFTGKTEEKDL 180
           LVE                                  ++ L+KGD KEVRF+GK E+KDL
Sbjct: 121 LVEVDRKANPPVCKIMDFHKEKYQKELKEKDRAKAKSDITLKKGDCKEVRFSGKIEQKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSA----RGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQ 240
           +MKAD VKRLM++GYRVKC A    +  E +DLGG LSRL  LIED+++VESGP VER Q
Sbjct: 181 QMKADTVKRLMDKGYRVKCMALPVGKKEETEDLGGYLSRLIDLIEDISVVESGPHVERKQ 240

Query: 241 AYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARS---STP-----DEEE 300
           AY I+RHVKFGPSKKGG  K    AV     V    TP     RS    TP     D  E
Sbjct: 241 AYAIIRHVKFGPSKKGGLKKLK--AVGDTSGVSKAATPSSTIERSVDIPTPAIHEEDPAE 300

Query: 301 MGPEESDSEAT-WSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASD-----RDVNVS 360
            G E+ + + T WSV + N+D +EVFDL D A G+    T   MN A +       ++ S
Sbjct: 301 FGLEKIEKKNTPWSVSNSNDDLNEVFDLADGAKGLTSNFTPKVMNAAPESASPPASISAS 360

Query: 361 DLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRS 420
           + S P   P  SR  ++  +    S    NRY + E  N+F P   +DN G G R+S RS
Sbjct: 361 NFSHPKPAPNFSRADTLGSTPHGPSLGTGNRYARSEQKNQF-PQKPIDNLGSGTRESFRS 420

Query: 421 EPQIRNQWRQPLTNTNL-SPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPS 480
           EPQ  +Q RQP    N+ + PSM E +P    +S  RN+  P++ +S        VP+  
Sbjct: 421 EPQFPSQRRQPPPPPNMNASPSMGEKKPIGTEASNFRNSRLPNSISS-------DVPNTR 480

Query: 481 KTSFGIFSALNANAPVKQDAASTSYR------GNRGPSTNPNAPGASESLKFSLTKSDDN 495
            +S+GIFS   ANAP  Q  A+   +      G  G   N N+PG       S T   DN
Sbjct: 481 ASSYGIFSNPTANAPTGQGMAADRTKEGIPTQGTAGVRPNQNSPGLKSD--GSQTPGPDN 535

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match: V4RN77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028168mg PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80
Identity = 230/552 (41.67%), Postives = 293/552 (53.08%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CR NQS+L H ++QFKR+Y  +   +   S        +       + P DF   V
Sbjct: 1   MAFSCRTNQSRLKHLTHQFKRYYIQVPSLNHSISHTKICEAKKPFWESAVKTPNDFCNNV 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLD 120
           RF+AAPVQ Q   KK+E  TSGPRLNDKI A+FVRLV D+GH +VS  EAL  AR L+ D
Sbjct: 61  RFFAAPVQAQ--QKKDEKETSGPRLNDKINAQFVRLVLDEGHKVVSRHEALALARSLQCD 120

Query: 121 LVEA---------------------------------EVGLRKGDHKEVRFTGKTEEKDL 180
           LVE                                  ++ L+KGD KEVRF+GK E+KDL
Sbjct: 121 LVEVDRKANPPVCKIMDFHKEKYHKELKEKDRAKAKSDITLKKGDCKEVRFSGKIEQKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSA----RGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQ 240
           +MKAD VKRLM++GYRVKC A    +  E +DLGG LSRL  LIED+++VESGP VER Q
Sbjct: 181 QMKADTVKRLMDKGYRVKCMALPVGKKEETEDLGGYLSRLIDLIEDISVVESGPHVERKQ 240

Query: 241 AYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARS---STP-----DEEE 300
           AY I+RHVKFGPSKKGG  K    AV     V    TP     RS    TP     D  E
Sbjct: 241 AYAIIRHVKFGPSKKGGLKKLK--AVGDTSGVSKAATPSSTIERSVDIPTPAIHEEDPAE 300

Query: 301 MGPEESDSEAT-WSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASD-----RDVNVS 360
            G E+ + + T WSV + N+D +EVFDL D A G+    T   MN A +       ++ S
Sbjct: 301 FGLEKIEKKNTPWSVSNSNDDLNEVFDLADGAKGLTSNFTPKVMNAAPESASPPASISAS 360

