Cp4.1LG05g13610 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g13610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranslation initiation factor IF-3
LocationCp4.1LG05 : 9596779 .. 9602763 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGGCCAATTTCCTGTTGATGGGCTCTGGACTGGGCCGGGAATATTGAGCTGAATTTCAGGTTGGATCCGGAACCGGGTCGAGTTCGCGCTCTCAATTTCTCCCGTTGGCAAGAGCTTCGCTCGTGAGCTCTGCAACTGCGACTGCCGCGAGCCATCGTCTTGTTCCTTCGAAGCAACCCTCGCGGGAGTGTTAAATTCATCGATATTCGTTGAAGTTTGCGACGATGCTATGGTTTGGTCATAGTAACTAGGATACGATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGGTACTGATTCTAGTACTTATGGATGGCAATGGTGCATTAGTTCTTGAATTTGGGATGAATTATATCGAAACTTGTGTAGTAGTGTTTTTCAAAGGTTTCAAGTCCTGTTTTAGATGCTAAATTTTCATGCCTTGAACTTTCAAAAGTTGCGTATTGGGACATGGAATAGAACAGATTTTAGTTATTCTTTTTTTTAAAAAAAAAACTTACAGATATCTTTTTGTATTATACTAAAGATTCTTTTAGTTAGCTTGTTAAGCTTGCATTTGCTCTATTGATTATAAATTAGGCAGCTGATTTGAGTTATAGAGTGTTTAATTCATAAAAAAAAAAATGGTGAGACTGATCTTGTTCATTTTATGATATGTCATTAAAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGTATGTGAGATGAATATTGAATTTTTGTTAATATCATAGTTTGAGATCTCTAAGTTGTGATGCCTTTTCACGTTCTTGGGATTGATATATCACGTTCATAGTGATGCATCTAGGCGGTTAGCGTAGCTCTCTCACCTCTGACAAAATGGGAAAGGTTCATGGAACAATAAGTCCTCATATTTGGGTAAGAAGGGTGTGTGGTGGATGAGGAATTTGATTTTGTTCATGTCTGATATTTCATGTGCAACTACCTACTACATGGATAAAATTTGCTAGAAAACTAGTATTGAATCGATCTATTGGAACGTGTTATAGGGTGCGCTATCTTGATTGTGAAGAAGTAGAAACATGAAAATAATGGAAAAATGAGGAAGAAAATGAATGTTTTTTTTTTTTTTTAATAAAAAAGAAGGAAACATTATAATTTGGACAAAAAGAAGGGTTTCCTCTTTATGGGCCGAAGGAGTTGCACAACATTCTCCATTTGACTTGAATGTCAGAAGTATGATTAAGTACAAAAAATTCTTAGAAGAGATGCCATCGACAAATCCCAAAAAGCGATTTTCTTGCCTTGAAAATCTGAGGGTCTGACAATCTCTTTAAACCAAGTAGCCCAAGCAAGAACTAATGCACCCACCTTCACCATATTCCAAGCAAGAAACAATGCACCCCCAATCAACAGTCTCCAAAACTCTTTGAAAATGAATTTTATCGGGTATAGAAGTTGTGTAATTATGTATTGGGCTATGAATGAGGATTGTGTTTGTTTATTACTTGTTGATGTGTTGCACATGAATTTTTGTAGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGTAAACTTCCATTTTTCATGTTGCCAGCATTTTCTGTCTTTTTATATGTATAATTCTACTTTCAATCTCAGTTATTAGTAGACTTTCATATTTGTTATCGGGTCATGCAATATTTCATTTCACGTGTCATATTTTTTAGGTCCAACAAAAAGCCAACCCACCTGTCTGTAAAATCATGGACTTTCACAGAGAGAAGTACAAGCAGCAAATAAGGGAAAAGGATCGTGTTAAAAGCAAGGTGAGTTCCTGATACGAAATACAAAGTCTTAATCATGCCACAAAAATTGCATGGTGGATGACAAGATTACCATACATGTTAGGATTTAGGGAGGTTTTATTATACTTTTCAATTTTAGAGTATTATTTTTAAGGTTTTAAATTACGATTAGTTAGTGGTCATTATGGTATCGATGGACATGAGAGTTACAACCTCTCAATTGACCATAGGTTACTTTAAGATTTATTTTCAAGGGTATAAATAGTCATTCTTGTTGTTGCTTTAGTATGAGAATTTTGGATATTAAAATGAAAGTTGCATATTATGCTTCTTAAGCCATGAGGTTGTTCCTTTGCATTTCTTATGTTAAGATTTGCATGTTAGAGTCATTCAAGTAGTCTTGATCAAGCTATCTTGTAGAATAATTTGAATCACGAGTTTTCTTTACTCTTGATCTTGATCATCAAGGTAATCCGTTCCAAAACCTTCCATTGGATTGATTCTTTATCATTTTTGGAGTTCTTTGATAATTTAGATTTAAAGGTCTTGTTGTTCAACAAGGTTATTAGATCAAATCCCAAGAGCTTCATAAAAGTTCCTTAAAAGTTCCGCAAGGCAATGGGTTAGTGTCTTTTAGATAGTGATAATGCCTTTGGTCGGGATATTGTTTTGAAATCAAGAATTTATTGTTTAACTTTTGCTACTTGATCCCATGTCAGTGCTGAGCCGTATTTTATCATAAAATTATGTATTCCTTTTCATTTTGATAATGAATGAAGTGGGTATAATTCAGCCACAAGCTTGGATGATTGTAAACATCTAACATGTTTGTACTTCCTTCATGATTGCATAAATAAAACGAACAATCAAGTTGATTGTCTGAGCTTCATTATGATTGGCCATTTTAATATTATTCCACTTTTAAGTATTAGACAGACAAATCTCTAGAGCTTTGGCTTAATTTACTGAATAACCGTTTAAAAAATTGTGTCAGTTTTAGTTAATCTTTTTCCCAAAAGGAAAACCTGTTAGTATTTCAGGTCTTGAGAAATGACTCTTAAAATTTATACTGGGAAAAGTGTTGCATGTGATGTGAAACAGATTCATATTCTTGTAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGTAAGTAATTTATTTTTTAATGTTCAGACCTTTTGCTGCCATGAATATAACTTGAAGACTCTCTGATGGTGATATGATTGAATGCCTTGCGGACGGAACAGAATTTTCTATTCTAGCCTCATCAGGAAAGTAAAATTGCGTACAAAAGTCCTATGACCATGAATATTATGTTTTAAGCCATGGTTTGTACTCTAGTTCTGTACCATCCTTTTTTAAAAATGATTTCATTATAGTTTAAGATAAATGTTCTTCAAGTAATCTTCAGCAATTTGTTTCTCACTTTGATAGGTGTATATGGAATCAAGTACCCAAAAACGTTAACCTACTTATTTAAGAAACCTCTTATGGTGTTCAACCTAGTTCGTGGATGGAAACATTGAAAAGTCAAATGTGGATATCACCATAACCTATTTGTTTATAAAAGTAAAGTTTCATTTTTTTCATTCAAAATTTGAACCGTAGGCGAAGATTTTTCTGCATTTAATAATTTCCTTCAATTATTGTTACTACCCACAACATTGACATTACTTTTGGTATGTTGTCCATACCCAAAGAATTGTGAAGGATTTGGTTCATATCTCGCTACGACACCATTTTGTTGTAGTACGTACGAGGTTAAGACTACAGTTAAGACAATTTCTTTTCCGCTAAAAGAGTCCTTGAGCTCCAAACCAACCGACTTTTGACCATTATGAGAGCTTAGAACAAGACTCTTAGTATTAGTGTTTGATGCTAGAATTTCTTTATTTATTTATTTGTATTGTCTTCAGGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGGTATTATTTTTCCATCTTACAAAATGACTCATAATTTCTGTTCTTTTTAGTTTCTTATTTCTTTTCAGAGGTCAATGGTTGTTCGTTTGCGTGTTTTTTCAATACAAAATCGCCACAAAAGGCCTACCTTAGCCCACTTTCTTCTTTCCTTGTTTAGAATTGTCTGCCGTTACAATTCCCTTTAACTATAGATCTACCAACCAACCCTTGCCCAAACCCTGACCTAATAAAATTTTCACTTTCCATCCTTAATTTATTTTTGTAGTATTCTCATTAAAATGTGGTATCTTATAGGATAAGCCGATAAGAACACGCCATTTGTGTGTAAAGATCATGACCATTTGCTTGCTCTATTTATATTGTTCTTGTAATCTCTTTCTAGGTCCTGCTTTGTGAAATGTACTATTACTGCATCTGGCTGCTTCATGGTTGTTCAAATTCACGTTGTAAACATCATACTGTTCATTTTTCAATAATATCTTACTTTTATGTTATCTGAACAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGGTATTGCCTCATGAAACACTTCATTCTCTCTTGACGATACCAGTTCATCAATTTCTATTGTCTTATCCTTCCCACCGCATATACTGAACAATCTTTTTGCAGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGAGGTGAAGGTAGAACATGTTTACAGTGATTGTTTCAGTATTATATGGAAGGCTGAGTTTTGATGAGGATATTTATTTAGACATGGAACGTAGCAGAGATTTTTCTTCAAACAGTTACTACTGGCCGTGCTGTTGTGCACGTTGCAAGTTTTATAGTGATTTTGAGTAATAAGAATATTGTCCACATTAACATTTTTAATGGTCAAAGATCAAACGACGTCTCGATATTTTAGGTAGAAATCAACATTGAGAGGAGCAAGCGTTTTCGTTTGACAAAACTCAAAGTTTACGAAGTTGAGACCCTCAAAAGG

