Cp4.1LG05g11330.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAATTAGTGTTTTGTGGGCTTTTGAATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGTCTCTGTTGCTTCATTTCTCCTCCATCTCTCCTACAAAGCATTAACCTTCTTTGCCTAGTTTTTCTCATTCTTTTCTTTGCCTTGGAATGTTTGCGACTCTTTTGAGTTGAAGCTGTTGGAATGAGAAATGATTGGGATATAATGTTATTTATATAATCAGAACTTTGTTAAAGCTAGAATAGAGTGTTCGTGTTTTGGTGATTCGTATGATTTTTATTCAAGATGCAAGAGATGTTGATTGATTAATTTGGTTTGGCCGTGAAGGCTGGGAGTTACTTGGAGTTCCATTTTTTTTGTTACTTGATGACAATGAACTTCAGCAGATTGGTTGCTACTCTGAATCTGAAGCCAATATATTCTCGGCGACTGACTATTTTTATTAGGGGTGTAATTAGCACAATTGAGATTACGGCTTATCAAGTGATACAATTATATACCTCTTTATCATTCGTAATCATTCAAATGCAGTGGCTAGAAACATTAGACACTGTAACTTTATGCCTGTAATTAAGCATGTCTAATCCACTTGGATGGATGTGCAGCAAGATGCGTCGTTAACAGCAGAAACGCTACACTTTGAATTGTAAACGTGTTTACTTTGCCTTTTTGGTGTAAATATGCATGTAGCCTATTTTATTGTCATTTCTTACAATAACGGATTGATTTCTTGCAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGGTAAGTAGTTTTAACTGTATTTTCTTATCTGAAGAAGTTAGAAGGCAGAAAAGGTGATATTTGATGCTCGTATATAGGATCCCTAATCTTGGATGTCTTTAACTAATATGAAACTAGTACTTATCATAGTGGTCTATTTCATTGAGCAAGAATTGTTACCTGTGTGAATGTTTCTTGACAACTCCCTTCAATGATTAGTTAAAAAATGTTGAGAATAGATAACATAGAGAATCAATAATATTTTGTGGGGTAGAAGTTTCTNTGAATGTTTCTTGACAACTCCCTTCAATGATTAGTTAAAAAAATGTTGTGAATAGATAACATAGAGAATCAATAATATTTTGTGGGGTAGAAGTTTATCATTAGTCATTACTCATTAGTGAAAGTGAATATAAGGAAGGAAGTTGTGTTTTCAATGTGAGCTAACACAGAAGACATCATCAAATATTTCCAGGATATATACTTCAAAGATTATGGTTATTGGTTTAGTTTGTAGCCCAAATGAAAGTTCTAAAACCACCCACTTCATTTATCTCATCTTTTTTTATGAGAAACTTGCATCTTTTTTCATGAGAAACCAAGTTTCATTCATAAGATCANATGAAAGTTCTAAAACCACCCACTTCATTTATCTCATCTTTTCTTATGAGAAACCAAGTTTCATTCATAAGATAAAAGAAAAACCACCTACGCTTTGCTCAACCTAACCCAAAGACTTACTTTTAGAGGCTGCTAGAGGAAAATTTAGACCATAAGTTTCTGGTAAAGTTTGTGGTTAGTTAGCCAGTGAGCACTAGATTCCCTGCTCTTTTGGTTTTCATTGTTCAAGGAGTTTACTGTAGGCAGTTGTTGGAATAGAAATGATGACGGAAAATCCGAATTATTATTAGGCAAAGCCGTAGACCAACCATATGCTTCAAGGATCATAGCCCAATATTGAGAAATATAGGAGCAGTGCCGAAAAAGATGTCCAGGATGTCAGAACTAGCAGAACATATAATGCACCCAGATGGACAAAGATGGATATGAGGCATATGTCTTTGAATTTGATTAACTGCGAAATTGCTCGAGACTAAGCTCACAAGGAAAGATCTTTATCTTCTTGGGATAGGAATCAGTCTAAATCACTTTTTAAAAACCACTTGACTCTTCGTCAAGGAACTCCCTCAAGATCTCTATAAGGGATTTAACTGTAAAAGTGTTGAATGGGTAAAAGGGCCTAAACCAAGAATTGTTACAATGCCAAAAACTGATGGAGGCGAAGAGATAAGAAAGATTGGCCTATTAATTGCTTTTAAATCATTTAGATTGCGTCATAGATCAAATCCCAAGCTTCCTGAGAGACATCCATGCTTCATCATCCATACACCTTGGCCAAGTAGGTAATGGAAAAAGTCGAGGGAAAACCATAGCAAGGACCCCACAACTGAACCAAGAATCATGCCAAAAGGAAGTAGAAAGACCATTATTACCCAAACATCTGTGTGCTCTAGTAGAAAGAAGATCAATCGCTGTACAAATAAAGCACCAAGGGGATTATTGAGAGCCTCCGAATAATCCTTTGCCAAAGATGAATGTCCTCTCAATGATAATATTTAGCCACAATGAATTTGCGCCAAAGAGCATTAACCTCATGCAAAAACCTCCGAACCCATTTTGCCAAGAGGGCTAAATTTTGATGACCAATACAACACAACAGTTTAGGAAGCTGTGTTGTAGCCCAGTTGATGTTGTGCATACCACCCTCTCCTCGCAACCCTCCCCAAAAGAAGTCAAGAAGTGTATCTAGAGTTCTTGGAACCTTCAATTGTAATTTAAATAGAGATAGAAAGTAAGTAGGCGTACTGAAGAGTGGCTTGGATAAGGGTGTGTTGACCACCTTTCGAAATATAAGTATATTTCCAACGACAAAGTTTATGTTGTATTCTCTCAATGACTAGCTACCAAAACTGCGCAGATTTTGAATNCGTGTGTTGACCACCTTTCGAAATATAAGTATATTTCCAACGACAAAGTTTATGTTGCATTCTCTCAATGACTAGCTACCAAAACTGCGCAGATTTTGAATTTCCTCGCACTGGAAGACCAAGATATGCAAAAGGAGAAACACTTTGCTTATAACCAATAGTTGTGAATTTCTAAGAGGATGAGAAGCAATTTGACCCAAGTTGGCACCATTTGCTACTATTCGGCCAAGACAATCTGACGCCAAAATGAAGAGGAATGGAGAAAGAGTATCATCAGCAAGTTGTAAATGATTCACACATAGCTGTGAGTGTTACCAGCAGGATGAGAAGCAATTCGACCCACGTTCGCACTATGTGCTCATATAAGATAATCTAATACCATAATGGAGAGGAAAGGAGAAAGAGGATCACTGTGGCGAATACCTCAAGAGGGGATGATGATACCTTTTGGTTGTCTATGAATGATAATTGAATAATTAACACTAAGATGCATCCACGAATTCACTTCCTCCAGATTCAACCAAAATCTTTGGCATGAAGAATTGCATCTATAAAATTAGTCAACTTTATCAAAAGCCTTTTCTAAATCCAGTTTAAGCACCACCCTCCTTACGGGAGATAAAGCTAATCATCAACCAACTCATCTGCAATTATGGAGGTACATTAAATTTTTCTGCATTAGTTGAAGGCAAAACACTTTCCAATCTATTTGACAGAACTCATTCTATAATTTTGTATGCACAAGGAATGAGGCTGATAGGGGGGAGTTTGTGACTGATTTGGAGTCCAATTTTTTTTTTGGTATAAGGCAGCTATGGTATAGGTATCATTCATATAGATATCATTCAGAGTCACATTAACAATGCTTGAAGTATAGAAATCCCCAATTATAGTCATAACATCCATCATGTTTAACAGTATTCGAAAAAGCTTTAAAGAATTTATCAGTAAAGCCATATGGGCCTGGGGACATGCTCAAGCCTATTGAAATCATAGTCTGATGCACCTCGCCTTCGGGAAACAAACAGCCTCCAAACCACTTGAATGAGCTTCACTTATTGCATCAATCCACATTGGTTGGTAGGAATTGAATGTCATTATCTTTGGTGAATGAAGTTTGATAAAAATAAGTGAACTCTACCTCAGTTGCACAATACGTAAGTGTAACGACCCTACTTTTCCATTAAAAAATAAGGTCGTTCCTACATGCATTAGGTAATGGCTTGGAAACTTTAGTCAAACATTGGTTTGGAATGAAGAAAAACACGTTGGATCACTTTGTCTTCTACTGACGAACTAAGAGGGGCATTATTCTGCTTGTCTTATATGTTAATGATATTGTTATTACTAGAAATGATACATCTGACATTTTATCTCTCAAAACTTTTCTCCAGTCAGTTTCATACTAATGACTTGGTAACATTGAATACTTCTTAGGTATTGAAGTAATGAGAAACTATAAAGATATTTTTGTGTCACAAAGGGAATATGTGCTTGTTTTGCTATCTGAGACTGGGGAAATGGGGAGTCGAGTGATATATTACTCCAATGATGCCTGATCTATAACTTACAAAAGATGGATAACCATTTAAGATCTTTAGAGACATCAAAGATTGGTTGAAAAAGTTGAATTATCTTACTGTGACATGACCAAACATAGTTTATTCGGTAAGCATTATGAGTTAGTTTATGTTTTCACCTACAATGGATCGTTGGGTTTCATTTCAACAAATTCTAGAATATTTGAAGGTTGCACCTAGACGTGGGATCTTATATAAAGATCATGATCATATGAAGATTGAGTGTGTTTCAGATGCCAATTGGGTAGGATCAAGAGAAGGTAGAAGAGCAACTTATGAATATTGGAGGCAATTTGTTTCTTGACCTAGTTGTAGTATCATAACCAAGCTATCTTTCATATTGCATTCAACCTAGTATTTCATGAGTAAACTAAACATATTGAAATTGATTGTCATTTTGTTTGTGAGAACTATAACAAGGTTGGTGTCTATGTAACAAATTGGACATGATTAGCATGTATGTTCTAGATTGAGGGGAGTATTATATGTGAACTTAGGAGCCTAATAGTATTTTGTCATTTATTGTAATTTTACTATGGTTAGTTTAGGCTCCAGGTTTGTCTATATATAGTTGGCCCTACCGTATAGAATGTAATGATATTCTTCCATATTTGGTCTCATAGTAAGCATACCTACTTTTGTATCTGAACAAAATATGTTTTTAAAAATCGAATGGACGAACTATCTTATCACTGTATAATGGAACATGTAAATAGATAAAAAGCCTACATTTGCAGCCGGCACTGTCTTATGCATGCTCTATCGAAAAGTCATGCATTTTGATTAGGAAAATTTCGTAAGGATCGTAAGAATGTTACATTTACTCTATTCTAAACAGAACACCAAGTATTACAAGCATGTATTTCTGAACGAGATTCTATGTTCATATTTTTTATGCTATGAATTCCAAATGAATTTCTCTGATTGTTATATCTATAATGCCTTCAGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGGTTATCATCACATTGAACCAAACTCTCTTGTTTGTGATTTATCTATCTACATTTGGTTAATAGTATTTTTCTCTTTTCCTATGACCATAAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGATGTATGGGGGTTCAGATGGCAAATTATTCTGGAGATGATGTTTTATATGAATGCATCAGCTCATGTTCAGTTCAGAGAATTAAGGTTTGTTTTCTTGCCCATAAAATTACCTTAAAAATTTTGAACCTCTTCCTCTTGCATATGATTTTCTAATCATTTTTCGTCTATTGCATGCTCCATTTTGGCTTAAAATTATTTTCCATCGGTACCAATGTTTTGCAACTGATCTGTAATGAAAGGTTTATTTGATCTGAAAGGCTTACAAATTTTGTAAGATTGAGATTACTACTTTCGAATTTTGTTTCCTTACTGATCTGCCATGAAATTAGAATTCTCTCATTGATTTTTTACTTCATTATTCCATTTGTTATATGCACTCATTGATCAATGAAAGTCCAAAACAATTAGGTAGTATTCTATATAACATAATCATCTGTATTTCTTCATTTGTTTGTTAGTTTAGTTTGTAATTAACGATATTTATATTATTTGAAGGACTTGAACTACTACATTCTTTAGGGTTATATGAGTTTTGTTCATACGTTCTGTTAGTTGCACAATATTATTTATTTTGGATGTATTTGCATTAGTTTTTTTTTTCTTTCTTTCTAATACATGATATTGGAATAACATTATTTTTTTTAGTATTTATTCACTTGTGATATTCGAATATGATATTCGAATGTCATGTTTGTATTTTGCAATTTCAATTTTAATTTCGACTTTATAAACTTAACAAAATAAATGCTTATGAATTAGTATTGAATAAGAACAAATTTTTAGAAATATTTATAAACGGCTTGGTATTTAAATTTTTGTTAAAAATGGCTTATAGATATTT TAAAATTAGTGTTTTGTGGGCTTTTGAATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGATGTATGGGGGTTCAGATGGCAAATTATTCTGGAGATGATGTTTTATATGAATGCATCAGCTCATGTTCAGTTCAGAGAATTAAGGTTTGTTTTCTTGCCCATAAAATTACCTTAAAAATTTTGAACCTCTTCCTCTTGCATATGATTTTCTAATCATTTTTCGTCTATTGCATGCTCCATTTTGGCTTAAAATTATTTTCCATCGGTACCAATGTTTTGCAACTGATCTGTAATGAAAGGTTTATTTGATCTGAAAGGCTTACAAATTTTGTAAGATTGAGATTACTACTTTCGAATTTTGTTTCCTTACTGATCTGCCATGAAATTAGAATTCTCTCATTGATTTTTTACTTCATTATTCCATTTGTTATATGCACTCATTGATCAATGAAAGTCCAAAACAATTAGGTAGTATTCTATATAACATAATCATCTGTATTTCTTCATTTGTTTGTTAGTTTAGTTTGTAATTAACGATATTTATATTATTTGAAGGACTTGAACTACTACATTCTTTAGGGTTATATGAGTTTTGTTCATACGTTCTGTTAGTTGCACAATATTATTTATTTTGGATGTATTTGCATTAGTTTTTTTTTTCTTTCTTTCTAATACATGATATTGGAATAACATTATTTTTTTTAGTATTTATTCACTTGTGATATTCGAATATGATATTCGAATGTCATGTTTGTATTTTGCAATTTCAATTTTAATTTCGACTTTATAAACTTAACAAAATAAATGCTTATGAATTAGTATTGAATAAGAACAAATTTTTAGAAATATTTATAAACGGCTTGGTATTTAAATTTTTGTTAAAAATGGCTTATAGATATTT ATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGA MQSRISVTCPGLRNGMGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR
BLAST of Cp4.1LG05g11330.1 vs. TrEMBL
Match: A0A0A0LMM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285320 PE=4 SV=1) HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85 Identity = 173/222 (77.93%), Postives = 200/222 (90.09%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. TrEMBL
