Cp4.1LG03g10190.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g10190.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	ADP-ribosylation factor, putative
Location	Cp4.1LG03 : 11706917 .. 11709079 (-)
Sequence length	1237

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAGGCCCAAACAAAAAACAAAATTTAAGTCTTCATTTTTTTAAAATAAAATTATAATTTTCTTGCAGATTTTTGGTGAACACAACTAACTTAATGGAGTGGTTTTCCGATTGTGGATATTATACCCAACTAAACACGGCGTTACCCTCATAAAGATGGACACGTCAGCCGCCACAATGGATCAAATGATCCTTGCTGTCCACCACCTTCGCTTAAAGCTCATTTAACTTAGCGCGGAAGAATATTATCATTTTATTTCGGAAGCTAGAAATTTCATCTCTGAATCGCGGATTAGGGTTTTCTCTTTGGCTTCTACATCGGTTCCTTCTGTAAAGCTCCTGCACTTCACTCTTCCATATCGGATTTCCCGTATCGATTTAATCAGGTTCGGTTACTGTCTTTTCAATTTCTGCCCTTTTTGTTTTCTGAAGCAATTCTGATCTGGATCTGCAATTTTTCCATCCCTCCGGGTCTTCTCGTCTAGTTTTAATTTCTAGGCGATTCCAATCGTTTTCGCCAACAAATTCCATGTATTTGACTTCTATGTTTTTGTTGATGAGGAATTTATGTTTTTCTTTGTTTGGATATTTAGGCGATTTGTCGGTCTTTTCCTGTGGGATTCGATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTGCAGTCAATCTATATCAATTTACTTTTACTTTGCCTTCTTATTATTCTATTTTTTTATGGATGCTCCCTGTTTGTTGTTCATTATATTCCACCCATTGGGGATTCTTCTCCTCCATCAATTTCACTGTAGTATTCTATTTGAGTATTGGTTTTGTATAGTTTCGCACTGTGATCTTTGAATCCTCCGGCTAGTTGAATGTTTAGTTGTCACGTGAAATTGCGAGTTTGTGTATTTGGTTGATGCAAAAGATTGACCTAGAAAAGAAAATGTGATGCAAGATATGGGAATTCGTGTGTTGTCTGTAAACCTGATACCTTGCGTGTGAAGTCCCAAAGTAGTTCTTGAATAAAGCAACGTATTCCCTTTTTTTATCTTCGGGAAGTCTAGTCCTGTGAAAAGCCCAGCCGAAGCATGAGATTTATCCTGGCTTTTTATGAGCGTTTAACTGGGAACTTCCCAAAACCCCCCCACAATTTGCAGTCTTTCTGAAGGGAAATATTGGGTTGATGTTTGTGATCTGCGTGTGGTTTCCTCAGAAATTGGGCTGGTTTATTAGGATAGTAGAAACCAGAGTACGTGTTGGAAAAGTAGATATTTAGATAATCCATTTACATAGGGAACTTTGCACAAAACCCGTCTTTGTTCCTTTTATGGAATGTGAAACTGAGCTTTTCCCTCAACTAAACATGTTCCATTTGGCAATTTTTTTTCTCTAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGATACGAAAAACTCACAGCTTGTGAGATTCATTCTTGTAATCTTGTGGTTAAACTCCTCGCCCTTTATCTCTTCTTATACAAGTCGAGCAGTTTATATATCCTGTTTAATTCCATTTTGATTTAAGGGTTGTATTAAATTTTTTGAAAAATGGAGCCATATAAAAGAATTGCCTAGTGTCATTCCAAATGAGACGGAAGGGTTCATATGGATTTTGTTAAAAGATTACCTGTTTTTCTGCCCTTAAAATGTTGTCGATAAGATTATAATA

