Cp4.1LG02g07820.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g07820.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	AP-4 complex subunit mu
Location	Cp4.1LG02 : 527833 .. 532056 (+)
Sequence length	1281

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGGTCCGAGTTAACTTTCTTACCGAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGTTGTGTCTGCTAATCGGAGACGATACTGATTTCTTATAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTGTAATTTTCTTTCCAGATCTGATGTGTTTTTGTTGTCTTCCCTTTCCGTTCTTTGAATTGCATCGATTCTCGTACTGTTTTCTTTCACGTAATCTATTCTGAATCAGAATGGCGTGACGGCTTAGGAAACATAAAACTTGTAATTTGTTGTATTGAACTGTCGTAGCAATCGGAAATTAGTGCTACTTCAGCTTATGAGCATGAAATTAGTCTCCAATTTGATATGACGAATAAAATTCTTCAATATGTCGTGATTATTGTTAAATGTTTGCAGATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTGTAGGTATTTTCGTGTGTTGACTGCGTGGTAGTCTACTGGCATATTGTCTTCTGCATGCTCACTGGATTGTTAGAATTTCGACTGCAGATCCAAATTAAAAGCGATTTTTAGACTTATTTTTATGAGTTCTTCAATAGGCAGTCGTGTTCCCTACTTTCTGCATCGTAGTTAGTATGCAATCTACGATATCTTCGTGCATTTGTTCCCTGCATTCCACCAGGTTTTGTTATAGGCTATTTGCCGTGTCTCTCAGATGAGGCATTGATTACGATTTATGCTAAAATGATTCTTTGATACCATTTTAGGTTTTTTTTTTTAATATGCAGTAATGACCTTTACCTACTGTTTATGGCGATACAAAAGTATGATATCTTTTTTAATCTTTCCTGCATTCCACCAGCTTGTGCAGGACACAGGCTTTGTGTGTCGGAATAGGAGAATGAGTGCAATGTATGCTGAAATAATTGTTATAACAAACGTAATAGTTTTATGCATCAAAATATTGGATTATGTGTTTATCGGTGTCATTTATTGACTTCTCTTCTCAACGAGAGATTTGGATTATATGGTTTCTTTCTCATATATTTTAATTTTTACATTTCTTTTGGTGTCATTTTCCCTTGGCTGCAGAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGTAAGTTTGTTATTCTTTCCCTATCCCTTCTCAGGATTTAATGAATCAACTGCTCGATTTTCTCTACCTTATTGCACCGCAAATCATATATTTTAAGACCAGTGGTTAAGTTTTTCTTTTAAAAGCCTCATGATCTGTTATATGGTTTTCAATTGGAATTAGGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGGTATTTCCTTTACTATGCAACAATCCTTTTCAAATTTTATGCTTTAAATGTTTCTTGAGTGGACTTTCTTTACTTGTCTCTTGAAGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGTGAGTATTTTTTTGTTATTTCTGTACAGCTCCAGTCATTCTTCTTTGTTATCTTCAATTCGGTTAAACTTATCAGAGAATTCACATGAAATTTTTTAATGTGCATAACGCGGAGCTGTTGACTGGTATTTTAAATTTTTTATGCATCAGCTTTTGATGCCTGCTTAGTTTTGACTTCTGGAATTGGAATGAGCAAGGAGCCTTTTTTCATGTGGTTTTCTCTATCTCATGTACAAAGTAAATATTAGAAAGACAATCCTTCATTTTTCTCGACCATTCATTGCCTTCTCCAAATTTTTAGGTGAATAAAAGATACACCCTTCATAATAACTGAGTACGGCTTTGGTGGCCCCTGCTTGGACTTAAATGATTTGGTTTGCATGTAGGAGTAAGTCAGTAGTTGGTTAGTTTACCTTGATAGAGCAGTTGTCAGCACAAGGTGTCAGTGATTGAGGCAGACTATTACTTCTTAAAACTTAGGTGTGGGAGTCAATAGAAAAGCATTGGGAGAATTCAAGAATTCCATGATTTCATTGTAAACTTTCTTAACTAGTAGAAATGTTTTGTGAGCCTTATTGTTTTACTCATTCATTGACGACATGAGAACTACATGTTTGGAGAAAATGAGAGAGAAGACAACTTCTGAGAATTGATATTCCTTGACTTGAATTTGGTGACTACAATCTTCTCTGATGCATCTTGTTAGATGGTATCATGCTTTTAGCCTATAATTCTAAAATTGGCAAGCATCTCATCATATTAGGATAAGGGAAATTATCTAACAACTATAACTCATGCTAAATGTATATATATTTTTTGGGTCGATGTTTTCATAATGAATCATTTTATGTTGACTACAGGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGGTAAGGTTCTGCATATTTATTGGTTCTGTATTCTGTTAGGGCATATTTATTGGTTCTGCATATTTATTGATTATTGGTCTGTAAGGTTCTACAGGAGCTAGAAAAAACTAAGGGTTGAATTTTTTTTAAATTTTATTTTCTGATTGTAAAAGTTCTATACCCTTTGTTTGTTAATAATAAAGGTGAATTCTATCATCTTCTATGGGTTTTCTTTATTGTTTGTTCTTCTATATGCGTATATGGTTTTATGTGTGTGTTTTTAATATGGTTTGCTCTCCCGTCATTGTGTTCTATCTACACAAAGATATATAATGGATGATTATAGGAGTTGTATAAATTACCGTCTCCATATTTCAATTTAAGACTTCTTTTAGTTATTGATATTTTAAGTGACTGATGTCTATTTGCTCCAAAACTTTATAATTTTCTTCTATAGAAATAGCAAATTAAGTTGATAAAGGCTTTTTATCTTTGTGTTCAATTAAAGGAGACATGGTTGGTATCTCCCCTGACGGGGTTGGGAACTGTCCTTCCCTTCTAACACACAGATAAAGTTCATATCTATTTTGTATATTTATTTTGTTTGATTGTTTTCTATTTTCTCAACCTATTACATTTTCCTTGGACTCATCCAGCTTCAACCTCTGGTGACAGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTTAGTAAAAAAGGACGCAAGTTATTTGCTTGAGTTTGCTTGTGAATTGAGACTCATTCTTGATTCTATTTTAAAAGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGTTGAAATAACTTCCCTCCTGTATGTTAACATTCTTTATGATTTTTGTTATTGAAAAGGACTGTTTAATTTTCAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGTGTGTGTAGTGTAGCATAGAAAAAGGTCATTCGTAAATGGTTGTCATTTTTGGTTGGGTTGGGTTGGGTTTGGTCGTATAATCTCCATTGCTTTAATCATTCCTCCATTTATGACATTTTCAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

