Cp4.1LG03g10190 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g10190
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionADP-ribosylation factor, putative
LocationCp4.1LG03 : 11706917 .. 11709079 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAGGCCCAAACAAAAAACAAAATTTAAGTCTTCATTTTTTTAAAATAAAATTATAATTTTCTTGCAGATTTTTGGTGAACACAACTAACTTAATGGAGTGGTTTTCCGATTGTGGATATTATACCCAACTAAACACGGCGTTACCCTCATAAAGATGGACACGTCAGCCGCCACAATGGATCAAATGATCCTTGCTGTCCACCACCTTCGCTTAAAGCTCATTTAACTTAGCGCGGAAGAATATTATCATTTTATTTCGGAAGCTAGAAATTTCATCTCTGAATCGCGGATTAGGGTTTTCTCTTTGGCTTCTACATCGGTTCCTTCTGTAAAGCTCCTGCACTTCACTCTTCCATATCGGATTTCCCGTATCGATTTAATCAGGTTCGGTTACTGTCTTTTCAATTTCTGCCCTTTTTGTTTTCTGAAGCAATTCTGATCTGGATCTGCAATTTTTCCATCCCTCCGGGTCTTCTCGTCTAGTTTTAATTTCTAGGCGATTCCAATCGTTTTCGCCAACAAATTCCATGTATTTGACTTCTATGTTTTTGTTGATGAGGAATTTATGTTTTTCTTTGTTTGGATATTTAGGCGATTTGTCGGTCTTTTCCTGTGGGATTCGATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTGCAGTCAATCTATATCAATTTACTTTTACTTTGCCTTCTTATTATTCTATTTTTTTATGGATGCTCCCTGTTTGTTGTTCATTATATTCCACCCATTGGGGATTCTTCTCCTCCATCAATTTCACTGTAGTATTCTATTTGAGTATTGGTTTTGTATAGTTTCGCACTGTGATCTTTGAATCCTCCGGCTAGTTGAATGTTTAGTTGTCACGTGAAATTGCGAGTTTGTGTATTTGGTTGATGCAAAAGATTGACCTAGAAAAGAAAATGTGATGCAAGATATGGGAATTCGTGTGTTGTCTGTAAACCTGATACCTTGCGTGTGAAGTCCCAAAGTAGTTCTTGAATAAAGCAACGTATTCCCTTTTTTTATCTTCGGGAAGTCTAGTCCTGTGAAAAGCCCAGCCGAAGCATGAGATTTATCCTGGCTTTTTATGAGCGTTTAACTGGGAACTTCCCAAAACCCCCCCACAATTTGCAGTCTTTCTGAAGGGAAATATTGGGTTGATGTTTGTGATCTGCGTGTGGTTTCCTCAGAAATTGGGCTGGTTTATTAGGATAGTAGAAACCAGAGTACGTGTTGGAAAAGTAGATATTTAGATAATCCATTTACATAGGGAACTTTGCACAAAACCCGTCTTTGTTCCTTTTATGGAATGTGAAACTGAGCTTTTCCCTCAACTAAACATGTTCCATTTGGCAATTTTTTTTCTCTAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGATACGAAAAACTCACAGCTTGTGAGATTCATTCTTGTAATCTTGTGGTTAAACTCCTCGCCCTTTATCTCTTCTTATACAAGTCGAGCAGTTTATATATCCTGTTTAATTCCATTTTGATTTAAGGGTTGTATTAAATTTTTTGAAAAATGGAGCCATATAAAAGAATTGCCTAGTGTCATTCCAAATGAGACGGAAGGGTTCATATGGATTTTGTTAAAAGATTACCTGTTTTTCTGCCCTTAAAATGTTGTCGATAAGATTATAATA

mRNA sequence

CTCAGGCCCAAACAAAAAACAAAATTTAAGTCTTCATTTTTTTAAAATAAAATTATAATTTTCTTGCAGATTTTTGGTGAACACAACTAACTTAATGGAGTGGTTTTCCGATTGTGGATATTATACCCAACTAAACACGGCGTTACCCTCATAAAGATGGACACGTCAGCCGCCACAATGGATCAAATGATCCTTGCTGTCCACCACCTTCGCTTAAAGCTCATTTAACTTAGCGCGGAAGAATATTATCATTTTATTTCGGAAGCTAGAAATTTCATCTCTGAATCGCGGATTAGGGTTTTCTCTTTGGCTTCTACATCGGTTCCTTCTGTAAAGCTCCTGCACTTCACTCTTCCATATCGGATTTCCCGTATCGATTTAATCAGGCGATTTGTCGGTCTTTTCCTGTGGGATTCGATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGATACGAAAAACTCACAGCTTGTGAGATTCATTCTTGTAATCTTGTGGTTAAACTCCTCGCCCTTTATCTCTTCTTATACAAGTCGAGCAGTTTATATATCCTGTTTAATTCCATTTTGATTTAAGGGTTGTATTAAATTTTTTGAAAAATGGAGCCATATAAAAGAATTGCCTAGTGTCATTCCAAATGAGACGGAAGGGTTCATATGGATTTTGTTAAAAGATTACCTGTTTTTCTGCCCTTAAAATGTTGTCGATAAGATTATAATA