mRNA sequence

TGAGGCCAATTTCCTGTTGATGGGCTCTGGACTGGGCCGGGAATATTGAGCTGAATTTCAGGTTGGATCCGGAACCGGGTCGAGTTCGCGCTCTCAATTTCTCCCGTTGGCAAGAGCTTCGCTCGTGAGCTCTGCAACTGCGACTGCCGCGAGCCATCGTCTTGTTCCTTCGAAGCAACCCTCGCGGGAGTGTTAAATTCATCGATATTCGTTGAAGTTTGCGACGATGCTATGGTTTGGTCATAGTAACTAGGATACGATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGAGGTGAAGGTAGAACATGTTTACAGTGATTGTTTCAGTATTATATGGAAGGCTGAGTTTTGATGAGGATATTTATTTAGACATGGAACGTAGCAGAGATTTTTCTTCAAACAGTTACTACTGGCCGTGCTGTTGTGCACGTTGCAAGTTTTATAGTGATTTTGAGTAATAAGAATATTGTCCACATTAACATTTTTAATGGTCAAAGATCAAACGACGTCTCGATATTTTAGGTAGAAATCAACATTGAGAGGAGCAAGCGTTTTCGTTTGACAAAACTCAAAGTTTACGAAGTTGAGACCCTCAAAAGG

Coding sequence (CDS)

ATGGCGTTCTTATGTAGGATAAATCAATCCAAGCTAACACACTTTTCCAATCAATTCAAGAGGCATTATTTTCACATTTGTTATGCTTCTTCGATCGATTCTGGTCGTACAACGAAGCATGTTTCTGAGTATATAGCGCGTATAATTCCCCGTGGACCAGCTGATTTTGGCGGTAAAGTTAGGTTTTATGCTGCCCCGGTTCAGTTTCAGGGAAAGGCGAAGAAGGAAGAGAATAATACGAGTGGACCACGACTTAATGATAAAATCAAGGCTGAGTTTGTGAGGCTTGTATCTGATGATGGACATGCAATTGTTTCACTTCGTGAAGCTCTTGGACGTGCTCGTGAGCTCAAGCTGGATTTGGTTGAGGCTGAAGTGGGTTTAAGAAAGGGAGATCACAAAGAAGTCCGCTTCACTGGGAAAACTGAAGAAAAGGACCTAAGGATGAAAGCTGATATGGTTAAGCGATTGATGGAACGAGGATACCGTGTGAAGTGCAGTGCCAGGGGCGGTGAGGATCAGGACTTGGGTGGCTTGTTATCTCGTCTCTCTGCTTTGATAGAGGATGTGGCAATGGTGGAAAGTGGACCAAGAGTGGAAAGAGGACAGGCATATGTTATAGTCAGGCATGTTAAATTTGGCCCCTCGAAGAAAGGGGGCGGTGGAAAAGCATCAAAAGTTGCTGTGAATGCAAGACAGGAGGTTAAAAATGGCACCACCCCTCCGGTTCCGGCGGCCCGTTCTTCAACCCCTGATGAAGAAGAAATGGGTCCTGAAGAATCAGATTCTGAAGCAACGTGGTCAGTTGTTGATGGTAATAATGATTTTGATGAAGTTTTTGACTTGAAAGATGATGCCAATGGGATTCCCTTAGAAACCACTGCCAATAAAATGAATGTAGCTTCAGACAGGGATGTTAATGTCTCAGACCTTTCGCCACCGTCGCGGTTACCTGGTACGAGTAGAACCAGCTCCGTTCCACTCTCTCGACAGGATTCTTCCACCAAAGCCGATAACAGATACAAAAAGATCGAACCTGCAAACCGGTTCCAACCACCAAATGTAATGGATAACAAGGGCCGAGGTGCTAGAGACTCACTCCGATCAGAACCCCAGATTCGCAATCAGTGGAGGCAACCTCTTACGAACACAAACTTATCGCCGCCCTCCATGAGAGAAACCAGGCCAGACGACAACGTTTCTTCTGCATCAAGAAACACTACGTATCCCTCAAATGAGACATCCAAGTCTGGTTCATCACAGCATACCGTTCCTGATCCATCCAAAACTAGCTTTGGGATCTTCAGTGCTCTAAATGCCAATGCTCCAGTAAAGCAAGATGCAGCATCCACAAGTTATCGAGGGAATCGAGGGCCATCGACTAATCCGAACGCGCCTGGAGCTTCAGAAAGTTTGAAGTTCTCATTAACAAAATCCGACGACAATGTGAACAAGGGACAGAAAAGCTGGGGAATTTTCAGTGAGGGTCCTAATAATTCCCCAAACAGGATATCAAAACCTAACTGA

Protein sequence

MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPSTNPNAPGASESLKFSLTKSDDNVNKGQKSWGIFSEGPNNSPNRISKPN
Homology
[Close]
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match: IF3_GEOSL (Translation initiation factor IF-3 OS=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) GN=infC PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 9.1e-07
Identity = 51/159 (32.08%), Postives = 74/159 (46.54%), Query Frame = 1 

Query: 85  LNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVEA------------------ 144
           +N  I+A  VR+V  D     I+SL+EAL  A   +LDLVE                   
Sbjct: 8   INQAIRAREVRVVGADSEQLGIMSLQEALALAEARQLDLVEVSPTAVPPVCRIMDYGKFK 67

Query: 145 -------EVGLRKGDH---KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RGGE 204
                  +   +K  H   KEV+   KT+E DL  K   V+R +E G + K +   RG E
Sbjct: 68  YQQSKKLQEARKKQSHVQVKEVKLRPKTDEHDLMTKIKHVRRFIEEGNKAKVTLVFRGRE 127

Query: 205 DQDL---GGLLSRLSALIEDVAMVESGPRVERGQAYVIV 209
              L      L R++A +ED+A+VE  P++E    ++IV
Sbjct: 128 ITHLEFGSRALDRVAAELEDIAVVEFKPKMEGRSMFMIV 166

[Close]
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match: IF3_ACIAD (Translation initiation factor IF-3 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=infC PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 1.6e-06
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+++ VRLV  DG    IVSL EAL  A E++LDLVE                 
Sbjct: 17  PAINDEIRSKEVRLVGADGEQKGIVSLNEALRAAEEVELDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + +  +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVTEYGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match: IF3_ACIBS (Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain SDF) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+A+ VRLV  DG    IVSL EAL  A +  LDLVE                 
Sbjct: 17  PAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + ++ +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match: IF3_ACIBY (Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain AYE) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 80/171 (46.78%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +ND+I+A+ VRLV  DG    IVSL EAL  A +  LDLVE                 
Sbjct: 17  PAINDEIRAKEVRLVGADGEQKGIVSLNEALRAAEDADLDLVEIVANAEPPVCKIMDYNK 76

Query: 143 -------AEVGLRKGDH----KEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                   +   +K  H    KE++    T+  D ++K   + + +E G +VK +   RG
Sbjct: 77  HLFDLKQKQKDAKKKQHQVQVKEIKLRPATDVGDYQVKLRAILKFLEEGNKVKITLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q LG   L ++ A + ++ +VE  P++E  Q  +++     GP KK
Sbjct: 137 REMAHQQLGLAQLQKIEADVAELGVVEQAPKMEGRQMGMLL-----GPKKK 182

[Close]
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match: IF3_PSEAE (Translation initiation factor IF-3 OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=infC PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-06
Identity = 52/171 (30.41%), Postives = 77/171 (45.03%), Query Frame = 1 

Query: 83  PRLNDKIKAEFVRLVSDDGH--AIVSLREALGRARELKLDLVE----------------- 142
           P +N+ I A  VRL+  DG    +VS+ EA+  A E KLDLVE                 
Sbjct: 17  PPINENISAREVRLIGADGQQVGVVSIDEAIRLAEEAKLDLVEISADAVPPVCRIMDYGK 76

Query: 143 -----------AEVGLRKGDHKEVRFTGKTEEKDLRMKADMVKRLMERGYRVKCSA--RG 202
                      A+   ++   KE++F   TEE D ++K   + R +  G + K S   RG
Sbjct: 77  HLFEKKKQAAVAKKNQKQAQVKEIKFRPGTEEGDYQVKLRNLVRFLSEGDKAKVSLRFRG 136

Query: 203 GE--DQDLG-GLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFGPSKK 219
            E   Q+LG  LL R+ A + +   VE  P++E  Q  +++      P KK
Sbjct: 137 REMAHQELGMELLKRVEADLVEYGTVEQHPKLEGRQLMMVI-----APKKK 182

[Close]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match: A0A0A0LJ90_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270880 PE=4 SV=1)

HSP 1 Score: 512.7 bits (1319), Expect = 5.2e-142
Identity = 315/576 (54.69%), Postives = 369/576 (64.06%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CRI+QSKL  F +QFKRHYF I +++++DS RTT +V  Y+ RI PR PADF  K 
Sbjct: 1   MAFFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTHNVYGYVERI-PRRPADFADKF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------ 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA      
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLD 120

Query: 121 ---------------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDL 180
                                      RE      + E+ ++K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++I
Sbjct: 181 RMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDV--------------------- 360
           +V DG +D DE FDLKDD N I   T   KMNV SDRDV                     
Sbjct: 301 TV-DGTSDSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTD 360

Query: 361 -------NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------ 420
                   ++   PP+         S P  R+  +      A +RY +            
Sbjct: 361 NRPKKIEPMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQI 420

Query: 421 IEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSA 480
            EP NRFQPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S 
Sbjct: 421 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSV 480

Query: 481 SRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS--- 496
           SRN  + SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    
Sbjct: 481 SRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTR 540

[Close]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match: F6I0Y8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g02640 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86
Identity = 237/529 (44.80%), Postives = 303/529 (57.28%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTH--FSNQFKRHYFHICYASSIDSG-RTTKHVSEYIARIIPRGPADFG 60
           M+F  RINQ KL     + QFKR    I +A S+++  R T    E    +  R P+DF 
Sbjct: 1   MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQTIRGFENPCWVNRRNPSDFC 60

Query: 61  GKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAREL 120
             VRF+AAPVQ   K K+EE + SGPR+ND+I+A+FVRLV+DDGH IVS   AL RAR+L
Sbjct: 61  YNVRFFAAPVQ--AKPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKL 120

Query: 121 K-----------------LDL----------------VEAEVGLRKGDHKEVRFTGKTEE 180
           K                 +D                  ++E+ LRKGD KEVRF+GKTE 
Sbjct: 121 KLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQA 240
           KDL+MKADMVKRLM+RGYRVKC A G EDQDLGGLL+RLS+LIEDV  VESGPRVE+ QA
Sbjct: 181 KDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQA 240