Query: 361 DLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRS 420
           + S P   P  SR  ++  +    S    NRY + E  N+F P   +DN G G R+S RS
Sbjct: 361 NFSHPKPAPNFSRADTLGSTPHGPSLGTGNRYARSEQKNQF-PQKPIDNLGSGMRESFRS 420

Query: 421 EPQIRNQWRQPLTNTNL-SPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPS 480
           EPQ  +Q RQP    N+ + PSM E +P    +S  RN+  P++  S        VP+  
Sbjct: 421 EPQFPSQRRQPPPPPNMNASPSMGEKKPIGTEASNFRNSRLPNSMPS-------DVPNTR 480

Query: 481 KTSFGIFSALNANAPVKQDAASTSYR------GNRGPSTNPNAPGASESLKFSLTKSDDN 495
            +S+GIFS   ANAP  Q  A+   +      G  G   N ++PG       S T   DN
Sbjct: 481 ASSYGIFSNPTANAPTGQGMAADRTKEGIPTQGTAGVRPNQSSPGLKSD--GSQTPGPDN 535

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match: A0A061E5R4_THECC (Translation initiation factor 3 family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006587 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.4e-76
Identity = 237/582 (40.72%), Postives = 310/582 (53.26%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTT---KHVSEYIARIIPRGPADFG 60
           MAF CRINQS+L   SNQ++R YF   YASSID  RT+   K VS    R     P+ F 
Sbjct: 1   MAFWCRINQSRLQLISNQYRRFYFQTPYASSIDPIRTSVLGKPVSSIDGR-----PSYFY 60

Query: 61  GKVRFYAAPVQFQGKAK-KEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARE 120
           G VRF+AAPVQ  GK   KEE +    RLN++IKA+ +RLV+++GH I+ + EAL RA+ 
Sbjct: 61  GNVRFFAAPVQ--GKYNNKEEPSKFEKRLNEQIKADVIRLVTEEGHEIIPIHEALRRAKV 120

Query: 121 LKLDLVEAEVG---------------------------------LRKGDHKEVRFTGKTE 180
           L LDLVE +                                   L+KG+ KE+RFTGK E
Sbjct: 121 LDLDLVEVQKSANPPVCKLMDYNQERYKRRVMEKDRAKSKSGKALKKGECKEIRFTGKIE 180

Query: 181 EKDLRMKADMVKRLMERGYRVKCSARG----GEDQDLGGLLSRLSALIEDVAMVESGPRV 240
            KD++MKAD V RLMERGYRVKC A G     ED+DLGGLLSRL+ LI+DV++VESGPRV
Sbjct: 181 AKDIKMKADSVIRLMERGYRVKCMAMGKGKEDEDEDLGGLLSRLTDLIQDVSVVESGPRV 240

Query: 241 ERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVP----------AARSS 300
           ER QAYV+VRHVKFGP KK GGGK SKV  + + E K    P VP          +    
Sbjct: 241 ERKQAYVVVRHVKFGPLKK-GGGKTSKVVEDTKAEPK----PMVPEDDSIESISESENEI 300

Query: 301 TPDEEEM---------GPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNV 360
             DE+++         G    D +  WSV +  +DFD++F+L    NG     + +K   
Sbjct: 301 LSDEDDLPRSSPMQMQGKNFEDKKTAWSVSESGDDFDKLFNL----NGGFSSNSTSKGIH 360

Query: 361 ASDRDVNVSDLSPPSR-LPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNK 420
           A+   VN S     S+ L      +S   S  D+S   +NRY+K EP N+F P   M + 
Sbjct: 361 AAQHTVNSSRNDFASKFLHPKPVANSTEYSHPDTSLGTENRYRKSEPRNQFPPARSMGHM 420

Query: 421 GRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYPSNETSKSGS 480
           G+  R+S RSEP+   Q +Q   N N S  S+ ET+   N +S  RN    +N+  K   
Sbjct: 421 GQNTRESGRSEPRFSYQRQQAPQNMNAS-SSLGETKQVGNDASLVRNLRPQTNDLPKQRP 480

