Cp4.1LG05g11330 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g11330
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRibose-5-phosphate isomerase A
LocationCp4.1LG05 : 7764187 .. 7771027 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAATTAGTGTTTTGTGGGCTTTTGAATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGTCTCTGTTGCTTCATTTCTCCTCCATCTCTCCTACAAAGCATTAACCTTCTTTGCCTAGTTTTTCTCATTCTTTTCTTTGCCTTGGAATGTTTGCGACTCTTTTGAGTTGAAGCTGTTGGAATGAGAAATGATTGGGATATAATGTTATTTATATAATCAGAACTTTGTTAAAGCTAGAATAGAGTGTTCGTGTTTTGGTGATTCGTATGATTTTTATTCAAGATGCAAGAGATGTTGATTGATTAATTTGGTTTGGCCGTGAAGGCTGGGAGTTACTTGGAGTTCCATTTTTTTTGTTACTTGATGACAATGAACTTCAGCAGATTGGTTGCTACTCTGAATCTGAAGCCAATATATTCTCGGCGACTGACTATTTTTATTAGGGGTGTAATTAGCACAATTGAGATTACGGCTTATCAAGTGATACAATTATATACCTCTTTATCATTCGTAATCATTCAAATGCAGTGGCTAGAAACATTAGACACTGTAACTTTATGCCTGTAATTAAGCATGTCTAATCCACTTGGATGGATGTGCAGCAAGATGCGTCGTTAACAGCAGAAACGCTACACTTTGAATTGTAAACGTGTTTACTTTGCCTTTTTGGTGTAAATATGCATGTAGCCTATTTTATTGTCATTTCTTACAATAACGGATTGATTTCTTGCAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGGTAAGTAGTTTTAACTGTATTTTCTTATCTGAAGAAGTTAGAAGGCAGAAAAGGTGATATTTGATGCTCGTATATAGGATCCCTAATCTTGGATGTCTTTAACTAATATGAAACTAGTACTTATCATAGTGGTCTATTTCATTGAGCAAGAATTGTTACCTGTGTGAATGTTTCTTGACAACTCCCTTCAATGATTAGTTAAAAAATGTTGAGAATAGATAACATAGAGAATCAATAATATTTTGTGGGGTAGAAGTTTCTNTGAATGTTTCTTGACAACTCCCTTCAATGATTAGTTAAAAAAATGTTGTGAATAGATAACATAGAGAATCAATAATATTTTGTGGGGTAGAAGTTTATCATTAGTCATTACTCATTAGTGAAAGTGAATATAAGGAAGGAAGTTGTGTTTTCAATGTGAGCTAACACAGAAGACATCATCAAATATTTCCAGGATATATACTTCAAAGATTATGGTTATTGGTTTAGTTTGTAGCCCAAATGAAAGTTCTAAAACCACCCACTTCATTTATCTCATCTTTTTTTATGAGAAACTTGCATCTTTTTTCATGAGAAACCAAGTTTCATTCATAAGATCANATGAAAGTTCTAAAACCACCCACTTCATTTATCTCATCTTTTCTTATGAGAAACCAAGTTTCATTCATAAGATAAAAGAAAAACCACCTACGCTTTGCTCAACCTAACCCAAAGACTTACTTTTAGAGGCTGCTAGAGGAAAATTTAGACCATAAGTTTCTGGTAAAGTTTGTGGTTAGTTAGCCAGTGAGCACTAGATTCCCTGCTCTTTTGGTTTTCATTGTTCAAGGAGTTTACTGTAGGCAGTTGTTGGAATAGAAATGATGACGGAAAATCCGAATTATTATTAGGCAAAGCCGTAGACCAACCATATGCTTCAAGGATCATAGCCCAATATTGAGAAATATAGGAGCAGTGCCGAAAAAGATGTCCAGGATGTCAGAACTAGCAGAACATATAATGCACCCAGATGGACAAAGATGGATATGAGGCATATGTCTTTGAATTTGATTAACTGCGAAATTGCTCGAGACTAAGCTCACAAGGAAAGATCTTTATCTTCTTGGGATAGGAATCAGTCTAAATCACTTTTTAAAAACCACTTGACTCTTCGTCAAGGAACTCCCTCAAGATCTCTATAAGGGATTTAACTGTAAAAGTGTTGAATGGGTAAAAGGGCCTAAACCAAGAATTGTTACAATGCCAAAAACTGATGGAGGCGAAGAGATAAGAAAGATTGGCCTATTAATTGCTTTTAAATCATTTAGATTGCGTCATAGATCAAATCCCAAGCTTCCTGAGAGACATCCATGCTTCATCATCCATACACCTTGGCCAAGTAGGTAATGGAAAAAGTCGAGGGAAAACCATAGCAAGGACCCCACAACTGAACCAAGAATCATGCCAAAAGGAAGTAGAAAGACCATTATTACCCAAACATCTGTGTGCTCTAGTAGAAAGAAGATCAATCGCTGTACAAATAAAGCACCAAGGGGATTATTGAGAGCCTCCGAATAATCCTTTGCCAAAGATGAATGTCCTCTCAATGATAATATTTAGCCACAATGAATTTGCGCCAAAGAGCATTAACCTCATGCAAAAACCTCCGAACCCATTTTGCCAAGAGGGCTAAATTTTGATGACCAATACAACACAACAGTTTAGGAAGCTGTGTTGTAGCCCAGTTGATGTTGTGCATACCACCCTCTCCTCGCAACCCTCCCCAAAAGAAGTCAAGAAGTGTATCTAGAGTTCTTGGAACCTTCAATTGTAATTTAAATAGAGATAGAAAGTAAGTAGGCGTACTGAAGAGTGGCTTGGATAAGGGTGTGTTGACCACCTTTCGAAATATAAGTATATTTCCAACGACAAAGTTTATGTTGTATTCTCTCAATGACTAGCTACCAAAACTGCGCAGATTTTGAATNCGTGTGTTGACCACCTTTCGAAATATAAGTATATTTCCAACGACAAAGTTTATGTTGCATTCTCTCAATGACTAGCTACCAAAACTGCGCAGATTTTGAATTTCCTCGCACTGGAAGACCAAGATATGCAAAAGGAGAAACACTTTGCTTATAACCAATAGTTGTGAATTTCTAAGAGGATGAGAAGCAATTTGACCCAAGTTGGCACCATTTGCTACTATTCGGCCAAGACAATCTGACGCCAAAATGAAGAGGAATGGAGAAAGAGTATCATCAGCAAGTTGTAAATGATTCACACATAGCTGTGAGTGTTACCAGCAGGATGAGAAGCAATTCGACCCACGTTCGCACTATGTGCTCATATAAGATAATCTAATACCATAATGGAGAGGAAAGGAGAAAGAGGATCACTGTGGCGAATACCTCAAGAGGGGATGATGATACCTTTTGGTTGTCTATGAATGATAATTGAATAATTAACACTAAGATGCATCCACGAATTCACTTCCTCCAGATTCAACCAAAATCTTTGGCATGAAGAATTGCATCTATAAAATTAGTCAACTTTATCAAAAGCCTTTTCTAAATCCAGTTTAAGCACCACCCTCCTTACGGGAGATAAAGCTAATCATCAACCAACTCATCTGCAATTATGGAGGTACATTAAATTTTTCTGCATTAGTTGAAGGCAAAACACTTTCCAATCTATTTGACAGAACTCATTCTATAATTTTGTATGCACAAGGAATGAGGCTGATAGGGGGGAGTTTGTGACTGATTTGGAGTCCAATTTTTTTTTTGGTATAAGGCAGCTATGGTATAGGTATCATTCATATAGATATCATTCAGAGTCACATTAACAATGCTTGAAGTATAGAAATCCCCAATTATAGTCATAACATCCATCATGTTTAACAGTATTCGAAAAAGCTTTAAAGAATTTATCAGTAAAGCCATATGGGCCTGGGGACATGCTCAAGCCTATTGAAATCATAGTCTGATGCACCTCGCCTTCGGGAAACAAACAGCCTCCAAACCACTTGAATGAGCTTCACTTATTGCATCAATCCACATTGGTTGGTAGGAATTGAATGTCATTATCTTTGGTGAATGAAGTTTGATAAAAATAAGTGAACTCTACCTCAGTTGCACAATACGTAAGTGTAACGACCCTACTTTTCCATTAAAAAATAAGGTCGTTCCTACATGCATTAGGTAATGGCTTGGAAACTTTAGTCAAACATTGGTTTGGAATGAAGAAAAACACGTTGGATCACTTTGTCTTCTACTGACGAACTAAGAGGGGCATTATTCTGCTTGTCTTATATGTTAATGATATTGTTATTACTAGAAATGATACATCTGACATTTTATCTCTCAAAACTTTTCTCCAGTCAGTTTCATACTAATGACTTGGTAACATTGAATACTTCTTAGGTATTGAAGTAATGAGAAACTATAAAGATATTTTTGTGTCACAAAGGGAATATGTGCTTGTTTTGCTATCTGAGACTGGGGAAATGGGGAGTCGAGTGATATATTACTCCAATGATGCCTGATCTATAACTTACAAAAGATGGATAACCATTTAAGATCTTTAGAGACATCAAAGATTGGTTGAAAAAGTTGAATTATCTTACTGTGACATGACCAAACATAGTTTATTCGGTAAGCATTATGAGTTAGTTTATGTTTTCACCTACAATGGATCGTTGGGTTTCATTTCAACAAATTCTAGAATATTTGAAGGTTGCACCTAGACGTGGGATCTTATATAAAGATCATGATCATATGAAGATTGAGTGTGTTTCAGATGCCAATTGGGTAGGATCAAGAGAAGGTAGAAGAGCAACTTATGAATATTGGAGGCAATTTGTTTCTTGACCTAGTTGTAGTATCATAACCAAGCTATCTTTCATATTGCATTCAACCTAGTATTTCATGAGTAAACTAAACATATTGAAATTGATTGTCATTTTGTTTGTGAGAACTATAACAAGGTTGGTGTCTATGTAACAAATTGGACATGATTAGCATGTATGTTCTAGATTGAGGGGAGTATTATATGTGAACTTAGGAGCCTAATAGTATTTTGTCATTTATTGTAATTTTACTATGGTTAGTTTAGGCTCCAGGTTTGTCTATATATAGTTGGCCCTACCGTATAGAATGTAATGATATTCTTCCATATTTGGTCTCATAGTAAGCATACCTACTTTTGTATCTGAACAAAATATGTTTTTAAAAATCGAATGGACGAACTATCTTATCACTGTATAATGGAACATGTAAATAGATAAAAAGCCTACATTTGCAGCCGGCACTGTCTTATGCATGCTCTATCGAAAAGTCATGCATTTTGATTAGGAAAATTTCGTAAGGATCGTAAGAATGTTACATTTACTCTATTCTAAACAGAACACCAAGTATTACAAGCATGTATTTCTGAACGAGATTCTATGTTCATATTTTTTATGCTATGAATTCCAAATGAATTTCTCTGATTGTTATATCTATAATGCCTTCAGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGGTTATCATCACATTGAACCAAACTCTCTTGTTTGTGATTTATCTATCTACATTTGGTTAATAGTATTTTTCTCTTTTCCTATGACCATAAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGATGTATGGGGGTTCAGATGGCAAATTATTCTGGAGATGATGTTTTATATGAATGCATCAGCTCATGTTCAGTTCAGAGAATTAAGGTTTGTTTTCTTGCCCATAAAATTACCTTAAAAATTTTGAACCTCTTCCTCTTGCATATGATTTTCTAATCATTTTTCGTCTATTGCATGCTCCATTTTGGCTTAAAATTATTTTCCATCGGTACCAATGTTTTGCAACTGATCTGTAATGAAAGGTTTATTTGATCTGAAAGGCTTACAAATTTTGTAAGATTGAGATTACTACTTTCGAATTTTGTTTCCTTACTGATCTGCCATGAAATTAGAATTCTCTCATTGATTTTTTACTTCATTATTCCATTTGTTATATGCACTCATTGATCAATGAAAGTCCAAAACAATTAGGTAGTATTCTATATAACATAATCATCTGTATTTCTTCATTTGTTTGTTAGTTTAGTTTGTAATTAACGATATTTATATTATTTGAAGGACTTGAACTACTACATTCTTTAGGGTTATATGAGTTTTGTTCATACGTTCTGTTAGTTGCACAATATTATTTATTTTGGATGTATTTGCATTAGTTTTTTTTTTCTTTCTTTCTAATACATGATATTGGAATAACATTATTTTTTTTAGTATTTATTCACTTGTGATATTCGAATATGATATTCGAATGTCATGTTTGTATTTTGCAATTTCAATTTTAATTTCGACTTTATAAACTTAACAAAATAAATGCTTATGAATTAGTATTGAATAAGAACAAATTTTTAGAAATATTTATAAACGGCTTGGTATTTAAATTTTTGTTAAAAATGGCTTATAGATATTT