mRNA sequence

CTCAGGCCCAAACAAAAAACAAAATTTAAGTCTTCATTTTTTTAAAATAAAATTATAATTTTCTTGCAGATTTTTGGTGAACACAACTAACTTAATGGAGTGGTTTTCCGATTGTGGATATTATACCCAACTAAACACGGCGTTACCCTCATAAAGATGGACACGTCAGCCGCCACAATGGATCAAATGATCCTTGCTGTCCACCACCTTCGCTTAAAGCTCATTTAACTTAGCGCGGAAGAATATTATCATTTTATTTCGGAAGCTAGAAATTTCATCTCTGAATCGCGGATTAGGGTTTTCTCTTTGGCTTCTACATCGGTTCCTTCTGTAAAGCTCCTGCACTTCACTCTTCCATATCGGATTTCCCGTATCGATTTAATCAGGCGATTTGTCGGTCTTTTCCTGTGGGATTCGATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGATACGAAAAACTCACAGCTTGTGAGATTCATTCTTGTAATCTTGTGGTTAAACTCCTCGCCCTTTATCTCTTCTTATACAAGTCGAGCAGTTTATATATCCTGTTTAATTCCATTTTGATTTAAGGGTTGTATTAAATTTTTTGAAAAATGGAGCCATATAAAAGAATTGCCTAGTGTCATTCCAAATGAGACGGAAGGGTTCATATGGATTTTGTTAAAAGATTACCTGTTTTTCTGCCCTTAAAATGTTGTCGATAAGATTATAATA

Coding sequence (CDS)

ATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGA

Protein sequence

MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSVVLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGKATS

Homology

[Close]

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.7e-62
Identity = 112/180 (62.22%), Postives = 144/180 (80.00%), Query Frame = 1


Query: 1   MGAFMSRF---WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELV 60
           MG+ +S F   W   F   EYK+++VGL+ AGKTTTLYKL L EVV+T PTVGSN+EE V
Sbjct: 1   MGSSLSIFASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFV 60

Query: 61  YKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQ 120
           Y+NIR  +WDLGGQD LR++W  YY  T AVI+VIDSTDRAR+ ++KEELF++L HE+L+
Sbjct: 61  YRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLK 120

Query: 121 QSVVLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHV 178
           +S++L++ANKQDLKDAM+P E++  LSLHSIK+HD+HIQAC ALTG GL  GL W+  H+
Sbjct: 121 KSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180

[Close]

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-56
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-56
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.0e-56
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.5e-56
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K  MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL
Match: A0A0A0L5C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144180 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 9.7e-99
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL
Match: A0A0D2NXX5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G244300 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 8.2e-98
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDS DRARITIMKEELFRLL HEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSVDRARITIMKEELFRLLAHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL
Match: W9S5U2_9ROSA (ADP-ribosylation factor-like protein 5 OS=Morus notabilis GN=L484_013353 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.1e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SR WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSRVWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+IMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQAC ALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL
Match: A0A061ELC7_THECC (ADP-ribosylation factor C1 isoform 1 OS=Theobroma cacao GN=TCM_020738 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.3e-97
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLG+VVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGDVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVIVVIDSTDRARITIMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARITIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQ+C ALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQSCCALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL
Match: A0A0J8BJ73_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214970 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95
Identity = 172/183 (93.99%), Postives = 176/183 (96.17%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGA MSRFWFMLFPAKEYKIV+VGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGALMSRFWFMLFPAKEYKIVIVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSW TYYRGTHAVIVVIDSTDRARI+IMK+EL RLL  EDLQQ+V
Sbjct: 61  IRFEVWDLGGQDRLRTSWTTYYRGTHAVIVVIDSTDRARISIMKDELLRLLPSEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHV GK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVAGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10
Match: AT3G22950.1 (AT3G22950.1 ADP-ribosylation factor C1)

HSP 1 Score: 352.4 bits (903), Expect = 1.6e-97
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAFMSRFWFM+FPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+ MK+EL RLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDAL+LHSIKNHDWHIQA  A+TG+GLYDGLGWIAQ VTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-53
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++ GK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-53
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++ GK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 204.1 bits (518), Expect = 7.2e-53
Identity = 93/181 (51.38%), Postives = 130/181 (71.82%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 203.8 bits (517), Expect = 9.4e-53
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG    + +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr
Match: gi|449432644|ref|XP_004134109.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr
Match: gi|659076289|ref|XP_008438599.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-98
Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr
Match: gi|823178665|ref|XP_012487215.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Gossypium raimondii])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDS DRARITIMKEELFRLL HEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSVDRARITIMKEELFRLLAHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr
Match: gi|703142366|ref|XP_010107737.1| (ADP-ribosylation factor-like protein 5 [Morus notabilis])

HSP 1 Score: 362.1 bits (928), Expect = 5.8e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SR WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSRVWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+IMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQAC ALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr
Match: gi|590658651|ref|XP_007034914.1| (ADP-ribosylation factor C1 isoform 1 [Theobroma cacao])