Query: 481 SQHTVPDPSKTSFGIFSALNANAPVKQDAAST---SYRGNR----------GPSTNPNAP 509
           S   VP     SFGIFS   AN+  KQ   +    S  GNR          G    PN P
Sbjct: 481 SHSDVPGTPAPSFGIFSTPTANSSGKQGIGAEVHGSKEGNRYASLRNCGLGGNGATPNFP 540

[Close]
BLAST of Cp4.1LG05g13610.1 vs. TAIR10
Match: AT1G34360.1 (AT1G34360.1 translation initiation factor 3 (IF-3) family protein)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-30
Identity = 160/532 (30.08%), Postives = 231/532 (43.42%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYF-HICYASSIDSGRTTKHVSEYIARIIPRG-----PA 60
           MA    IN+S L + SNQ  R+Y+  +C ASS    + T  +S +    IP       P+
Sbjct: 1   MAIWRIINRSYLKYASNQLTRNYYTQVCLASSTHVVKQTTKLSSFD---IPNSDICTRPS 60

Query: 61  DFGGKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA 120
           +    +RF A   Q   + K+ E ++ GPRLN+KI  ++VRLVS++GH +VSLREAL RA
Sbjct: 61  NIFQNLRFLATSAQT--RKKEAEVDSDGPRLNEKITGDYVRLVSEEGHCVVSLREALRRA 120

Query: 121 RELKLDLVE----------------------AEVGLRKG----------DHKEVRFTGKT 180
           +EL+ DLVE                      A+VG  +           D KE+RFT K 
Sbjct: 121 KELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRFTPKI 180

Query: 181 EEKDLRMKADMVKRLMERGYRVKCSARGGED-------QDLGGLLSRLSALIEDVAMVES 240
           E KDL+ K+D   +LME GYRVKC A   +D       + L  LL R +  I D A+VES
Sbjct: 181 EAKDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVES 240

Query: 241 GPRVERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEE 300
            P  +R  A VIVRH KFGP KKGG      + + + +  +    P    A  +T D++E
Sbjct: 241 WPEADRKGAVVIVRHAKFGPPKKGGVKLMKDIDIKSARVKEESPKPDSSKAGVATVDDQE 300

Query: 301 MGPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPS 360
              +   SE  +SV              + A  +  +    K   +S+     S     S
Sbjct: 301 ---DIEKSEPRFSV--------------EQAQPVKFQNAYAKREPSSE----FSGGRDAS 360

Query: 361 RLPGTSRTSSVPLSRQDSSTKADNRYK--KIEPANRFQPPNVMDNKGRGARDSLRSEPQI 420
           R    S    V   R   S +A N+    + +P +  QPP+    +    + + R +PQ 
Sbjct: 361 RFEPQSPNQHVNPQRPRFSNQAPNQQPTGRFDPQSPNQPPSAPRPQFPNQQPTGRFDPQF 420

Query: 421 RNQWRQP-LTNTNLSPPSMRETRPD-DNVSSASRNTTYPSNETSK--SGSSQHTVPD--- 470
            +Q  +P   N   +  S     P   N   +   + +P    ++  SG S +  PD   
Sbjct: 421 PSQPPRPQFPNQAPNQQSTGRFNPQFPNQRPSPPQSRFPDQAPNQQPSGPSPNRHPDRQG 480

[Close]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match: gi|449458680|ref|XP_004147075.1| (PREDICTED: uncharacterized protein LOC101207030 isoform X1 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 7.4e-142
Identity = 315/576 (54.69%), Postives = 369/576 (64.06%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CRI+QSKL  F +QFKRHYF I +++++DS RTT +V  Y+ RI PR PADF  K 
Sbjct: 1   MAFFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTHNVYGYVERI-PRRPADFADKF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------ 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA      
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLD 120

Query: 121 ---------------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDL 180
                                      RE      + E+ ++K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++I
Sbjct: 181 RMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDV--------------------- 360
           +V DG +D DE FDLKDD N I   T   KMNV SDRDV                     
Sbjct: 301 TV-DGTSDSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTD 360

Query: 361 -------NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------ 420
                   ++   PP+         S P  R+  +      A +RY +            
Sbjct: 361 NRPKKIEPMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQI 420

Query: 421 IEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSA 480
            EP NRFQPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S 
Sbjct: 421 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSV 480

Query: 481 SRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS--- 496
           SRN  + SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    
Sbjct: 481 SRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTR 540