Coding sequence (CDS)

ATGGGGGCTTTCATGTCGAGATTCTGGTTCATGTTATTTCCGGCAAAAGAATACAAGATCGTGGTGGTTGGGTTGGATAATGCGGGAAAGACGACGACTCTTTACAAATTGCACTTGGGAGAGGTTGTTACTACCCATCCTACCGTGGGAAGCAATGTTGAAGAGCTTGTGTACAAGAACATTCGATTCGAGGTATGGGATCTTGGTGGGCAAGACAGGCTTAGGACATCATGGGCAACATATTACCGCGGAACGCATGCAGTGATTGTTGTGATAGACAGCACAGATAGAGCAAGAATCACCATCATGAAGGAGGAGCTGTTCAGACTACTCGGTCATGAAGATCTTCAGCAATCTGTGGTGCTGGTCTTTGCAAACAAACAGGATCTTAAGGATGCCATGACTCCCGTTGAAATCACCGATGCTCTTTCACTCCACAGCATTAAGAATCACGACTGGCACATTCAAGCCTGCTCTGCCCTCACTGGAGACGGTCTATACGATGGTCTTGGATGGATTGCACAGCACGTTACCGGCAAAGCGACTAGTTGA

Protein sequence

MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSVVLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGKATS
Homology
[Close]
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match: ARL5_DICDI (ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 2.7e-62
Identity = 112/180 (62.22%), Postives = 144/180 (80.00%), Query Frame = 1 

Query: 1   MGAFMSRF---WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELV 60
           MG+ +S F   W   F   EYK+++VGL+ AGKTTTLYKL L EVV+T PTVGSN+EE V
Sbjct: 1   MGSSLSIFASIWNRFFNNAEYKVIIVGLNAAGKTTTLYKLLLDEVVSTTPTVGSNLEEFV 60

Query: 61  YKNIRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQ 120
           Y+NIR  +WDLGGQD LR++W  YY  T AVI+VIDSTDRAR+ ++KEELF++L HE+L+
Sbjct: 61  YRNIRLLMWDLGGQDLLRSTWNQYYINTQAVILVIDSTDRARVNLIKEELFKMLAHENLK 120

Query: 121 QSVVLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHV 178
           +S++L++ANKQDLKDAM+P E++  LSLHSIK+HD+HIQAC ALTG GL  GL W+  H+
Sbjct: 121 KSIILIYANKQDLKDAMSPTELSTLLSLHSIKDHDYHIQACCALTGQGLESGLDWLVSHI 180

[Close]
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match: ARL5A_RAT (ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-56
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match: ARL5A_HUMAN (ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.9e-56
Identity = 101/173 (58.38%), Postives = 133/173 (76.88%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match: ARL5A_MOUSE (ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=1 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 5.0e-56
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVVNN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRPSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K+ MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match: ARL5A_BOVIN (ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 6.5e-56
Identity = 101/173 (58.38%), Postives = 132/173 (76.30%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   +R W  LF  +E+K+++VGLDNAGKTT LY+  + EVV T PT+GSNVEE+V  N
Sbjct: 1   MGILFTRIW-RLFNHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
            RF +WD+GGQ+ LR+SW TYY  T  VIVV+DSTDR RI++ +EEL+++L HEDL+++ 
Sbjct: 61  TRFLMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDRERISVTREELYKMLAHEDLRKAG 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWI 174
           +L+FANKQD+K  MT  EI+  L L SIK+H WHIQAC ALTG+GL  GL W+
Sbjct: 121 LLIFANKQDVKGCMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWM 172

[Close]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match: A0A0A0L5C3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144180 PE=3 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 9.7e-99
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match: A0A0D2NXX5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G244300 PE=3 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 8.2e-98
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDS DRARITIMKEELFRLL HEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSVDRARITIMKEELFRLLAHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match: W9S5U2_9ROSA (ADP-ribosylation factor-like protein 5 OS=Morus notabilis GN=L484_013353 PE=3 SV=1)