Query: 241 YVIVRHVKFGPSKKGGGGKASKVA-----------------VNARQEVKNGTTPPVPA-- 300
           YVIVRH+KFGPSKKG G KASKV                  +N    V++     V +  
Sbjct: 241 YVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDT 300

Query: 301 ARSSTPDEEEMGPEESDS----------------EATWSVVDGNNDFDEVFDLKDDAN-- 360
           A S   +E+E+  +E+D+                +ATWSV D N+DFD+VFD  +DAN  
Sbjct: 301 AESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDANPS 360

Query: 361 -GIPLETTANKMNVASDRDVNVSDLSP-PSRLPGTSRTSSVPLSRQDSSTKADNRYKKIE 420
                +T A     +S  ++N+SD+   P  +  ++RT+SVP S  +   +  NRY+K E
Sbjct: 361 NSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYRKSE 420

Query: 421 PANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASR 455
           P NRF P   MDNKG GA +SLR  PQ  NQ +Q  ++TN S PS   TR D   +S  R
Sbjct: 421 PRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTN-SSPSTGRTRQDGTDASVFR 480

[Close]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match: A0A067FLH8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009379mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 3.0e-81
Identity = 231/552 (41.85%), Postives = 294/552 (53.26%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CR NQS+L H ++QFKR+Y  +   +   S        +       + P DF   V
Sbjct: 1   MAFSCRTNQSRLKHLTHQFKRYYIQVPSLNHSISHTKICEAKKPFWESAVKTPNDFCNNV 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLD 120
           RF+AAPVQ Q   KK+E  TSGPRLNDKI A+FVRLV D+GH +VS  EAL  AR L+ D
Sbjct: 61  RFFAAPVQAQ--QKKDEKETSGPRLNDKINAQFVRLVLDEGHKVVSRHEALALARSLQCD 120

Query: 121 LVEA---------------------------------EVGLRKGDHKEVRFTGKTEEKDL 180
           LVE                                  ++ L+KGD KEVRF+GK E+KDL
Sbjct: 121 LVEVDRKANPPVCKIMDFHKEKYQKELKEKDRAKAKSDITLKKGDCKEVRFSGKIEQKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSA----RGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQ 240
           +MKAD VKRLM++GYRVKC A    +  E +DLGG LSRL  LIED+++VESGP VER Q
Sbjct: 181 QMKADTVKRLMDKGYRVKCMALPVGKKEETEDLGGYLSRLIDLIEDISVVESGPHVERKQ 240

Query: 241 AYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARS---STP-----DEEE 300
           AY I+RHVKFGPSKKGG  K    AV     V    TP     RS    TP     D  E
Sbjct: 241 AYAIIRHVKFGPSKKGGLKKLK--AVGDTSGVSKAATPSSTIERSVDIPTPAIHEEDPAE 300

Query: 301 MGPEESDSEAT-WSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASD-----RDVNVS 360
            G E+ + + T WSV + N+D +EVFDL D A G+    T   MN A +       ++ S
Sbjct: 301 FGLEKIEKKNTPWSVSNSNDDLNEVFDLADGAKGLTSNFTPKVMNAAPESASPPASISAS 360

Query: 361 DLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRS 420
           + S P   P  SR  ++  +    S    NRY + E  N+F P   +DN G G R+S RS
Sbjct: 361 NFSHPKPAPNFSRADTLGSTPHGPSLGTGNRYARSEQKNQF-PQKPIDNLGSGTRESFRS 420

Query: 421 EPQIRNQWRQPLTNTNL-SPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPS 480
           EPQ  +Q RQP    N+ + PSM E +P    +S  RN+  P++ +S        VP+  
Sbjct: 421 EPQFPSQRRQPPPPPNMNASPSMGEKKPIGTEASNFRNSRLPNSISS-------DVPNTR 480

Query: 481 KTSFGIFSALNANAPVKQDAASTSYR------GNRGPSTNPNAPGASESLKFSLTKSDDN 495
            +S+GIFS   ANAP  Q  A+   +      G  G   N N+PG       S T   DN
Sbjct: 481 ASSYGIFSNPTANAPTGQGMAADRTKEGIPTQGTAGVRPNQNSPGLKSD--GSQTPGPDN 535

[Close]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match: V4RN77_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028168mg PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.9e-80
Identity = 230/552 (41.67%), Postives = 293/552 (53.08%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CR NQS+L H ++QFKR+Y  +   +   S        +       + P DF   V
Sbjct: 1   MAFSCRTNQSRLKHLTHQFKRYYIQVPSLNHSISHTKICEAKKPFWESAVKTPNDFCNNV 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARELKLD 120
           RF+AAPVQ Q   KK+E  TSGPRLNDKI A+FVRLV D+GH +VS  EAL  AR L+ D
Sbjct: 61  RFFAAPVQAQ--QKKDEKETSGPRLNDKINAQFVRLVLDEGHKVVSRHEALALARSLQCD 120

Query: 121 LVEA---------------------------------EVGLRKGDHKEVRFTGKTEEKDL 180
           LVE                                  ++ L+KGD KEVRF+GK E+KDL
Sbjct: 121 LVEVDRKANPPVCKIMDFHKEKYHKELKEKDRAKAKSDITLKKGDCKEVRFSGKIEQKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSA----RGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQ 240
           +MKAD VKRLM++GYRVKC A    +  E +DLGG LSRL  LIED+++VESGP VER Q
Sbjct: 181 QMKADTVKRLMDKGYRVKCMALPVGKKEETEDLGGYLSRLIDLIEDISVVESGPHVERKQ 240

Query: 241 AYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARS---STP-----DEEE 300
           AY I+RHVKFGPSKKGG  K    AV     V    TP     RS    TP     D  E
Sbjct: 241 AYAIIRHVKFGPSKKGGLKKLK--AVGDTSGVSKAATPSSTIERSVDIPTPAIHEEDPAE 300

Query: 301 MGPEESDSEAT-WSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASD-----RDVNVS 360
            G E+ + + T WSV + N+D +EVFDL D A G+    T   MN A +       ++ S
Sbjct: 301 FGLEKIEKKNTPWSVSNSNDDLNEVFDLADGAKGLTSNFTPKVMNAAPESASPPASISAS 360

Query: 361 DLSPPSRLPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNKGRGARDSLRS 420
           + S P   P  SR  ++  +    S    NRY + E  N+F P   +DN G G R+S RS
Sbjct: 361 NFSHPKPAPNFSRADTLGSTPHGPSLGTGNRYARSEQKNQF-PQKPIDNLGSGMRESFRS 420

Query: 421 EPQIRNQWRQPLTNTNL-SPPSMRETRPDDNVSSASRNTTYPSNETSKSGSSQHTVPDPS 480
           EPQ  +Q RQP    N+ + PSM E +P    +S  RN+  P++  S        VP+  
Sbjct: 421 EPQFPSQRRQPPPPPNMNASPSMGEKKPIGTEASNFRNSRLPNSMPS-------DVPNTR 480