mRNA sequence

TAAAATTAGTGTTTTGTGGGCTTTTGAATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGATGTATGGGGGTTCAGATGGCAAATTATTCTGGAGATGATGTTTTATATGAATGCATCAGCTCATGTTCAGTTCAGAGAATTAAGGTTTGTTTTCTTGCCCATAAAATTACCTTAAAAATTTTGAACCTCTTCCTCTTGCATATGATTTTCTAATCATTTTTCGTCTATTGCATGCTCCATTTTGGCTTAAAATTATTTTCCATCGGTACCAATGTTTTGCAACTGATCTGTAATGAAAGGTTTATTTGATCTGAAAGGCTTACAAATTTTGTAAGATTGAGATTACTACTTTCGAATTTTGTTTCCTTACTGATCTGCCATGAAATTAGAATTCTCTCATTGATTTTTTACTTCATTATTCCATTTGTTATATGCACTCATTGATCAATGAAAGTCCAAAACAATTAGGTAGTATTCTATATAACATAATCATCTGTATTTCTTCATTTGTTTGTTAGTTTAGTTTGTAATTAACGATATTTATATTATTTGAAGGACTTGAACTACTACATTCTTTAGGGTTATATGAGTTTTGTTCATACGTTCTGTTAGTTGCACAATATTATTTATTTTGGATGTATTTGCATTAGTTTTTTTTTTCTTTCTTTCTAATACATGATATTGGAATAACATTATTTTTTTTAGTATTTATTCACTTGTGATATTCGAATATGATATTCGAATGTCATGTTTGTATTTTGCAATTTCAATTTTAATTTCGACTTTATAAACTTAACAAAATAAATGCTTATGAATTAGTATTGAATAAGAACAAATTTTTAGAAATATTTATAAACGGCTTGGTATTTAAATTTTTGTTAAAAATGGCTTATAGATATTT