mRNA sequence

CAGGTCCGAGTTAACTTTCTTACCGAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGTTGTGTCTGCTAATCGGAGACGATACTGATTTCTTATAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

Coding sequence (CDS)

ATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

Protein sequence

MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDFKEATKRLEWGLKKARHFL

Homology

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BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot
Match: AP4M_ARATH (AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 3.2e-182
Identity = 318/374 (85.03%), Postives = 338/374 (90.37%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKK 375
           FKE+ K LEW LKK
Sbjct: 362 FKESNKMLEWNLKK 374

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BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot
Match: AP4M1_BOVIN (AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.3e-60
Identity = 131/357 (36.69%), Postives = 213/357 (59.66%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V + D  ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHDDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTSENISPFSLLELLSRLATLLGDYCGSLGEATISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTEVL++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEVLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVYLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  V + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLPPKSQALNVRLHLPLPRGVVSLSQEL 347

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BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot
Match: AP4M1_HUMAN (AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-60
Identity = 130/357 (36.41%), Postives = 213/357 (59.66%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V +  G ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHHGRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  V TT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +  S   A  V + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQEL 347

[Close]

BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot
Match: AP4M1_MOUSE (AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-59
Identity = 130/357 (36.41%), Postives = 211/357 (59.10%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+        G++P V      ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPG---GESPVVMYHGDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G LNE ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTLENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q NK  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQNKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    EI + L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  + + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPRGVISLSQEL 347

[Close]

BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot
Match: AP4M1_RAT (AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-59
Identity = 129/357 (36.13%), Postives = 212/357 (59.38%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+        G++P V   D  ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPG---GESPVVMYHDDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G LNE ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTSENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTST++L++++  E  V     L  L    +F    Q N+  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTDMLRNFIQTEAAVSKPFSLFDLSSVGLFGAETQQNRVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L  + EI + L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSSSEICIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILHLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  + + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPRGVVSLSQEL 347

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL
Match: A0A0A0LGF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860300 PE=3 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 1.6e-204
Identity = 363/374 (97.06%), Postives = 368/374 (98.40%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEW LKK
Sbjct: 361 FKEANKRLEWSLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL
Match: F6H1J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13000 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 1.9e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL
Match: A0A061FCH7_THECC (Clathrin adaptor complexes medium subunit family protein isoform 1 OS=Theobroma cacao GN=TCM_034244 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 1.4e-189
Identity = 337/374 (90.11%), Postives = 352/374 (94.12%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDG+ +APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVAKGSAEIFFRKVKFWKEDGQEEAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTR+N SPSLVLELLQRIARVIKDYLGVL+EDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGVLSEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARL PLGPA+IF+QG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLQPLGPAAIFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGG 
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGG 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SVYDYRSSSGAGPVILDDCNFHESVRLDSFDMDRTLALVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            IN LIEEAG LKAEVILKVRAEF S+ITANTV+VQMPLP +TTR SFELEPGAVG  TD
Sbjct: 301 HINCLIEEAGHLKAEVILKVRAEFPSNITANTVVVQMPLPKYTTRASFELEPGAVGQRTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA K+LEWGLKK
Sbjct: 361 FKEANKKLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL
Match: A0A0D2S6L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G230200 PE=3 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 9.4e-189
Identity = 335/374 (89.57%), Postives = 351/374 (93.85%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDG+ +APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVAKGSAEIFFRKVKFWKEDGQEEAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTR+N SPSLVLELLQRIARVIKDYLGVL+EDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGVLSEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARL PLGPA+IF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLQPLGPAAIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDLSIGRGG 
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGG 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           +IYDY SSSG G VILDDCNFHESV LD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 TIYDYRSSSGSGAVILDDCNFHESVRLDSFDMDRTLSLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RIN LIEEAG LKAEVI+KVRAEF S+ITANT+ VQMPLP +TTR SFELEPGAVG  TD
Sbjct: 301 RINCLIEEAGQLKAEVIIKVRAEFPSNITANTIAVQMPLPKYTTRASFELEPGAVGQRTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA K+LEWGLKK
Sbjct: 361 FKEANKKLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL
Match: W9SC15_9ROSA (AP-4 complex subunit mu-1 OS=Morus notabilis GN=L484_021921 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 329/376 (87.50%), Postives = 351/376 (93.35%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVQKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLF ATTR N SPS VLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFAATTRANVSPSFVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEP+VVDA+R+PPLGPA+IF QG KRMPGTA+TKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPLVVDASRMPPLGPAAIFRQGTKRMPGTAITKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVD+IEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIR+ALNEDLSIG+GGR
Sbjct: 181 RKREEIFVDVIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRVALNEDLSIGQGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SI+DYSSS G GTV LDDCNFHESV LD+FD DRTL ++PP+GEF VMNYR+TQEFKPPF
Sbjct: 241 SIHDYSSSFGAGTVTLDDCNFHESVRLDSFDIDRTLTMIPPDGEFSVMNYRITQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RIN L+EEAG LKAEVI+KVRAEF SS++ANT++VQMPLP +T R SFELEPG VGNTTD
Sbjct: 301 RINTLVEEAGLLKAEVIIKVRAEFPSSVSANTILVQMPLPAYTIRASFELEPGTVGNTTD 360