Query: 481 KTSFGIFSALNANAPVKQDAASTSYR------GNRGPSTNPNAPGASESLKFSLTKSDDN 495
            +S+GIFS   ANAP  Q  A+   +      G  G   N ++PG       S T   DN
Sbjct: 481 ASSYGIFSNPTANAPTGQGMAADRTKEGIPTQGTAGVRPNQSSPGLKSD--GSQTPGPDN 535

[Close]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match: A0A061E5R4_THECC (Translation initiation factor 3 family protein, putative isoform 1 OS=Theobroma cacao GN=TCM_006587 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 6.4e-76
Identity = 237/582 (40.72%), Postives = 310/582 (53.26%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTT---KHVSEYIARIIPRGPADFG 60
           MAF CRINQS+L   SNQ++R YF   YASSID  RT+   K VS    R     P+ F 
Sbjct: 1   MAFWCRINQSRLQLISNQYRRFYFQTPYASSIDPIRTSVLGKPVSSIDGR-----PSYFY 60

Query: 61  GKVRFYAAPVQFQGKAK-KEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRARE 120
           G VRF+AAPVQ  GK   KEE +    RLN++IKA+ +RLV+++GH I+ + EAL RA+ 
Sbjct: 61  GNVRFFAAPVQ--GKYNNKEEPSKFEKRLNEQIKADVIRLVTEEGHEIIPIHEALRRAKV 120

Query: 121 LKLDLVEAEVG---------------------------------LRKGDHKEVRFTGKTE 180
           L LDLVE +                                   L+KG+ KE+RFTGK E
Sbjct: 121 LDLDLVEVQKSANPPVCKLMDYNQERYKRRVMEKDRAKSKSGKALKKGECKEIRFTGKIE 180

Query: 181 EKDLRMKADMVKRLMERGYRVKCSARG----GEDQDLGGLLSRLSALIEDVAMVESGPRV 240
            KD++MKAD V RLMERGYRVKC A G     ED+DLGGLLSRL+ LI+DV++VESGPRV
Sbjct: 181 AKDIKMKADSVIRLMERGYRVKCMAMGKGKEDEDEDLGGLLSRLTDLIQDVSVVESGPRV 240

Query: 241 ERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVP----------AARSS 300
           ER QAYV+VRHVKFGP KK GGGK SKV  + + E K    P VP          +    
Sbjct: 241 ERKQAYVVVRHVKFGPLKK-GGGKTSKVVEDTKAEPK----PMVPEDDSIESISESENEI 300

Query: 301 TPDEEEM---------GPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNV 360
             DE+++         G    D +  WSV +  +DFD++F+L    NG     + +K   
Sbjct: 301 LSDEDDLPRSSPMQMQGKNFEDKKTAWSVSESGDDFDKLFNL----NGGFSSNSTSKGIH 360

Query: 361 ASDRDVNVSDLSPPSR-LPGTSRTSSVPLSRQDSSTKADNRYKKIEPANRFQPPNVMDNK 420
           A+   VN S     S+ L      +S   S  D+S   +NRY+K EP N+F P   M + 
Sbjct: 361 AAQHTVNSSRNDFASKFLHPKPVANSTEYSHPDTSLGTENRYRKSEPRNQFPPARSMGHM 420

Query: 421 GRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYPSNETSKSGS 480
           G+  R+S RSEP+   Q +Q   N N S  S+ ET+   N +S  RN    +N+  K   
Sbjct: 421 GQNTRESGRSEPRFSYQRQQAPQNMNAS-SSLGETKQVGNDASLVRNLRPQTNDLPKQRP 480

Query: 481 SQHTVPDPSKTSFGIFSALNANAPVKQDAAST---SYRGNR----------GPSTNPNAP 509
           S   VP     SFGIFS   AN+  KQ   +    S  GNR          G    PN P
Sbjct: 481 SHSDVPGTPAPSFGIFSTPTANSSGKQGIGAEVHGSKEGNRYASLRNCGLGGNGATPNFP 540

[Close]
BLAST of Cp4.1LG05g13610 vs. TAIR10
Match: AT1G34360.1 (AT1G34360.1 translation initiation factor 3 (IF-3) family protein)

HSP 1 Score: 131.7 bits (330), Expect = 1.3e-30
Identity = 160/532 (30.08%), Postives = 231/532 (43.42%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYF-HICYASSIDSGRTTKHVSEYIARIIPRG-----PA 60
           MA    IN+S L + SNQ  R+Y+  +C ASS    + T  +S +    IP       P+
Sbjct: 1   MAIWRIINRSYLKYASNQLTRNYYTQVCLASSTHVVKQTTKLSSFD---IPNSDICTRPS 60

Query: 61  DFGGKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA 120
           +    +RF A   Q   + K+ E ++ GPRLN+KI  ++VRLVS++GH +VSLREAL RA
Sbjct: 61  NIFQNLRFLATSAQT--RKKEAEVDSDGPRLNEKITGDYVRLVSEEGHCVVSLREALRRA 120

Query: 121 RELKLDLVE----------------------AEVGLRKG----------DHKEVRFTGKT 180
           +EL+ DLVE                      A+VG  +           D KE+RFT K 
Sbjct: 121 KELQCDLVEVQRDAKPPVCKIVKYSLELYKKAKVGKERAKAKRAEAIRPDIKEIRFTPKI 180

Query: 181 EEKDLRMKADMVKRLMERGYRVKCSARGGED-------QDLGGLLSRLSALIEDVAMVES 240
           E KDL+ K+D   +LME GYRVKC A   +D       + L  LL R +  I D A+VES
Sbjct: 181 EAKDLKFKSDQALKLMESGYRVKCLAVPDKDKHKELEPEKLLELLFRFTCFIGD-ALVES 240

Query: 241 GPRVERGQAYVIVRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEE 300
            P  +R  A VIVRH KFGP KKGG      + + + +  +    P    A  +T D++E
Sbjct: 241 WPEADRKGAVVIVRHAKFGPPKKGGVKLMKDIDIKSARVKEESPKPDSSKAGVATVDDQE 300

Query: 301 MGPEESDSEATWSVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPS 360
              +   SE  +SV              + A  +  +    K   +S+     S     S
Sbjct: 301 ---DIEKSEPRFSV--------------EQAQPVKFQNAYAKREPSSE----FSGGRDAS 360

Query: 361 RLPGTSRTSSVPLSRQDSSTKADNRYK--KIEPANRFQPPNVMDNKGRGARDSLRSEPQI 420
           R    S    V   R   S +A N+    + +P +  QPP+    +    + + R +PQ 
Sbjct: 361 RFEPQSPNQHVNPQRPRFSNQAPNQQPTGRFDPQSPNQPPSAPRPQFPNQQPTGRFDPQF 420