Coding sequence (CDS)

ATGCAAAGCCGGATATCTGTTACGTGTCCAGGCTTGAGAAACGGAATGGGCGATCAGAGAAACGGCGGCTATGGTGGCGACAGCAGCAGCGGTGAGGAGGACGGTGACGCCCAATGGAGAGCCGCCATCGACTCTGTCACTACCACGTCTGTGTTTCTCTCGTCGTTAACTAATGGTCTTCCTGCTACTTCTACAACCACTGCTTCAAACTCGGACGATGACTCCGAGCTTAATCTCGGTCCTCAACCGCCCAAGCAATATCAAATCAAGGCACAGAAGATGTTGGAGAATATTTTGGAAACTACTCTGGAGGTGGTAGAACATTCCACAGCTATTCCTTGTGATGATTCCAAAACCAGTGAAGGTGGAATTCGCTTGTTTAAAAATGCTCCCGTTGGAGTTGTGTTTGATCACATCGATGAGCTTCAACGCCCCACAAAGAAACCAAAAATTCTTCCAGGGAAGGAAATCAACGAGAAATCAAAGAAGTTCAAACAGCGTATCCAATCCATGGCCATTGAAGGAAAAGATATAATCGCTGCTGGAAACCGTGCGCGCGAGAAGTCAATTGCTAGGCTTGAAGCGAAGGAAGCCGCAGCCAAAGCAGCTGCTAAAGGAGAGGAAGAAAGGGTAGCAGAACTGAAAAAGGTAAGAGGAGAGAAATGGTTGCCATCAATTGCTAGGGAAATGAAGTTACAAGCTCAACGTTGA

Protein sequence

MQSRISVTCPGLRNGMGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR
Homology
[Close]
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match: A0A0A0LMM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285320 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.6e-85
Identity = 173/222 (77.93%), Postives = 200/222 (90.09%), Query Frame = 1 

Query: 16  MGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDS 75
           MGD+R+  +GGDSSSGEEDGDAQWR+AIDSV  +SVF+SSLTNG+PATS  T S+SD+  
Sbjct: 1   MGDRRSHQHGGDSSSGEEDGDAQWRSAIDSVAISSVFISSLTNGVPATSIATTSSSDNGF 60

Query: 76  ELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCD-DSKTSEGGIRLFKNAPVGV 135
           E NL  QPPKQYQIKAQK+L+NILETTLE+VEHS ++PCD DSK+SEGGIRLFKNAPVGV
Sbjct: 61  EFNLCAQPPKQYQIKAQKLLDNILETTLELVEHSNSVPCDDDSKSSEGGIRLFKNAPVGV 120

Query: 136 VFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLE 195
           VFDH+DEL RPTK+PKILPGKEINEKSKKFKQ+++S+A+EG+DII A  R  EKSIARLE
Sbjct: 121 VFDHVDELPRPTKRPKILPGKEINEKSKKFKQQLRSVAVEGEDIITASKRVCEKSIARLE 180

Query: 196 AKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           AKEAA KAAAK EE+RVA+LKKVRGEKWLPSIAREMKLQ+Q+
Sbjct: 181 AKEAAVKAAAKREEDRVAKLKKVRGEKWLPSIAREMKLQSQQ 222

[Close]
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match: A0A151RXU2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_030986 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.7e-52
Identity = 122/219 (55.71%), Postives = 158/219 (72.15%), Query Frame = 1 

Query: 15  GMGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDD 74
           G G+  NG     SSSGEEDGDA WRAAIDS+  T+ ++SS      + +  T  N   D
Sbjct: 2   GEGEPTNGYC---SSSGEEDGDASWRAAIDSIAQTTTYVSS------SITKRTHPNDHHD 61

Query: 75  SELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGV 134
            + NL  Q  K YQ+KAQK+L  ILE T+E+V     +  +D K  E GIRLFKNA  G+
Sbjct: 62  HDNNLKTQRIKHYQLKAQKLLNEILENTIEIVRKPVPVVDEDPKIEECGIRLFKNAQPGI 121