Match: A0A151RXU2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030986 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.7e-52 Identity = 122/219 (55.71%), Postives = 158/219 (72.15%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. TrEMBL
Match: F6HST2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00130 PE=4 SV=1) HSP 1 Score: 212.2 bits (539), Expect = 6.7e-52 Identity = 124/214 (57.94%), Postives = 165/214 (77.10%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. TrEMBL
Match: D7TT61_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00050 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51 Identity = 123/214 (57.48%), Postives = 164/214 (76.64%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. TrEMBL
Match: A0A0L9TPL2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g197200 PE=4 SV=1) HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50 Identity = 117/209 (55.98%), Postives = 152/209 (72.73%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. TAIR10
Match: AT3G49890.1 (AT3G49890.1 unknown protein) HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42 Identity = 103/212 (48.58%), Postives = 142/212 (66.98%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. NCBI nr
Match: gi|659115997|ref|XP_008457847.1| (PREDICTED: uncharacterized protein LOC103497429 [Cucumis melo]) HSP 1 Score: 328.9 bits (842), Expect = 7.1e-87 Identity = 177/221 (80.09%), Postives = 199/221 (90.05%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. NCBI nr
Match: gi|449460586|ref|XP_004148026.1| (PREDICTED: uncharacterized protein LOC101203340 [Cucumis sativus]) HSP 1 Score: 323.9 bits (829), Expect = 2.3e-85 Identity = 173/222 (77.93%), Postives = 200/222 (90.09%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. NCBI nr
Match: gi|747102420|ref|XP_011099375.1| (PREDICTED: uncharacterized protein LOC105177819 isoform X1 [Sesamum indicum]) HSP 1 Score: 219.5 bits (558), Expect = 6.0e-54 Identity = 121/215 (56.28%), Postives = 162/215 (75.35%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. NCBI nr
Match: gi|1012336061|gb|KYP47372.1| (hypothetical protein KK1_030986 [Cajanus cajan]) HSP 1 Score: 212.2 bits (539), Expect = 9.6e-52 Identity = 122/219 (55.71%), Postives = 158/219 (72.15%), Query Frame = 1
BLAST of Cp4.1LG05g11330.1 vs. NCBI nr
Match: gi|359480621|ref|XP_003632503.1| (PREDICTED: uncharacterized protein LOC100854286 [Vitis vinifera]) HSP 1 Score: 212.2 bits (539), Expect = 9.6e-52 Identity = 124/214 (57.94%), Postives = 165/214 (77.10%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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