[Close]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match: gi|659115751|ref|XP_008457718.1| (PREDICTED: uncharacterized protein LOC103497345 isoform X1 [Cucumis melo])

HSP 1 Score: 497.3 bits (1279), Expect = 3.2e-137
Identity = 311/582 (53.44%), Postives = 370/582 (63.57%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MA  CRI+QSKL  F +QFKRHYF I +++++DS RTT HV  Y+ RI PR PADF    
Sbjct: 1   MALFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTNHVYRYVERI-PRRPADFADNF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAR----- 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+ LREAL RAR     
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILPLREALERARELKLD 120

Query: 121 -----------ELKL---------------DLVEAEVGL--RKGDHKEVRFTGKTEEKDL 180
                        KL               D V+++V L  +K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVELVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           +MKADMVKRLMERGYRVKC+ARG E+QDLG LLSRLSA+IEDVA+VESGP VE+GQA++I
Sbjct: 181 KMKADMVKRLMERGYRVKCTARGDENQDLGALLSRLSAMIEDVALVESGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKVA NA Q+V+NG+TPP+ A     P+++     ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVAANAEQKVQNGSTPPISAV---DPEDDA----ESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVP 360
            V DG +D DE FDLKDD + I   T   KMNV SDRDV   D    S +P     SS+ 
Sbjct: 301 RV-DGTSDCDEAFDLKDDRDVITSTTATKKMNVVSDRDV--PDSGRTSSVPLFREDSSIK 360

Query: 361 LSRQDSSTKADNRYKKI---------------------EPANRFQPPNVMDNKGRGARDS 420
           +  +    +  NR++                       EP NRFQPPNV D   +GARDS
Sbjct: 361 IDNRPKKIEPMNRFQPPNVTDRYSQGARDSLRSGPQIREPMNRFQPPNVTDRYSQGARDS 420

Query: 421 LRSEPQIR---NQWRQP---------LTNTNLSPPSMRETR----PD------------- 480
           LRSEPQIR   N+++ P           ++  S P +R+ R    P+             
Sbjct: 421 LRSEPQIREPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSPTMRETRQY 480

Query: 481 DNVSSASRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNR 496
           DN +S SRN  + SN TSK G S HT   PSKTSFGIFS+ N+NAP KQD  +T Y+GNR
Sbjct: 481 DNNTSVSRNINHSSNATSKPGPSHHTDSSPSKTSFGIFSSPNSNAPGKQDPPATGYQGNR 540

[Close]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match: gi|778669790|ref|XP_011649302.1| (PREDICTED: uncharacterized protein LOC101207030 isoform X2 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 4.8e-117
Identity = 272/509 (53.44%), Postives = 318/509 (62.48%), Query Frame = 1 

Query: 68  QFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------------- 127
           +FQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA             
Sbjct: 4   KFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLDLVEVQQK 63

Query: 128 --------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDLRMKADMV 187
                               RE      + E+ ++K  HKEVRFTGKTEEKDLRMKADMV
Sbjct: 64  ANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDLRMKADMV 123

Query: 188 KRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFG 247
           KRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++IVRHVKFG
Sbjct: 124 KRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFIIVRHVKFG 183

Query: 248 PSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNN 307
           PSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW+V DG +
Sbjct: 184 PSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTWTV-DGTS 243

Query: 308 DFDEVFDLKDDANGIPLETTANKMNVASDRDV---------------------------- 367
           D DE FDLKDD N I   T   KMNV SDRDV                            
Sbjct: 244 DSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTDNRPKKIE 303

Query: 368 NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------IEPANRF 427
            ++   PP+         S P  R+  +      A +RY +             EP NRF
Sbjct: 304 PMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQIREPMNRF 363

Query: 428 QPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYP 487
           QPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S SRN  + 
Sbjct: 364 QPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSVSRNINHS 423

Query: 488 SNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS----TNPNAP 496
           SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP     TNPNAP
Sbjct: 424 SNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTRLTNPNAP 483

[Close]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match: gi|659115753|ref|XP_008457719.1| (PREDICTED: uncharacterized protein LOC103497345 isoform X2 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 269/515 (52.23%), Postives = 321/515 (62.33%), Query Frame = 1 

Query: 68  QFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAR------------ 127
           +FQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+ LREAL RAR            
Sbjct: 4   KFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILPLREALERARELKLDLVEVQQK 63

Query: 128 ----ELKL---------------DLVEAEVGL--RKGDHKEVRFTGKTEEKDLRMKADMV 187
                 KL               D V+++V L  +K  HKEVRFTGKTEEKDL+MKADMV
Sbjct: 64  ANPPVCKLMDFHREKYKKQIREKDRVKSKVELVMKKAGHKEVRFTGKTEEKDLKMKADMV 123

Query: 188 KRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFG 247
           KRLMERGYRVKC+ARG E+QDLG LLSRLSA+IEDVA+VESGP VE+GQA++IVRHVKFG
Sbjct: 124 KRLMERGYRVKCTARGDENQDLGALLSRLSAMIEDVALVESGPSVEKGQAFIIVRHVKFG 183

Query: 248 PSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNN 307
           PSKKGGG KASKVA NA Q+V+NG+TPP+ A     P+++     ES  E TW V DG +
Sbjct: 184 PSKKGGGSKASKVAANAEQKVQNGSTPPISAV---DPEDDA----ESSEETTWRV-DGTS 243

Query: 308 DFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVPLSRQDSS 367
           D DE FDLKDD + I   T   KMNV SDRDV   D    S +P     SS+ +  +   
Sbjct: 244 DCDEAFDLKDDRDVITSTTATKKMNVVSDRDV--PDSGRTSSVPLFREDSSIKIDNRPKK 303

Query: 368 TKADNRYKKI---------------------EPANRFQPPNVMDNKGRGARDSLRSEPQI 427
            +  NR++                       EP NRFQPPNV D   +GARDSLRSEPQI
Sbjct: 304 IEPMNRFQPPNVTDRYSQGARDSLRSGPQIREPMNRFQPPNVTDRYSQGARDSLRSEPQI 363

Query: 428 R---NQWRQP---------LTNTNLSPPSMRETR----PD-------------DNVSSAS 487
           R   N+++ P           ++  S P +R+ R    P+             DN +S S
Sbjct: 364 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSPTMRETRQYDNNTSVS 423

Query: 488 RNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGP----S 496
           RN  + SN TSK G S HT   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    S
Sbjct: 424 RNINHSSNATSKPGPSHHTDSSPSKTSFGIFSSPNSNAPGKQDPPATGYQGNRGPPYTRS 483

[Close]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match: gi|297744586|emb|CBI37848.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 237/529 (44.80%), Postives = 303/529 (57.28%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTH--FSNQFKRHYFHICYASSIDSG-RTTKHVSEYIARIIPRGPADFG 60
           M+F  RINQ KL     + QFKR    I +A S+++  R T    E    +  R P+DF 
Sbjct: 1   MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQTIRGFENPCWVNRRNPSDFC 60

Query: 61  GKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAREL 120
             VRF+AAPVQ   K K+EE + SGPR+ND+I+A+FVRLV+DDGH IVS   AL RAR+L
Sbjct: 61  YNVRFFAAPVQ--AKPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKL 120

Query: 121 K-----------------LDL----------------VEAEVGLRKGDHKEVRFTGKTEE 180
           K                 +D                  ++E+ LRKGD KEVRF+GKTE 
Sbjct: 121 KLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQA 240
           KDL+MKADMVKRLM+RGYRVKC A G EDQDLGGLL+RLS+LIEDV  VESGPRVE+ QA
Sbjct: 181 KDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQA 240

Query: 241 YVIVRHVKFGPSKKGGGGKASKVA-----------------VNARQEVKNGTTPPVPA-- 300
           YVIVRH+KFGPSKKG G KASKV                  +N    V++     V +  
Sbjct: 241 YVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDT 300

Query: 301 ARSSTPDEEEMGPEESDS----------------EATWSVVDGNNDFDEVFDLKDDAN-- 360
           A S   +E+E+  +E+D+                +ATWSV D N+DFD+VFD  +DAN  
Sbjct: 301 AESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDANPS 360

Query: 361 -GIPLETTANKMNVASDRDVNVSDLSP-PSRLPGTSRTSSVPLSRQDSSTKADNRYKKIE 420
                +T A     +S  ++N+SD+   P  +  ++RT+SVP S  +   +  NRY+K E
Sbjct: 361 NSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYRKSE 420