Query: 135 VFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLE 194
           VFDH+DE Q P K+P+ILPG +I EKSKKF++RI+S+A++G D+IAA N A +KS+ARLE
Sbjct: 122 VFDHVDEPQPPRKRPRILPGGDIEEKSKKFRKRIRSVAVDGIDVIAAANNAYKKSLARLE 181

Query: 195 AKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQ 234
           AK+AAAKA AK EEERVA LKK+RGE+WLPS+A+EM+++
Sbjct: 182 AKDAAAKAKAKREEERVANLKKIRGERWLPSMAKEMQVK 211

[Close]
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match: F6HST2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00130 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 6.7e-52
Identity = 124/214 (57.94%), Postives = 165/214 (77.10%), Query Frame = 1 

Query: 23  GYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQ 82
           G G  SSSGEEDGDA W+AAIDSV  ++V  ++ +NG  A S  +A  S D +  N   Q
Sbjct: 5   GSGSCSSSGEEDGDADWKAAIDSV--SAVATTATSNGFAAASKDSAV-STDGTNSNQKSQ 64

Query: 83  PPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDEL 142
             K YQIKAQK+L++I+E TL +VE    I  D+ KT+EGGIRLFK+AP G+VFDH++++
Sbjct: 65  NLKHYQIKAQKLLDDIIENTLVMVEDLIHI-SDNEKTNEGGIRLFKHAPPGIVFDHMEKI 124

Query: 143 QRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKA 202
           Q+P K+P+ILPG EI+EKSKKF+ +++S+A++G DI+AA   A +KS+ARLEAK+AAAKA
Sbjct: 125 QQPRKRPRILPGNEIDEKSKKFRGQLRSVAVDGVDIMAAARDACQKSVARLEAKDAAAKA 184

Query: 203 AAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           AAK EEERVAELK+ RGE+WLPSIARE +++  R
Sbjct: 185 AAKREEERVAELKRTRGERWLPSIARERQIKLGR 214

[Close]
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match: D7TT61_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00050 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 2.5e-51
Identity = 123/214 (57.48%), Postives = 164/214 (76.64%), Query Frame = 1 

Query: 23  GYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQ 82
           G G  SSSGEEDGDA W+AAIDSV+  +   ++ ++G  A S  +A  S D +  N   Q
Sbjct: 5   GSGSCSSSGEEDGDADWKAAIDSVSAVAT-TTATSSGFAAASKDSAV-STDGTNSNQKSQ 64

Query: 83  PPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDEL 142
             K YQIKAQK+L++I+E TL +VE    I  D+ KT+EGGIRLFK+AP G+VFDH+D++
Sbjct: 65  NLKHYQIKAQKLLDDIIENTLVMVEDLIHI-SDNEKTNEGGIRLFKHAPPGIVFDHMDKI 124

Query: 143 QRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKA 202
           Q+P K+P+ILPG EI+EKSKKF+ +++S+A++G DI+AA   A +KS+ARLEAK+AAAKA
Sbjct: 125 QQPRKRPRILPGNEIDEKSKKFRGQLRSVAVDGVDIMAAARDACQKSVARLEAKDAAAKA 184

Query: 203 AAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           AAK EEERVAELK+ RGE+WLPSIARE +++  R
Sbjct: 185 AAKREEERVAELKRTRGERWLPSIARERQIKLGR 215

[Close]
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match: A0A0L9TPL2_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g197200 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.7e-50
Identity = 117/209 (55.98%), Postives = 152/209 (72.73%), Query Frame = 1 

Query: 28  SSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQPPKQY 87
           SSSGEEDGDA WRAAI S+  T+ ++SS T   P        N DDD       Q  K Y
Sbjct: 12  SSSGEEDGDAAWRAAIHSIAQTTTYVSSTTKHGPP-------NDDDDDYSKPKTQQLKHY 71

Query: 88  QIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDELQRPTK 147
           Q+KAQK+L +ILE T+E+V     +  DD K +E GIRLFK A  G+VFDH+DE Q   K
Sbjct: 72  QLKAQKLLNDILENTIEIVRKPVPVEDDDPKINECGIRLFKYAKPGIVFDHLDEPQPLRK 131

Query: 148 KPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKAAAKGE 207
           +P+ILPG++I+EKSKKF++RI+S+A+ G DI+AA N + +KS+ARLEAK+AAAKA AK E
Sbjct: 132 RPRILPGEDIDEKSKKFRKRIRSVAVNGIDILAAANDSCKKSLARLEAKDAAAKAKAKRE 191

Query: 208 EERVAELKKVRGEKWLPSIAREMKLQAQR 237
           EERV  LKK+RGE+WLPS+A+EM+++ QR
Sbjct: 192 EERVENLKKIRGERWLPSMAKEMQVKTQR 213

[Close]
BLAST of Cp4.1LG05g11330 vs. TAIR10
Match: AT3G49890.1 (AT3G49890.1 unknown protein)