Query: 421 RNQWRQP-LTNTNLSPPSMRETRPD-DNVSSASRNTTYPSNETSK--SGSSQHTVPD--- 470
            +Q  +P   N   +  S     P   N   +   + +P    ++  SG S +  PD   
Sbjct: 421 PSQPPRPQFPNQAPNQQSTGRFNPQFPNQRPSPPQSRFPDQAPNQQPSGPSPNRHPDRQG 480

[Close]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match: gi|449458680|ref|XP_004147075.1| (PREDICTED: uncharacterized protein LOC101207030 isoform X1 [Cucumis sativus])

HSP 1 Score: 512.7 bits (1319), Expect = 7.4e-142
Identity = 315/576 (54.69%), Postives = 369/576 (64.06%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MAF CRI+QSKL  F +QFKRHYF I +++++DS RTT +V  Y+ RI PR PADF  K 
Sbjct: 1   MAFFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTHNVYGYVERI-PRRPADFADKF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------ 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA      
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLD 120

Query: 121 ---------------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDL 180
                                      RE      + E+ ++K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           RMKADMVKRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++I
Sbjct: 181 RMKADMVKRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDV--------------------- 360
           +V DG +D DE FDLKDD N I   T   KMNV SDRDV                     
Sbjct: 301 TV-DGTSDSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTD 360

Query: 361 -------NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------ 420
                   ++   PP+         S P  R+  +      A +RY +            
Sbjct: 361 NRPKKIEPMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQI 420

Query: 421 IEPANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSA 480
            EP NRFQPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S 
Sbjct: 421 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSV 480

Query: 481 SRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS--- 496
           SRN  + SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    
Sbjct: 481 SRNINHSSNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTR 540

[Close]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match: gi|659115751|ref|XP_008457718.1| (PREDICTED: uncharacterized protein LOC103497345 isoform X1 [Cucumis melo])

HSP 1 Score: 497.3 bits (1279), Expect = 3.2e-137
Identity = 311/582 (53.44%), Postives = 370/582 (63.57%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTHFSNQFKRHYFHICYASSIDSGRTTKHVSEYIARIIPRGPADFGGKV 60
           MA  CRI+QSKL  F +QFKRHYF I +++++DS RTT HV  Y+ RI PR PADF    
Sbjct: 1   MALFCRISQSKLKSFLDQFKRHYFQISHSAALDSRRTTNHVYRYVERI-PRRPADFADNF 60

Query: 61  RFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAR----- 120
           RFYAAPVQFQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+ LREAL RAR     
Sbjct: 61  RFYAAPVQFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILPLREALERARELKLD 120

Query: 121 -----------ELKL---------------DLVEAEVGL--RKGDHKEVRFTGKTEEKDL 180
                        KL               D V+++V L  +K  HKEVRFTGKTEEKDL
Sbjct: 121 LVEVQQKANPPVCKLMDFHREKYKKQIREKDRVKSKVELVMKKAGHKEVRFTGKTEEKDL 180

Query: 181 RMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVI 240
           +MKADMVKRLMERGYRVKC+ARG E+QDLG LLSRLSA+IEDVA+VESGP VE+GQA++I
Sbjct: 181 KMKADMVKRLMERGYRVKCTARGDENQDLGALLSRLSAMIEDVALVESGPSVEKGQAFII 240

Query: 241 VRHVKFGPSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATW 300
           VRHVKFGPSKKGGG KASKVA NA Q+V+NG+TPP+ A     P+++     ES  E TW
Sbjct: 241 VRHVKFGPSKKGGGSKASKVAANAEQKVQNGSTPPISAV---DPEDDA----ESSEETTW 300

Query: 301 SVVDGNNDFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVP 360
            V DG +D DE FDLKDD + I   T   KMNV SDRDV   D    S +P     SS+ 
Sbjct: 301 RV-DGTSDCDEAFDLKDDRDVITSTTATKKMNVVSDRDV--PDSGRTSSVPLFREDSSIK 360

Query: 361 LSRQDSSTKADNRYKKI---------------------EPANRFQPPNVMDNKGRGARDS 420
           +  +    +  NR++                       EP NRFQPPNV D   +GARDS
Sbjct: 361 IDNRPKKIEPMNRFQPPNVTDRYSQGARDSLRSGPQIREPMNRFQPPNVTDRYSQGARDS 420

Query: 421 LRSEPQIR---NQWRQP---------LTNTNLSPPSMRETR----PD------------- 480
           LRSEPQIR   N+++ P           ++  S P +R+ R    P+             
Sbjct: 421 LRSEPQIREPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSPTMRETRQY 480

Query: 481 DNVSSASRNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNR 496
           DN +S SRN  + SN TSK G S HT   PSKTSFGIFS+ N+NAP KQD  +T Y+GNR
Sbjct: 481 DNNTSVSRNINHSSNATSKPGPSHHTDSSPSKTSFGIFSSPNSNAPGKQDPPATGYQGNR 540

[Close]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match: gi|778669790|ref|XP_011649302.1| (PREDICTED: uncharacterized protein LOC101207030 isoform X2 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 4.8e-117
Identity = 272/509 (53.44%), Postives = 318/509 (62.48%), Query Frame = 1 

Query: 68  QFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRA------------- 127
           +FQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+SLR+AL RA             
Sbjct: 4   KFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILSLRDALKRARELKLDLVEVQQK 63

Query: 128 --------------------RELKLDLVEAEVGLRKGDHKEVRFTGKTEEKDLRMKADMV 187
                               RE      + E+ ++K  HKEVRFTGKTEEKDLRMKADMV
Sbjct: 64  ANPPVCKLMDFHREKYKKQIREKDRVKSKVEMVMKKAGHKEVRFTGKTEEKDLRMKADMV 123

Query: 188 KRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFG 247
           KRLMERGYRVKC+ARGGE+QDLG LLSRL+ALIEDVA+VE+GP VE+GQA++IVRHVKFG
Sbjct: 124 KRLMERGYRVKCTARGGENQDLGALLSRLTALIEDVALVENGPSVEKGQAFIIVRHVKFG 183

Query: 248 PSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNN 307
           PSKKGGG KASKV  NA Q+V+NG+TP V     ST D E+    ES  E TW+V DG +
Sbjct: 184 PSKKGGGSKASKVVANAEQKVQNGSTPLV-----STVDPED--GFESSEETTWTV-DGTS 243

Query: 308 DFDEVFDLKDDANGIPLETTANKMNVASDRDV---------------------------- 367
           D DE FDLKDD N I   T   KMNV SDRDV                            
Sbjct: 244 DSDEAFDLKDDRNVITSTTATKKMNVVSDRDVPDSGRTSSVPLFQQDSSIKTDNRPKKIE 303

Query: 368 NVSDLSPPSRLPGTSRTSSVPLSRQDSST----KADNRYKK------------IEPANRF 427
            ++   PP+         S P  R+  +      A +RY +             EP NRF
Sbjct: 304 PMNHFQPPNSQGARDSLRSGPQIREPVNRFQPPNATDRYSQGARDSLRSEPQIREPMNRF 363