Query: 361 FKEATKRLEWGLKKAR 377
           FKEA KRLEWGLKKAR
Sbjct: 361 FKEANKRLEWGLKKAR 376

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10
Match: AT4G24550.2 (AT4G24550.2 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 639.0 bits (1647), Expect = 1.8e-183
Identity = 318/374 (85.03%), Postives = 338/374 (90.37%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKK 375
           FKE+ K LEW LKK
Sbjct: 362 FKESNKMLEWNLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10
Match: AT1G60780.1 (AT1G60780.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-54
Identity = 120/372 (32.26%), Postives = 205/372 (55.11%), Query Frame = 1


Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT +V     G + 
Sbjct: 126 YPQYTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNAVSWRSEGIQY 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YLTG PE +L LN+ + +   GR+
Sbjct: 186 KKNEVFLDVIENVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRA 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
                  + G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 -------TKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDF 362
           + A IE     + E+++K R++F    TA  V +++P+PT  +  +     G+     + 
Sbjct: 306 VEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPE- 349

Query: 363 KEATKRLEWGLK 374
           K+A   L W +K
Sbjct: 366 KDA---LVWKIK 349

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10
Match: AT1G10730.1 (AT1G10730.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-54
Identity = 114/340 (33.53%), Postives = 193/340 (56.76%), Query Frame = 1


Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT SV     G + 
Sbjct: 126 YPQFTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNSVSWRSEGLKF 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YL+G PE +L LN+ + +   GR+
Sbjct: 186 KKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRA 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
           I        G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 I-------KGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPT 342
           + A IE     + E+++K R++F     A +V +++P+PT
Sbjct: 306 VEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPT 321

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10
Match: AT5G46630.2 (AT5G46630.2 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-50
Identity = 120/378 (31.75%), Postives = 197/378 (52.12%), Query Frame = 1


Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  + L+ RGD ++ R YR +V     + F   +   KE G     PV  + G ++ +++
Sbjct: 6   SAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTKELGNC---PVRQIGGCSFVYMR 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLG-VLNEDSLRKNFVLVYELLDEVIDF 122
           +  +  V     NA+ +   + +     + K Y G   +ED++R NFVL+YELLDE++DF
Sbjct: 66  ISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDF 125

Query: 123 GYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVG-----N 182
           GY Q  S E+LK Y+  E            G  S F    K  P    T  V G      
Sbjct: 126 GYPQNLSPEILKLYITQE------------GVRSPFSSKPKDKPVPNATLQVTGAVGWRR 185

Query: 183 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 242
           E     + E+F+DI+E +++  SS G +L  ++ G + MK +L+G P+++L LN+   IG
Sbjct: 186 EGLAYKKNEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLND--KIG 245

Query: 243 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 302
               S      +  G T+ LDD  FH+ V+L  F+S++T+  VPP+GEF +M YR+T+  
Sbjct: 246 LEKESEMKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGV 305

Query: 303 KPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVG 362
             PFR+   I+E G  + EV +KV++ F + + A  V+V++P+P  T + +F++  G   
Sbjct: 306 NLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG--- 362

Query: 363 NTTDFKEATKRLEWGLKK 375
               +  +   L W ++K
Sbjct: 366 -RAKYNPSIDCLVWKIRK 362

[Close]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10
Match: AT1G56590.1 (AT1G56590.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 93/339 (27.43%), Postives = 162/339 (47.79%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           M+   F++S  G+ ++ +   G     S   +F   ++  +     A PV        F 
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWD-QYISQGDSFKALPVIASPTHYLFQ 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           +   G+ F+A +++   P + +E L R+A V+ +YLG LNED ++ NF++VYELLDE+ID
Sbjct: 61  IVRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
            G+  TT   +LK  +   P +V        G AS     +  +P  A +          
Sbjct: 121 NGFPLTTEPSILKEMI-APPNLVSKMLSVVTGNAS---NVSDTLPSGAGSCVPWRPTDPK 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
            +  E++VD++E++    +  G ++  EI G +QM S LTG P++ L             
Sbjct: 181 YSSNEVYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTL------------- 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
                   S     IL+D  FH  V    ++S + L  VPP+GEF +M+YR+ +    P 
Sbjct: 241 --------SFANPSILEDMRFHPCVRYRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPV 300