HSP 1 Score: 170.2 bits (430), Expect = 1.5e-42
Identity = 103/212 (48.58%), Postives = 142/212 (66.98%), Query Frame = 1 

Query: 25  GGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQPP 84
           GGDSSS  ED D +WRAAI+S+ TT+V+ +S T   PA     A+ S +  +  L P+  
Sbjct: 8   GGDSSS--EDEDPKWRAAINSIATTTVYGASATK--PA-----ATQSHNYGDFRLKPKKL 67

Query: 85  KQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDELQR 144
              QIK + +L  ++E TL+ VE    IP +D   ++ G+RLFK    G+VFDH+DE++ 
Sbjct: 68  THGQIKVKNLLNEMVEKTLDFVEDPVNIP-EDKPENDCGVRLFKRCATGIVFDHVDEIRG 127

Query: 145 PTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKAAA 204
           P KKP + P K +   SK+FK+R++S+A++G DI+ A   A +K+ ARL+AKE AAK  A
Sbjct: 128 PKKKPNLRPDKGVEGSSKEFKKRVKSIAVDGSDILTAAVEAAKKASARLDAKEVAAKDKA 187

Query: 205 KGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           K EEER+AELKKVRGEKWLPSI R MK + +R
Sbjct: 188 KKEEERIAELKKVRGEKWLPSIERAMKKEMKR 209

[Close]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match: gi|659115997|ref|XP_008457847.1| (PREDICTED: uncharacterized protein LOC103497429 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 7.1e-87
Identity = 177/221 (80.09%), Postives = 199/221 (90.05%), Query Frame = 1 

Query: 16  MGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDS 75
           MGD+R+  +GGDSSSGEEDGDA+WRAAIDSVT +SVF+SSLTNG+PATS  T S  DDD 
Sbjct: 1   MGDRRSHHHGGDSSSGEEDGDAKWRAAIDSVTVSSVFISSLTNGVPATSINTTSKFDDDF 60

Query: 76  ELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPC-DDSKTSEGGIRLFKNAPVGV 135
           ELNL  QPPK YQIKAQK+L+NILETTLE+VEHS ++PC DDSK+SEGGIRLFKNAPVGV
Sbjct: 61  ELNLRAQPPKPYQIKAQKLLDNILETTLELVEHSNSVPCHDDSKSSEGGIRLFKNAPVGV 120

Query: 136 VFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLE 195
           VFDH+DEL RPTKKPKILPGKEINEKSKKFKQ+++S+A+EG+DII A  R  EKSIARLE
Sbjct: 121 VFDHVDELPRPTKKPKILPGKEINEKSKKFKQQLRSVAVEGEDIITAAKRVCEKSIARLE 180

Query: 196 AKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQ 236
           AKEAA KAAAK EEERVA+LKKVRGEKWLPSIAREMKLQ+Q
Sbjct: 181 AKEAAMKAAAKREEERVAKLKKVRGEKWLPSIAREMKLQSQ 221

[Close]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match: gi|449460586|ref|XP_004148026.1| (PREDICTED: uncharacterized protein LOC101203340 [Cucumis sativus])

HSP 1 Score: 323.9 bits (829), Expect = 2.3e-85
Identity = 173/222 (77.93%), Postives = 200/222 (90.09%), Query Frame = 1 

Query: 16  MGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDS 75
           MGD+R+  +GGDSSSGEEDGDAQWR+AIDSV  +SVF+SSLTNG+PATS  T S+SD+  
Sbjct: 1   MGDRRSHQHGGDSSSGEEDGDAQWRSAIDSVAISSVFISSLTNGVPATSIATTSSSDNGF 60

Query: 76  ELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCD-DSKTSEGGIRLFKNAPVGV 135
           E NL  QPPKQYQIKAQK+L+NILETTLE+VEHS ++PCD DSK+SEGGIRLFKNAPVGV
Sbjct: 61  EFNLCAQPPKQYQIKAQKLLDNILETTLELVEHSNSVPCDDDSKSSEGGIRLFKNAPVGV 120

Query: 136 VFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLE 195
           VFDH+DEL RPTK+PKILPGKEINEKSKKFKQ+++S+A+EG+DII A  R  EKSIARLE
Sbjct: 121 VFDHVDELPRPTKRPKILPGKEINEKSKKFKQQLRSVAVEGEDIITASKRVCEKSIARLE 180

Query: 196 AKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           AKEAA KAAAK EE+RVA+LKKVRGEKWLPSIAREMKLQ+Q+
Sbjct: 181 AKEAAVKAAAKREEDRVAKLKKVRGEKWLPSIAREMKLQSQQ 222

[Close]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match: gi|747102420|ref|XP_011099375.1| (PREDICTED: uncharacterized protein LOC105177819 isoform X1 [Sesamum indicum])