HSP 1 Score: 362.1 bits (928), Expect = 4.1e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SR WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSRVWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+IMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQAC ALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match: A0A061ELC7_THECC (ADP-ribosylation factor C1 isoform 1 OS=Theobroma cacao GN=TCM_020738 PE=3 SV=1)

HSP 1 Score: 361.7 bits (927), Expect = 5.3e-97
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLG+VVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGDVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVIVVIDSTDRARITIMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARITIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQ+C ALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQSCCALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match: A0A0J8BJ73_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214970 PE=3 SV=1)

HSP 1 Score: 357.1 bits (915), Expect = 1.3e-95
Identity = 172/183 (93.99%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGA MSRFWFMLFPAKEYKIV+VGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGALMSRFWFMLFPAKEYKIVIVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSW TYYRGTHAVIVVIDSTDRARI+IMK+EL RLL  EDLQQ+V
Sbjct: 61  IRFEVWDLGGQDRLRTSWTTYYRGTHAVIVVIDSTDRARISIMKDELLRLLPSEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHV GK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVAGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match: AT3G22950.1 (AT3G22950.1 ADP-ribosylation factor C1)

HSP 1 Score: 352.4 bits (903), Expect = 1.6e-97
Identity = 169/183 (92.35%), Postives = 176/183 (96.17%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAFMSRFWFM+FPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFMSRFWFMMFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+ MK+EL RLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISFMKDELARLLGHEDLQNSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDAL+LHSIKNHDWHIQA  A+TG+GLYDGLGWIAQ VTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALNLHSIKNHDWHIQASCAVTGEGLYDGLGWIAQKVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match: AT1G70490.1 (AT1G70490.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-53
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++ GK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match: AT1G23490.1 (AT1G23490.1 ADP-ribosylation factor 1)

HSP 1 Score: 206.5 bits (524), Expect = 1.4e-53
Identity = 94/181 (51.93%), Postives = 131/181 (72.38%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++ GK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match: AT1G10630.1 (AT1G10630.1 ADP-ribosylation factor A1F)

HSP 1 Score: 204.1 bits (518), Expect = 7.2e-53
Identity = 93/181 (51.38%), Postives = 130/181 (71.82%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG   ++ +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match: AT2G47170.1 (AT2G47170.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 203.8 bits (517), Expect = 9.4e-53
Identity = 93/181 (51.38%), Postives = 129/181 (71.27%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MG    + +  LF  KE +I++VGLD AGKTT LYKL LGE+VTT PT+G NVE + YKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           I F VWD+GGQD++R  W  Y++ T  +I V+DS DR R+   ++EL R+L  ++L+ +V
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDL +AM   EITD L LHS++   W+IQ+  A +G+GLY+GL W++ ++  K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match: gi|449432644|ref|XP_004134109.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98
Identity = 177/183 (96.72%), Postives = 181/183 (98.91%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match: gi|659076289|ref|XP_008438599.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 6.9e-98
Identity = 176/183 (96.17%), Postives = 180/183 (98.36%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVI VIDSTDRARITIMK+ELFRLLGHEDLQQ+V
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIAVIDSTDRARITIMKDELFRLLGHEDLQQAV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQQVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match: gi|823178665|ref|XP_012487215.1| (PREDICTED: ADP-ribosylation factor-like protein 5 [Gossypium raimondii])

HSP 1 Score: 364.4 bits (934), Expect = 1.2e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFISKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDS DRARITIMKEELFRLL HEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSVDRARITIMKEELFRLLAHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match: gi|703142366|ref|XP_010107737.1| (ADP-ribosylation factor-like protein 5 [Morus notabilis])

HSP 1 Score: 362.1 bits (928), Expect = 5.8e-97
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+SR WFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSRVWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARI+IMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARISIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           VLVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQAC ALTGDGLYDGLGWIAQ VTGK
Sbjct: 121 VLVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQACCALTGDGLYDGLGWIAQRVTGK 180

Query: 181 ATS 184
           ATS
Sbjct: 181 ATS 183

[Close]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match: gi|590658651|ref|XP_007034914.1| (ADP-ribosylation factor C1 isoform 1 [Theobroma cacao])

HSP 1 Score: 361.7 bits (927), Expect = 7.6e-97
Identity = 172/183 (93.99%), Postives = 179/183 (97.81%), Query Frame = 1 