Query: 301 RINALI-EEAGPLKAEVILKVRAEFASSITANTVMVQMP 339
            +   I  ++G  +  V++ +R++   +I + T+  Q+P
Sbjct: 301 YVKPQITSDSGTCRISVLVGIRSDPGKTIESITLSFQLP 313

[Close]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr
Match: gi|659133044|ref|XP_008466524.1| (PREDICTED: AP-4 complex subunit mu [Cucumis melo])

HSP 1 Score: 724.9 bits (1870), Expect = 7.1e-206
Identity = 365/374 (97.59%), Postives = 370/374 (98.93%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFD+DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr
Match: gi|778686673|ref|XP_004147850.2| (PREDICTED: AP-4 complex subunit mu [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 2.3e-204
Identity = 363/374 (97.06%), Postives = 368/374 (98.40%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEW LKK
Sbjct: 361 FKEANKRLEWSLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr
Match: gi|225458187|ref|XP_002281307.1| (PREDICTED: AP-4 complex subunit mu isoform X1 [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr
Match: gi|731429658|ref|XP_010664723.1| (PREDICTED: AP-4 complex subunit mu isoform X2 [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr
Match: gi|1009135362|ref|XP_015884948.1| (PREDICTED: AP-4 complex subunit mu-like [Ziziphus jujuba])

HSP 1 Score: 684.9 bits (1766), Expect = 8.1e-194
Identity = 337/374 (90.11%), Postives = 358/374 (95.72%), Query Frame = 1


Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDGEGDAPP+FN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVQKGSAEIFFRKVKFWKEDGEGDAPPIFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLF ATTR+N SPSLVLELLQRIARV+KDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFAATTRVNVSPSLVLELLQRIARVVKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKS +FNEPI+VDA RLPPLGPA+IF+QG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSSIFNEPIMVDAGRLPPLGPAAIFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALN+DLSIGR GR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRSGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SSSG G V+LDDCNFHESVHLD+FD DRTL L+PP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSSGSGPVVLDDCNFHESVHLDSFDIDRTLTLIPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVI+KV AEFASS+ ANT++VQMPLPT+TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVIIKVFAEFASSVIANTILVQMPLPTYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           +KEA KRLEWGLKK
Sbjct: 361 YKEANKRLEWGLKK 374

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g07820.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AP4M_ARATH	3.2e-182	85.03	AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1	[more]
AP4M1_BOVIN	5.3e-60	36.69	AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1	[more]
AP4M1_HUMAN	6.9e-60	36.41	AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2	[more]
AP4M1_MOUSE	7.6e-59	36.41	AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1	[more]
AP4M1_RAT	7.6e-59	36.13	AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1	[more]

BLAST of Cp4.1LG02g07820.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LGF2_CUCSA	1.6e-204	97.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860300 PE=3 SV=1	[more]
F6H1J1_VITVI	1.9e-197	93.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13000 PE=3 SV=...	[more]
A0A061FCH7_THECC	1.4e-189	90.11	Clathrin adaptor complexes medium subunit family protein isoform 1 OS=Theobroma ...	[more]
A0A0D2S6L8_GOSRA	9.4e-189	89.57	Uncharacterized protein OS=Gossypium raimondii GN=B456_009G230200 PE=3 SV=1	[more]
W9SC15_9ROSA	1.2e-188	87.50	AP-4 complex subunit mu-1 OS=Morus notabilis GN=L484_021921 PE=3 SV=1	[more]