HSP 1 Score: 219.5 bits (558), Expect = 6.0e-54
Identity = 121/215 (56.28%), Postives = 162/215 (75.35%), Query Frame = 1 

Query: 22  GGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGP 81
           G  G  SSSGEEDGDA+WRAAIDSVT  + F    +NG P++S+  A   D++   N  P
Sbjct: 2   GRSGSSSSSGEEDGDAEWRAAIDSVTAAATFSKRDSNGFPSSSSGRAILEDEEE--NPKP 61

Query: 82  QPPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDE 141
           Q  K YQIKA K+L+++L+ T+EVV ++T +   D   ++ G+RLFK+A  G+VFDHI E
Sbjct: 62  QSIKHYQIKALKLLDDLLDKTIEVVTNTTPVLEKDPAENDAGVRLFKDASPGIVFDHIVE 121

Query: 142 LQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAK 201
           L  P KKPK++PG+E++EKSKKF++++QS A+EG DIIAA   A +KS+A+LEA+EAAAK
Sbjct: 122 LHGPKKKPKLVPGEELDEKSKKFRKKLQSAAVEGADIIAAARAASQKSLAKLEAREAAAK 181

Query: 202 AAAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
            AAK EEERVAELKK+RGE+WLPS+AR+M +  QR
Sbjct: 182 VAAKREEERVAELKKIRGERWLPSVARQMGISTQR 214

[Close]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match: gi|1012336061|gb|KYP47372.1| (hypothetical protein KK1_030986 [Cajanus cajan])

HSP 1 Score: 212.2 bits (539), Expect = 9.6e-52
Identity = 122/219 (55.71%), Postives = 158/219 (72.15%), Query Frame = 1 

Query: 15  GMGDQRNGGYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDD 74
           G G+  NG     SSSGEEDGDA WRAAIDS+  T+ ++SS      + +  T  N   D
Sbjct: 2   GEGEPTNGYC---SSSGEEDGDASWRAAIDSIAQTTTYVSS------SITKRTHPNDHHD 61

Query: 75  SELNLGPQPPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGV 134
            + NL  Q  K YQ+KAQK+L  ILE T+E+V     +  +D K  E GIRLFKNA  G+
Sbjct: 62  HDNNLKTQRIKHYQLKAQKLLNEILENTIEIVRKPVPVVDEDPKIEECGIRLFKNAQPGI 121

Query: 135 VFDHIDELQRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLE 194
           VFDH+DE Q P K+P+ILPG +I EKSKKF++RI+S+A++G D+IAA N A +KS+ARLE
Sbjct: 122 VFDHVDEPQPPRKRPRILPGGDIEEKSKKFRKRIRSVAVDGIDVIAAANNAYKKSLARLE 181

Query: 195 AKEAAAKAAAKGEEERVAELKKVRGEKWLPSIAREMKLQ 234
           AK+AAAKA AK EEERVA LKK+RGE+WLPS+A+EM+++
Sbjct: 182 AKDAAAKAKAKREEERVANLKKIRGERWLPSMAKEMQVK 211

[Close]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match: gi|359480621|ref|XP_003632503.1| (PREDICTED: uncharacterized protein LOC100854286 [Vitis vinifera])

HSP 1 Score: 212.2 bits (539), Expect = 9.6e-52
Identity = 124/214 (57.94%), Postives = 165/214 (77.10%), Query Frame = 1 

Query: 23  GYGGDSSSGEEDGDAQWRAAIDSVTTTSVFLSSLTNGLPATSTTTASNSDDDSELNLGPQ 82
           G G  SSSGEEDGDA W+AAIDSV  ++V  ++ +NG  A S  +A  S D +  N   Q
Sbjct: 5   GSGSCSSSGEEDGDADWKAAIDSV--SAVATTATSNGFAAASKDSAV-STDGTNSNQKSQ 64

Query: 83  PPKQYQIKAQKMLENILETTLEVVEHSTAIPCDDSKTSEGGIRLFKNAPVGVVFDHIDEL 142
             K YQIKAQK+L++I+E TL +VE    I  D+ KT+EGGIRLFK+AP G+VFDH++++
Sbjct: 65  NLKHYQIKAQKLLDDIIENTLVMVEDLIHI-SDNEKTNEGGIRLFKHAPPGIVFDHMEKI 124

Query: 143 QRPTKKPKILPGKEINEKSKKFKQRIQSMAIEGKDIIAAGNRAREKSIARLEAKEAAAKA 202
           Q+P K+P+ILPG EI+EKSKKF+ +++S+A++G DI+AA   A +KS+ARLEAK+AAAKA
Sbjct: 125 QQPRKRPRILPGNEIDEKSKKFRGQLRSVAVDGVDIMAAARDACQKSVARLEAKDAAAKA 184