HSP 1 Score: 361.7 bits (927), Expect = 7.6e-97
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1


Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLG+VVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGDVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVIVVIDSTDRARITIMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARITIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQ+C ALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQSCCALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g10190.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARL5_DICDI	2.7e-62	62.22	ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 ...	[more]
ARL5A_RAT	2.9e-56	58.38	ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1	[more]
ARL5A_HUMAN	2.9e-56	58.38	ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1	[more]
ARL5A_MOUSE	5.0e-56	58.38	ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=1 SV=1	[more]
ARL5A_BOVIN	6.5e-56	58.38	ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1	[more]

BLAST of Cp4.1LG03g10190.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5C3_CUCSA	9.7e-99	96.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144180 PE=3 SV=1	[more]
A0A0D2NXX5_GOSRA	8.2e-98	95.63	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G244300 PE=3 SV=1	[more]
W9S5U2_9ROSA	4.1e-97	95.63	ADP-ribosylation factor-like protein 5 OS=Morus notabilis GN=L484_013353 PE=3 SV...	[more]
A0A061ELC7_THECC	5.3e-97	93.99	ADP-ribosylation factor C1 isoform 1 OS=Theobroma cacao GN=TCM_020738 PE=3 SV=1	[more]
A0A0J8BJ73_BETVU	1.3e-95	93.99	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214970 PE=3 S...	[more]

BLAST of Cp4.1LG03g10190.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G22950.1	1.6e-97	92.35	ADP-ribosylation factor C1	[more]
AT1G70490.1	1.4e-53	51.93	Ras-related small GTP-binding family protein	[more]
AT1G23490.1	1.4e-53	51.93	ADP-ribosylation factor 1	[more]
AT1G10630.1	7.2e-53	51.38	ADP-ribosylation factor A1F	[more]
AT2G47170.1	9.4e-53	51.38	Ras-related small GTP-binding family protein	[more]

BLAST of Cp4.1LG03g10190.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449432644\|ref\|XP_004134109.1\|	1.4e-98	96.72	PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis sativus]	[more]
gi\|659076289\|ref\|XP_008438599.1\|	6.9e-98	96.17	PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo]	[more]
gi\|823178665\|ref\|XP_012487215.1\|	1.2e-97	95.63	PREDICTED: ADP-ribosylation factor-like protein 5 [Gossypium raimondii]	[more]
gi\|703142366\|ref\|XP_010107737.1\|	5.8e-97	95.63	ADP-ribosylation factor-like protein 5 [Morus notabilis]	[more]
gi\|590658651\|ref\|XP_007034914.1\|	7.6e-97	93.99	ADP-ribosylation factor C1 isoform 1 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0007264	small GTPase mediated signal transduction

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR024156	Small_GTPase_ARF
IPR006689	Small_GTPase_ARF/SAR
IPR005225	Small_GTP-bd_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006623	protein targeting to vacuole
biological_process	GO:0007033	vacuole organization
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005525	GTP binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG03g10190	Cp4.1LG03g10190	gene

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g10190.1:five_prime_utr:001	Cp4.1LG03g10190.1:five_prime_utr:001	five_prime_UTR
Cp4.1LG03g10190.1:five_prime_utr:002	Cp4.1LG03g10190.1:five_prime_utr:002	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g10190.1:cds:001	Cp4.1LG03g10190.1:cds:001	CDS
Cp4.1LG03g10190.1:cds:002	Cp4.1LG03g10190.1:cds:002	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g10190.1:three_prime_utr:001	Cp4.1LG03g10190.1:three_prime_utr:001	three_prime_UTR

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG03g10190.1	Cp4.1LG03g10190.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005225	Small GTP-binding protein domain	TIGRFAMs	TIGR00231	TIGR00231	coord: 16..145 score: 1.4
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 74..99 score: 6.0E-18coord: 19..42 score: 6.0E-18coord: 119..140 score: 6.0E-18coord: 47..71 score: 6.0
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 14..176 score: 2.9
IPR024156	Small GTPase superfamily, ARF type	PROFILE	PS51417	ARF	coord: 11..177 score: 23
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 5..177 score: 2.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 15..178 score: 9.9
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..181 score: 2.9E
None	No IPR available	PANTHER	PTHR11711:SF31	ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 5	coord: 1..181 score: 2.9E
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 18..180 score: 7.
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..181 score: 1.1
None	No IPR available	SMART	SM00178	sar_sub_1	coord: 1..177 score: 1.4