Query: 428 QPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASRNTTYP 487
           QPPNV D   RGARDSLRSEPQIR+Q   P  NTN SP +MRE+R  DN +S SRN  + 
Sbjct: 364 QPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSP-TMRESRQYDNNTSVSRNINHS 423

Query: 488 SNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGPS----TNPNAP 496
           SN TS    S H+   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP     TNPNAP
Sbjct: 424 SNSTSTPAPSHHSDSSPSKTSFGIFSSSNSNAPGKQDPPATGYQGNRGPPYTRLTNPNAP 483

[Close]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match: gi|659115753|ref|XP_008457719.1| (PREDICTED: uncharacterized protein LOC103497345 isoform X2 [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 1.2e-112
Identity = 269/515 (52.23%), Postives = 321/515 (62.33%), Query Frame = 1 

Query: 68  QFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAR------------ 127
           +FQG AKKEE + SGPRLNDKIKA+FVRLVSDDGH I+ LREAL RAR            
Sbjct: 4   KFQGNAKKEEKDKSGPRLNDKIKADFVRLVSDDGHTILPLREALERARELKLDLVEVQQK 63

Query: 128 ----ELKL---------------DLVEAEVGL--RKGDHKEVRFTGKTEEKDLRMKADMV 187
                 KL               D V+++V L  +K  HKEVRFTGKTEEKDL+MKADMV
Sbjct: 64  ANPPVCKLMDFHREKYKKQIREKDRVKSKVELVMKKAGHKEVRFTGKTEEKDLKMKADMV 123

Query: 188 KRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQAYVIVRHVKFG 247
           KRLMERGYRVKC+ARG E+QDLG LLSRLSA+IEDVA+VESGP VE+GQA++IVRHVKFG
Sbjct: 124 KRLMERGYRVKCTARGDENQDLGALLSRLSAMIEDVALVESGPSVEKGQAFIIVRHVKFG 183

Query: 248 PSKKGGGGKASKVAVNARQEVKNGTTPPVPAARSSTPDEEEMGPEESDSEATWSVVDGNN 307
           PSKKGGG KASKVA NA Q+V+NG+TPP+ A     P+++     ES  E TW V DG +
Sbjct: 184 PSKKGGGSKASKVAANAEQKVQNGSTPPISAV---DPEDDA----ESSEETTWRV-DGTS 243

Query: 308 DFDEVFDLKDDANGIPLETTANKMNVASDRDVNVSDLSPPSRLPGTSRTSSVPLSRQDSS 367
           D DE FDLKDD + I   T   KMNV SDRDV   D    S +P     SS+ +  +   
Sbjct: 244 DCDEAFDLKDDRDVITSTTATKKMNVVSDRDV--PDSGRTSSVPLFREDSSIKIDNRPKK 303

Query: 368 TKADNRYKKI---------------------EPANRFQPPNVMDNKGRGARDSLRSEPQI 427
            +  NR++                       EP NRFQPPNV D   +GARDSLRSEPQI
Sbjct: 304 IEPMNRFQPPNVTDRYSQGARDSLRSGPQIREPMNRFQPPNVTDRYSQGARDSLRSEPQI 363

Query: 428 R---NQWRQP---------LTNTNLSPPSMRETR----PD-------------DNVSSAS 487
           R   N+++ P           ++  S P +R+ R    P+             DN +S S
Sbjct: 364 REPMNRFQPPNVTDRYSRGARDSLRSEPQIRDQRWHPPPNTNFSPTMRETRQYDNNTSVS 423

Query: 488 RNTTYPSNETSKSGSSQHTVPDPSKTSFGIFSALNANAPVKQDAASTSYRGNRGP----S 496
           RN  + SN TSK G S HT   PSKTSFGIFS+ N+NAP KQD  +T Y+GNRGP    S
Sbjct: 424 RNINHSSNATSKPGPSHHTDSSPSKTSFGIFSSPNSNAPGKQDPPATGYQGNRGPPYTRS 483

[Close]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match: gi|297744586|emb|CBI37848.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 327.8 bits (839), Expect = 3.4e-86
Identity = 237/529 (44.80%), Postives = 303/529 (57.28%), Query Frame = 1 

Query: 1   MAFLCRINQSKLTH--FSNQFKRHYFHICYASSIDSG-RTTKHVSEYIARIIPRGPADFG 60
           M+F  RINQ KL     + QFKR    I +A S+++  R T    E    +  R P+DF 
Sbjct: 1   MSFWHRINQPKLKWQTLTRQFKRCSLQIPHAHSLNNTPRQTIRGFENPCWVNRRNPSDFC 60

Query: 61  GKVRFYAAPVQFQGKAKKEENNTSGPRLNDKIKAEFVRLVSDDGHAIVSLREALGRAREL 120
             VRF+AAPVQ   K K+EE + SGPR+ND+I+A+FVRLV+DDGH IVS   AL RAR+L
Sbjct: 61  YNVRFFAAPVQ--AKPKQEEKDASGPRMNDQIRADFVRLVTDDGHEIVSRMVALERARKL 120

Query: 121 K-----------------LDL----------------VEAEVGLRKGDHKEVRFTGKTEE 180
           K                 +D                  ++E+ LRKGD KEVRF+GKTE 
Sbjct: 121 KLDLVEVQRKADPPVCKIMDFHREKYKQQIKEKDRTKSKSELTLRKGDCKEVRFSGKTEA 180

Query: 181 KDLRMKADMVKRLMERGYRVKCSARGGEDQDLGGLLSRLSALIEDVAMVESGPRVERGQA 240
           KDL+MKADMVKRLM+RGYRVKC A G EDQDLGGLL+RLS+LIEDV  VESGPRVE+ QA
Sbjct: 181 KDLKMKADMVKRLMDRGYRVKCMAMGTEDQDLGGLLTRLSSLIEDVCFVESGPRVEKRQA 240

Query: 241 YVIVRHVKFGPSKKGGGGKASKVA-----------------VNARQEVKNGTTPPVPA-- 300
           YVIVRH+KFGPSKKG G KASKV                  +N    V++     V +  
Sbjct: 241 YVIVRHIKFGPSKKGSGKKASKVVGVTSSEAATMSPTISPTINPSSHVESPIQLEVESDT 300

Query: 301 ARSSTPDEEEMGPEESDS----------------EATWSVVDGNNDFDEVFDLKDDAN-- 360
           A S   +E+E+  +E+D+                +ATWSV D N+DFD+VFD  +DAN  
Sbjct: 301 AESDLENEDEVLSDEADTPISPSMRMADKNLEDNKATWSVFDANDDFDKVFDFTNDANPS 360