Query: 1   MGAFMSRFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGEVVTTHPTVGSNVEELVYKN 60
           MGAF+S+FWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLG+VVTTHPTVGSNVEELVYKN
Sbjct: 1   MGAFVSKFWFMLFPAKEYKIVVVGLDNAGKTTTLYKLHLGDVVTTHPTVGSNVEELVYKN 60

Query: 61  IRFEVWDLGGQDRLRTSWATYYRGTHAVIVVIDSTDRARITIMKEELFRLLGHEDLQQSV 120
           IRFEVWDLGGQ+RLRTSWATYYRGTHAVIVVIDSTDRARITIMK+ELFRLLGHEDLQ SV
Sbjct: 61  IRFEVWDLGGQERLRTSWATYYRGTHAVIVVIDSTDRARITIMKDELFRLLGHEDLQHSV 120

Query: 121 VLVFANKQDLKDAMTPVEITDALSLHSIKNHDWHIQACSALTGDGLYDGLGWIAQHVTGK 180
           +LVFANKQDLKDAMTP EITDALSLHSIKNHDWHIQ+C ALTGDGLYDGLGWIAQHVTGK
Sbjct: 121 ILVFANKQDLKDAMTPAEITDALSLHSIKNHDWHIQSCCALTGDGLYDGLGWIAQHVTGK 180