BLAST of Cp4.1LG02g07820.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G24550.2	1.8e-183	85.03	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G60780.1	2.1e-54	32.26	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G10730.1	3.5e-54	33.53	Clathrin adaptor complexes medium subunit family protein	[more]
AT5G46630.2	1.4e-50	31.75	Clathrin adaptor complexes medium subunit family protein	[more]
AT1G56590.1	1.4e-29	27.43	Clathrin adaptor complexes medium subunit family protein	[more]

BLAST of Cp4.1LG02g07820.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659133044\|ref\|XP_008466524.1\|	7.1e-206	97.59	PREDICTED: AP-4 complex subunit mu [Cucumis melo]	[more]
gi\|778686673\|ref\|XP_004147850.2\|	2.3e-204	97.06	PREDICTED: AP-4 complex subunit mu [Cucumis sativus]	[more]
gi\|225458187\|ref\|XP_002281307.1\|	2.7e-197	93.05	PREDICTED: AP-4 complex subunit mu isoform X1 [Vitis vinifera]	[more]
gi\|731429658\|ref\|XP_010664723.1\|	2.7e-197	93.05	PREDICTED: AP-4 complex subunit mu isoform X2 [Vitis vinifera]	[more]
gi\|1009135362\|ref\|XP_015884948.1\|	8.1e-194	90.11	PREDICTED: AP-4 complex subunit mu-like [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0006810	transport
GO:0016192	vesicle-mediated transport
GO:0006886	intracellular protein transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0030131	clathrin adaptor complex

Vocabulary: **INTERPRO**
Term	Definition
IPR022775	AP_mu_sigma_su
IPR011012	Longin-like_dom_sf
IPR001392	Clathrin_mu

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0006810	transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0006623	protein targeting to vacuole
cellular_component	GO:0030131	clathrin adaptor complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g07820	Cp4.1LG02g07820	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07820.1	Cp4.1LG02g07820.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07820.1:five_prime_utr:001	Cp4.1LG02g07820.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g07820.1:cds:010	Cp4.1LG02g07820.1:cds:010	CDS
Cp4.1LG02g07820.1:cds:009	Cp4.1LG02g07820.1:cds:009	CDS
Cp4.1LG02g07820.1:cds:008	Cp4.1LG02g07820.1:cds:008	CDS
Cp4.1LG02g07820.1:cds:007	Cp4.1LG02g07820.1:cds:007	CDS
Cp4.1LG02g07820.1:cds:006	Cp4.1LG02g07820.1:cds:006	CDS
Cp4.1LG02g07820.1:cds:005	Cp4.1LG02g07820.1:cds:005	CDS
Cp4.1LG02g07820.1:cds:004	Cp4.1LG02g07820.1:cds:004	CDS
Cp4.1LG02g07820.1:cds:003	Cp4.1LG02g07820.1:cds:003	CDS
Cp4.1LG02g07820.1:cds:002	Cp4.1LG02g07820.1:cds:002	CDS
Cp4.1LG02g07820.1:cds:001	Cp4.1LG02g07820.1:cds:001	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001392	Clathrin adaptor, mu subunit	PRINTS	PR00314	CLATHRINADPT	coord: 325..340 score: 3.0E-30coord: 12..32 score: 3.0E-30coord: 101..128 score: 3.0E-30coord: 256..283 score: 3.0
IPR001392	Clathrin adaptor, mu subunit	PIR	PIRSF005992	AP_complex_mu	coord: 1..377 score: 1.3
IPR011012	Longin-like domain	unknown	SSF64356	SNARE-like	coord: 1..141 score: 3.52
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 1..132 score: 1.
None	No IPR available	GENE3D	G3DSA:2.60.40.1170		coord: 182..341 score: 1.6
None	No IPR available	GENE3D	G3DSA:3.30.450.60		coord: 1..140 score: 1.2
None	No IPR available	PANTHER	PTHR10529	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED	coord: 165..376 score: 1.4E-126coord: 1..149 score: 1.4E
None	No IPR available	PANTHER	PTHR10529:SF242	PROTEIN M03E7.4	coord: 165..376 score: 1.4E-126coord: 1..149 score: 1.4E