Query: 361 -GIPLETTANKMNVASDRDVNVSDLSP-PSRLPGTSRTSSVPLSRQDSSTKADNRYKKIE 420
                +T A     +S  ++N+SD+   P  +  ++RT+SVP S  +   +  NRY+K E
Sbjct: 361 NSTDKQTNAKLETSSSLENINLSDIMHGPRPVLDSTRTNSVPSSLTEPPPETLNRYRKSE 420

Query: 421 PANRFQPPNVMDNKGRGARDSLRSEPQIRNQWRQPLTNTNLSPPSMRETRPDDNVSSASR 455
           P NRF P   MDNKG GA +SLR  PQ  NQ +Q  ++TN S PS   TR D   +S  R
Sbjct: 421 PRNRFMPTTSMDNKGPGATNSLRLGPQFLNQGKQARSDTN-SSPSTGRTRQDGTDASVFR 480

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g13610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
IF3_GEOSL9.1e-0732.08Translation initiation factor IF-3 OS=Geobacter sulfurreducens (strain ATCC 5157... [more]
IF3_ACIAD1.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baylyi (strain ATCC 33305 / ... [more]
IF3_ACIBS2.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain SDF) GN=in... [more]
IF3_ACIBY2.6e-0630.41Translation initiation factor IF-3 OS=Acinetobacter baumannii (strain AYE) GN=in... [more]
IF3_PSEAE2.6e-0630.41Translation initiation factor IF-3 OS=Pseudomonas aeruginosa (strain ATCC 15692 ... [more]
BLAST of Cp4.1LG05g13610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJ90_CUCSA5.2e-14254.69Uncharacterized protein OS=Cucumis sativus GN=Csa_2G270880 PE=4 SV=1[more]
F6I0Y8_VITVI2.4e-8644.80Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0038g02640 PE=4 SV=... [more]
A0A067FLH8_CITSI3.0e-8141.85Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g009379mg PE=4 SV=1[more]
V4RN77_9ROSI1.9e-8041.67Uncharacterized protein OS=Citrus clementina GN=CICLE_v10028168mg PE=4 SV=1[more]
A0A061E5R4_THECC6.4e-7640.72Translation initiation factor 3 family protein, putative isoform 1 OS=Theobroma ... [more]
BLAST of Cp4.1LG05g13610 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G34360.11.3e-3030.08 translation initiation factor 3 (IF-3) family protein[more]
BLAST of Cp4.1LG05g13610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449458680|ref|XP_004147075.1|7.4e-14254.69PREDICTED: uncharacterized protein LOC101207030 isoform X1 [Cucumis sativus][more]
gi|659115751|ref|XP_008457718.1|3.2e-13753.44PREDICTED: uncharacterized protein LOC103497345 isoform X1 [Cucumis melo][more]
gi|778669790|ref|XP_011649302.1|4.8e-11753.44PREDICTED: uncharacterized protein LOC101207030 isoform X2 [Cucumis sativus][more]
gi|659115753|ref|XP_008457719.1|1.2e-11252.23PREDICTED: uncharacterized protein LOC103497345 isoform X2 [Cucumis melo][more]
gi|297744586|emb|CBI37848.3|3.4e-8644.80unnamed protein product [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003743translation initiation factor activity
Vocabulary: INTERPRO
TermDefinition
IPR019815Translation_initiation_fac_3_C
IPR019814Translation_initiation_fac_3_N
IPR001288Translation_initiation_fac_3
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006413 translational initiation
cellular_component GO:0005840 ribosome
cellular_component GO:0005575 cellular_component
molecular_function GO:0003743 translation initiation factor activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g13610.1Cp4.1LG05g13610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 1..287
score: 1.5
IPR019814Translation initiation factor 3, N-terminalGENE3DG3DSA:3.10.20.80coord: 81..124
score: 3.
IPR019814Translation initiation factor 3, N-terminalPFAMPF05198IF3_Ncoord: 85..124
score: 2.
IPR019814Translation initiation factor 3, N-terminalunknownSSF54364Translation initiation factor IF3, N-terminal domaincoord: 82..126
score: 1.
IPR019815Translation initiation factor 3, C-terminalGENE3DG3DSA:3.30.110.10coord: 132..212
score: 3.2
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 133..208
score: 5.
IPR019815Translation initiation factor 3, C-terminalunknownSSF55200Translation initiation factor IF3, C-terminal domaincoord: 133..212
score: 3.92
NoneNo IPR availablePANTHERPTHR10938:SF2SUBFAMILY NOT NAMEDcoord: 1..287
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g13610Cucsa.234150Cucumber (Gy14) v1cgycpeB0617
Cp4.1LG05g13610CmaCh20G007410Cucurbita maxima (Rimu)cmacpeB579
Cp4.1LG05g13610CmaCh02G002680Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g13610CmoCh02G002650Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g13610CmoCh20G007390Cucurbita moschata (Rifu)cmocpeB528
Cp4.1LG05g13610Cla020266Watermelon (97103) v1cpewmB747
Cp4.1LG05g13610Csa2G270880Cucumber (Chinese Long) v2cpecuB711
Cp4.1LG05g13610MELO3C020828Melon (DHL92) v3.5.1cpemeB658
Cp4.1LG05g13610ClCG02G012030Watermelon (Charleston Gray)cpewcgB661
Cp4.1LG05g13610CSPI02G13680Wild cucumber (PI 183967)cpecpiB713
Cp4.1LG05g13610Lsi10G005050Bottle gourd (USVL1VR-Ls)cpelsiB600
Cp4.1LG05g13610MELO3C020828.2Melon (DHL92) v3.6.1cpemedB788
Cp4.1LG05g13610CsaV3_2G016200Cucumber (Chinese Long) v3cpecucB0888
Cp4.1LG05g13610Bhi10G001444Wax gourdcpewgoB0949
Cp4.1LG05g13610CsGy2G013560Cucumber (Gy14) v2cgybcpeB248
Cp4.1LG05g13610Carg05186Silver-seed gourdcarcpeB1139
Cp4.1LG05g13610Carg16163Silver-seed gourdcarcpeB0488
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG05g13610Cp4.1LG16g03250Cucurbita pepo (Zucchini)cpecpeB318
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g13610Cucurbita pepo (Zucchini)cpecpeB280
Cp4.1LG05g13610Cucurbita pepo (Zucchini)cpecpeB495
Cp4.1LG05g13610Cucumber (Gy14) v1cgycpeB0210
Cp4.1LG05g13610Cucurbita maxima (Rimu)cmacpeB552
Cp4.1LG05g13610Bottle gourd (USVL1VR-Ls)cpelsiB607
Cp4.1LG05g13610Watermelon (Charleston Gray)cpewcgB652
Cp4.1LG05g13610Watermelon (97103) v1cpewmB743
Cp4.1LG05g13610Cucumber (Gy14) v2cgybcpeB978
Cp4.1LG05g13610Melon (DHL92) v3.6.1cpemedB814
Cp4.1LG05g13610Cucumber (Chinese Long) v3cpecucB0952