Query: 181 ATS 184
           A S
Sbjct: 181 APS 183

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g10190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARL5_DICDI2.7e-6262.22ADP-ribosylation factor-like protein 5 OS=Dictyostelium discoideum GN=arl5 PE=3 ... [more]
ARL5A_RAT2.9e-5658.38ADP-ribosylation factor-like protein 5A OS=Rattus norvegicus GN=Arl5a PE=2 SV=1[more]
ARL5A_HUMAN2.9e-5658.38ADP-ribosylation factor-like protein 5A OS=Homo sapiens GN=ARL5A PE=1 SV=1[more]
ARL5A_MOUSE5.0e-5658.38ADP-ribosylation factor-like protein 5A OS=Mus musculus GN=Arl5a PE=1 SV=1[more]
ARL5A_BOVIN6.5e-5658.38ADP-ribosylation factor-like protein 5A OS=Bos taurus GN=ARL5A PE=2 SV=1[more]
BLAST of Cp4.1LG03g10190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L5C3_CUCSA9.7e-9996.72Uncharacterized protein OS=Cucumis sativus GN=Csa_3G144180 PE=3 SV=1[more]
A0A0D2NXX5_GOSRA8.2e-9895.63Uncharacterized protein OS=Gossypium raimondii GN=B456_006G244300 PE=3 SV=1[more]
W9S5U2_9ROSA4.1e-9795.63ADP-ribosylation factor-like protein 5 OS=Morus notabilis GN=L484_013353 PE=3 SV... [more]
A0A061ELC7_THECC5.3e-9793.99ADP-ribosylation factor C1 isoform 1 OS=Theobroma cacao GN=TCM_020738 PE=3 SV=1[more]
A0A0J8BJ73_BETVU1.3e-9593.99Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214970 PE=3 S... [more]
BLAST of Cp4.1LG03g10190 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G22950.11.6e-9792.35 ADP-ribosylation factor C1[more]
AT1G70490.11.4e-5351.93 Ras-related small GTP-binding family protein[more]
AT1G23490.11.4e-5351.93 ADP-ribosylation factor 1[more]
AT1G10630.17.2e-5351.38 ADP-ribosylation factor A1F[more]
AT2G47170.19.4e-5351.38 Ras-related small GTP-binding family protein[more]
BLAST of Cp4.1LG03g10190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432644|ref|XP_004134109.1|1.4e-9896.72PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis sativus][more]
gi|659076289|ref|XP_008438599.1|6.9e-9896.17PREDICTED: ADP-ribosylation factor-like protein 5 [Cucumis melo][more]
gi|823178665|ref|XP_012487215.1|1.2e-9795.63PREDICTED: ADP-ribosylation factor-like protein 5 [Gossypium raimondii][more]
gi|703142366|ref|XP_010107737.1|5.8e-9795.63ADP-ribosylation factor-like protein 5 [Morus notabilis][more]
gi|590658651|ref|XP_007034914.1|7.6e-9793.99ADP-ribosylation factor C1 isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR024156Small_GTPase_ARF
IPR006689Small_GTPase_ARF/SAR
IPR005225Small_GTP-bd_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007030 Golgi organization
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0007033 vacuole organization
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005525 GTP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g10190.1Cp4.1LG03g10190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 16..145
score: 1.4
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 74..99
score: 6.0E-18coord: 19..42
score: 6.0E-18coord: 119..140
score: 6.0E-18coord: 47..71
score: 6.0
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 14..176
score: 2.9
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 11..177
score: 23
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 5..177
score: 2.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 15..178
score: 9.9
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..181
score: 2.9E
NoneNo IPR availablePANTHERPTHR11711:SF31ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 5coord: 1..181
score: 2.9E
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..180
score: 7.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
score: 1.1
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..177
score: 1.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g10190Cucsa.254750Cucumber (Gy14) v1cgycpeB0682
Cp4.1LG03g10190CmaCh14G017620Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g10190CmoCh14G018020Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g10190CmoCh06G013670Cucurbita moschata (Rifu)cmocpeB787
Cp4.1LG03g10190Cla021580Watermelon (97103) v1cpewmB613
Cp4.1LG03g10190Csa3G144180Cucumber (Chinese Long) v2cpecuB609
Cp4.1LG03g10190MELO3C006488Melon (DHL92) v3.5.1cpemeB585
Cp4.1LG03g10190ClCG05G004750Watermelon (Charleston Gray)cpewcgB559
Cp4.1LG03g10190CSPI03G12640Wild cucumber (PI 183967)cpecpiB611
Cp4.1LG03g10190Lsi05G016510Bottle gourd (USVL1VR-Ls)cpelsiB506
Cp4.1LG03g10190MELO3C006488.2Melon (DHL92) v3.6.1cpemedB693
Cp4.1LG03g10190CsaV3_3G012770Cucumber (Chinese Long) v3cpecucB0759
Cp4.1LG03g10190Bhi01G000539Wax gourdcpewgoB0783
Cp4.1LG03g10190CsGy3G012810Cucumber (Gy14) v2cgybcpeB406
Cp4.1LG03g10190Carg06181Silver-seed gourdcarcpeB1331
Cp4.1LG03g10190Carg16599Silver-seed gourdcarcpeB0334
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g10190Cp4.1LG08g03680Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g10190Melon (DHL92) v3.6.1cpemedB686
Cp4.1LG03g10190Silver-seed gourdcarcpeB0454
Cp4.1LG03g10190Silver-seed gourdcarcpeB1061
Cp4.1LG03g10190Silver-seed gourdcarcpeB1098
Cp4.1LG03g10190Cucumber (Chinese Long) v3cpecucB0745
Cp4.1LG03g10190Cucumber (Chinese Long) v3cpecucB0746
Cp4.1LG03g10190Wax gourdcpewgoB0764
Cp4.1LG03g10190Wax gourdcpewgoB0800
Cp4.1LG03g10190Cucurbita pepo (Zucchini)cpecpeB184
Cp4.1LG03g10190Cucurbita pepo (Zucchini)cpecpeB266
Cp4.1LG03g10190Cucurbita pepo (Zucchini)cpecpeB333
Cp4.1LG03g10190Cucurbita pepo (Zucchini)cpecpeB478
Cp4.1LG03g10190Cucumber (Gy14) v1cgycpeB1025
Cp4.1LG03g10190Cucurbita maxima (Rimu)cmacpeB402
Cp4.1LG03g10190Cucurbita maxima (Rimu)cmacpeB536
Cp4.1LG03g10190Cucurbita maxima (Rimu)cmacpeB640
Cp4.1LG03g10190Cucurbita maxima (Rimu)cmacpeB837
Cp4.1LG03g10190Cucurbita maxima (Rimu)cmacpeB928
Cp4.1LG03g10190Cucurbita moschata (Rifu)cmocpeB364
Cp4.1LG03g10190Cucurbita moschata (Rifu)cmocpeB590
Cp4.1LG03g10190Cucurbita moschata (Rifu)cmocpeB862
Cp4.1LG03g10190Wild cucumber (PI 183967)cpecpiB598
Cp4.1LG03g10190Cucumber (Chinese Long) v2cpecuB596
Cp4.1LG03g10190Bottle gourd (USVL1VR-Ls)cpelsiB484
Cp4.1LG03g10190Bottle gourd (USVL1VR-Ls)cpelsiB510
Cp4.1LG03g10190Watermelon (Charleston Gray)cpewcgB561
Cp4.1LG03g10190Watermelon (Charleston Gray)cpewcgB570
Cp4.1LG03g10190Watermelon (97103) v1cpewmB605
Cp4.1LG03g10190Watermelon (97103) v1cpewmB622
Cp4.1LG03g10190Silver-seed gourdcarcpeB0327
Cp4.1LG03g10190Melon (DHL92) v3.5.1cpemeB579
Cp4.1LG03g10190Cucumber (Gy14) v2cgybcpeB231