Query: 421 PANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASR 455
           P NRF P   MDNKG GA +SLR  PQ  NQ +Q  ++TN S PS   TR D   +S  R
Sbjct: 421 PRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTN-SSPSTGRTRQDGTDASVFR 480

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g13610.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IF3_GEOSL9.1e-0732.08Translation initiation factor IF-3 OS=Geobacter sulfurreducens (strain ATCC 5157... [more]
IF3_ACIAD1.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baylyi (strain ATCC 33305 / ... [more]
IF3_ACIBS2.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain SDF) GN=in... [more]
IF3_ACIBY2.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain AYE) GN=in... [more]
IF3_PSEAE2.6e-0630.41Translation initiation factor IF-3 OS=Pseudomonas aeruginosa (strain ATCC 15692 ... [more]
BLAST of Cp4.1LG05g13610.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ90_CUCSA5.2e-14254.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270880 PE=4 SV=1[more]
F6I0Y8_VITVI2.4e-8644.80Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g02640 PE=4 SV=... [more]
A0A067FLH8_CITSI3.0e-8141.85Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009379mg PE=4 SV=1[more]
V4RN77_9ROSI1.9e-8041.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028168mg PE=4 SV=1[more]
A0A061E5R4_THECC6.4e-7640.72Translation initiation factor 3 family protein, putative isoform 1 OS=Theobroma ... [more]
BLAST of Cp4.1LG05g13610.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G34360.11.3e-3030.08 translation initiation factor 3 (IF-3) family protein[more]
BLAST of Cp4.1LG05g13610.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458680|ref|XP_004147075.1|7.4e-14254.69PREDICTED: uncharacterized protein LOC101207030 isoform X1 [Cucumis sativus][more]
gi|659115751|ref|XP_008457718.1|3.2e-13753.44PREDICTED: uncharacterized protein LOC103497345 isoform X1 [Cucumis melo][more]
gi|778669790|ref|XP_011649302.1|4.8e-11753.44PREDICTED: uncharacterized protein LOC101207030 isoform X2 [Cucumis sativus][more]
gi|659115753|ref|XP_008457719.1|1.2e-11252.23PREDICTED: uncharacterized protein LOC103497345 isoform X2 [Cucumis melo][more]
gi|297744586|emb|CBI37848.3|3.4e-8644.80unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR019815Translation_initiation_fac_3_C
IPR019814Translation_initiation_fac_3_N
IPR001288Translation_initiation_fac_3
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0005840 ribosome
molecular_function GO:0003743 translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG05g13610Cp4.1LG05g13610gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG05g13610.1Cp4.1LG05g13610.1-proteinpolypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG05g13610.1:five_prime_utr:001Cp4.1LG05g13610.1:five_prime_utr:001five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG05g13610.1:cds:001Cp4.1LG05g13610.1:cds:001CDS
Cp4.1LG05g13610.1:cds:002Cp4.1LG05g13610.1:cds:002CDS
Cp4.1LG05g13610.1:cds:003Cp4.1LG05g13610.1:cds:003CDS
Cp4.1LG05g13610.1:cds:004Cp4.1LG05g13610.1:cds:004CDS
Cp4.1LG05g13610.1:cds:005Cp4.1LG05g13610.1:cds:005CDS
Cp4.1LG05g13610.1:cds:006Cp4.1LG05g13610.1:cds:006CDS
Cp4.1LG05g13610.1:cds:007Cp4.1LG05g13610.1:cds:007CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG05g13610.1:three_prime_utr:001Cp4.1LG05g13610.1:three_prime_utr:001three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 1..287
score: 1.5
IPR019814Translation initiation factor 3, N-terminalGENE3DG3DSA:3.10.20.80coord: 81..124
score: 3.
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 85..124
score: 2.
IPR019814Translation initiation factor 3, N-terminalunknownSSF54364Translation initiation factor IF3, N-terminal domaincoord: 82..126
score: 1.
IPR019815Translation initiation factor 3, C-terminalGENE3DG3DSA:3.30.110.10coord: 132..212
score: 3.2
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 133..208
score: 5.
IPR019815Translation initiation factor 3, C-terminalunknownSSF55200Translation initiation factor IF3, C-terminal domaincoord: 133..212
score: 3.92
NoneNo IPR availablePANTHERPTHR10938:SF2SUBFAMILY NOT NAMEDcoord: 1..287
score: 1.5