Query: 203 AAKGEEERVAELKKVRGEKWLPSIAREMKLQAQR 237
           AAK EEERVAELK+ RGE+WLPSIARE +++  R
Sbjct: 185 AAKREEERVAELKRTRGERWLPSIARERQIKLGR 214

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g11330 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG05g11330 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LMM8_CUCSA1.6e-8577.93Uncharacterized protein OS=Cucumis sativus GN=Csa_2G285320 PE=4 SV=1[more]
A0A151RXU2_CAJCA6.7e-5255.71Uncharacterized protein OS=Cajanus cajan GN=KK1_030986 PE=4 SV=1[more]
F6HST2_VITVI6.7e-5257.94Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00130 PE=4 SV=... [more]
D7TT61_VITVI2.5e-5157.48Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0129g00050 PE=4 SV=... [more]
A0A0L9TPL2_PHAAN1.7e-5055.98Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g197200 PE=4 SV=1[more]
BLAST of Cp4.1LG05g11330 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G49890.11.5e-4248.58 unknown protein[more]
BLAST of Cp4.1LG05g11330 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659115997|ref|XP_008457847.1|7.1e-8780.09PREDICTED: uncharacterized protein LOC103497429 [Cucumis melo][more]
gi|449460586|ref|XP_004148026.1|2.3e-8577.93PREDICTED: uncharacterized protein LOC101203340 [Cucumis sativus][more]
gi|747102420|ref|XP_011099375.1|6.0e-5456.28PREDICTED: uncharacterized protein LOC105177819 isoform X1 [Sesamum indicum][more]
gi|1012336061|gb|KYP47372.1|9.6e-5255.71hypothetical protein KK1_030986 [Cajanus cajan][more]
gi|359480621|ref|XP_003632503.1|9.6e-5257.94PREDICTED: uncharacterized protein LOC100854286 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009987 cellular process
biological_process GO:0044699 single-organism process
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003674 molecular_function
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g11330.1Cp4.1LG05g11330.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 190..210
scor
NoneNo IPR availablePANTHERPTHR36765FAMILY NOT NAMEDcoord: 19..236
score: 5.7
NoneNo IPR availablePANTHERPTHR36765:SF1SUBFAMILY NOT NAMEDcoord: 19..236
score: 5.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g11330Cucsa.366980Cucumber (Gy14) v1cgycpeB0974
Cp4.1LG05g11330CmaCh02G005380Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g11330CmoCh02G005500Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g11330Cla020205Watermelon (97103) v1cpewmB749
Cp4.1LG05g11330Csa2G285320Cucumber (Chinese Long) v2cpecuB710
Cp4.1LG05g11330MELO3C020909Melon (DHL92) v3.5.1cpemeB663
Cp4.1LG05g11330ClCG02G012630Watermelon (Charleston Gray)cpewcgB666
Cp4.1LG05g11330CSPI02G14190Wild cucumber (PI 183967)cpecpiB712
Cp4.1LG05g11330Lsi10G005520Bottle gourd (USVL1VR-Ls)cpelsiB604
Cp4.1LG05g11330MELO3C020909.2Melon (DHL92) v3.6.1cpemedB791
Cp4.1LG05g11330Bhi10G001707Wax gourdcpewgoB0966
Cp4.1LG05g11330Carg11614Silver-seed gourdcarcpeB1476
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g11330Melon (DHL92) v3.6.1cpemedB794
Cp4.1LG05g11330Cucumber (Chinese Long) v3cpecucB0885
Cp4.1LG05g11330Cucumber (Gy14) v1cgycpeB0223
Cp4.1LG05g11330Cucumber (Gy14) v1cgycpeB0977
Cp4.1LG05g11330Cucurbita maxima (Rimu)cmacpeB585
Cp4.1LG05g11330Cucurbita moschata (Rifu)cmocpeB534
Cp4.1LG05g11330Wild cucumber (PI 183967)cpecpiB764
Cp4.1LG05g11330Cucumber (Chinese Long) v2cpecuB763
Cp4.1LG05g11330Bottle gourd (USVL1VR-Ls)cpelsiB596
Cp4.1LG05g11330Bottle gourd (USVL1VR-Ls)cpelsiB610
Cp4.1LG05g11330Watermelon (Charleston Gray)cpewcgB642
Cp4.1LG05g11330Watermelon (Charleston Gray)cpewcgB655
Cp4.1LG05g11330Watermelon (97103) v1cpewmB734
Cp4.1LG05g11330Watermelon (97103) v1cpewmB720
Cp4.1LG05g11330Cucumber (Gy14) v2cgybcpeB246
Cp4.1LG05g11330Melon (DHL92) v3.5.1cpemeB660
Cp4.1LG05g11330Melon (DHL92) v3.5.1cpemeB706