Cp4.1LG02g07820 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g07820
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionAP-4 complex subunit mu
LocationCp4.1LG02 : 527833 .. 532056 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGGTCCGAGTTAACTTTCTTACCGAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGTTGTGTCTGCTAATCGGAGACGATACTGATTTCTTATAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTGTAATTTTCTTTCCAGATCTGATGTGTTTTTGTTGTCTTCCCTTTCCGTTCTTTGAATTGCATCGATTCTCGTACTGTTTTCTTTCACGTAATCTATTCTGAATCAGAATGGCGTGACGGCTTAGGAAACATAAAACTTGTAATTTGTTGTATTGAACTGTCGTAGCAATCGGAAATTAGTGCTACTTCAGCTTATGAGCATGAAATTAGTCTCCAATTTGATATGACGAATAAAATTCTTCAATATGTCGTGATTATTGTTAAATGTTTGCAGATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTGTAGGTATTTTCGTGTGTTGACTGCGTGGTAGTCTACTGGCATATTGTCTTCTGCATGCTCACTGGATTGTTAGAATTTCGACTGCAGATCCAAATTAAAAGCGATTTTTAGACTTATTTTTATGAGTTCTTCAATAGGCAGTCGTGTTCCCTACTTTCTGCATCGTAGTTAGTATGCAATCTACGATATCTTCGTGCATTTGTTCCCTGCATTCCACCAGGTTTTGTTATAGGCTATTTGCCGTGTCTCTCAGATGAGGCATTGATTACGATTTATGCTAAAATGATTCTTTGATACCATTTTAGGTTTTTTTTTTTAATATGCAGTAATGACCTTTACCTACTGTTTATGGCGATACAAAAGTATGATATCTTTTTTAATCTTTCCTGCATTCCACCAGCTTGTGCAGGACACAGGCTTTGTGTGTCGGAATAGGAGAATGAGTGCAATGTATGCTGAAATAATTGTTATAACAAACGTAATAGTTTTATGCATCAAAATATTGGATTATGTGTTTATCGGTGTCATTTATTGACTTCTCTTCTCAACGAGAGATTTGGATTATATGGTTTCTTTCTCATATATTTTAATTTTTACATTTCTTTTGGTGTCATTTTCCCTTGGCTGCAGAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGTAAGTTTGTTATTCTTTCCCTATCCCTTCTCAGGATTTAATGAATCAACTGCTCGATTTTCTCTACCTTATTGCACCGCAAATCATATATTTTAAGACCAGTGGTTAAGTTTTTCTTTTAAAAGCCTCATGATCTGTTATATGGTTTTCAATTGGAATTAGGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGGTATTTCCTTTACTATGCAACAATCCTTTTCAAATTTTATGCTTTAAATGTTTCTTGAGTGGACTTTCTTTACTTGTCTCTTGAAGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGTGAGTATTTTTTTGTTATTTCTGTACAGCTCCAGTCATTCTTCTTTGTTATCTTCAATTCGGTTAAACTTATCAGAGAATTCACATGAAATTTTTTAATGTGCATAACGCGGAGCTGTTGACTGGTATTTTAAATTTTTTATGCATCAGCTTTTGATGCCTGCTTAGTTTTGACTTCTGGAATTGGAATGAGCAAGGAGCCTTTTTTCATGTGGTTTTCTCTATCTCATGTACAAAGTAAATATTAGAAAGACAATCCTTCATTTTTCTCGACCATTCATTGCCTTCTCCAAATTTTTAGGTGAATAAAAGATACACCCTTCATAATAACTGAGTACGGCTTTGGTGGCCCCTGCTTGGACTTAAATGATTTGGTTTGCATGTAGGAGTAAGTCAGTAGTTGGTTAGTTTACCTTGATAGAGCAGTTGTCAGCACAAGGTGTCAGTGATTGAGGCAGACTATTACTTCTTAAAACTTAGGTGTGGGAGTCAATAGAAAAGCATTGGGAGAATTCAAGAATTCCATGATTTCATTGTAAACTTTCTTAACTAGTAGAAATGTTTTGTGAGCCTTATTGTTTTACTCATTCATTGACGACATGAGAACTACATGTTTGGAGAAAATGAGAGAGAAGACAACTTCTGAGAATTGATATTCCTTGACTTGAATTTGGTGACTACAATCTTCTCTGATGCATCTTGTTAGATGGTATCATGCTTTTAGCCTATAATTCTAAAATTGGCAAGCATCTCATCATATTAGGATAAGGGAAATTATCTAACAACTATAACTCATGCTAAATGTATATATATTTTTTGGGTCGATGTTTTCATAATGAATCATTTTATGTTGACTACAGGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGGTAAGGTTCTGCATATTTATTGGTTCTGTATTCTGTTAGGGCATATTTATTGGTTCTGCATATTTATTGATTATTGGTCTGTAAGGTTCTACAGGAGCTAGAAAAAACTAAGGGTTGAATTTTTTTTAAATTTTATTTTCTGATTGTAAAAGTTCTATACCCTTTGTTTGTTAATAATAAAGGTGAATTCTATCATCTTCTATGGGTTTTCTTTATTGTTTGTTCTTCTATATGCGTATATGGTTTTATGTGTGTGTTTTTAATATGGTTTGCTCTCCCGTCATTGTGTTCTATCTACACAAAGATATATAATGGATGATTATAGGAGTTGTATAAATTACCGTCTCCATATTTCAATTTAAGACTTCTTTTAGTTATTGATATTTTAAGTGACTGATGTCTATTTGCTCCAAAACTTTATAATTTTCTTCTATAGAAATAGCAAATTAAGTTGATAAAGGCTTTTTATCTTTGTGTTCAATTAAAGGAGACATGGTTGGTATCTCCCCTGACGGGGTTGGGAACTGTCCTTCCCTTCTAACACACAGATAAAGTTCATATCTATTTTGTATATTTATTTTGTTTGATTGTTTTCTATTTTCTCAACCTATTACATTTTCCTTGGACTCATCCAGCTTCAACCTCTGGTGACAGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTTAGTAAAAAAGGACGCAAGTTATTTGCTTGAGTTTGCTTGTGAATTGAGACTCATTCTTGATTCTATTTTAAAAGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGTTGAAATAACTTCCCTCCTGTATGTTAACATTCTTTATGATTTTTGTTATTGAAAAGGACTGTTTAATTTTCAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGGTGTGTGTAGTGTAGCATAGAAAAAGGTCATTCGTAAATGGTTGTCATTTTTGGTTGGGTTGGGTTGGGTTTGGTCGTATAATCTCCATTGCTTTAATCATTCCTCCATTTATGACATTTTCAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

mRNA sequence

CAGGTCCGAGTTAACTTTCTTACCGAGGGAGTTCTTTGGGGAGTCTCCCATCCGATTGAGTTCCTTCGCGCGCTGTTGTGTCTGCTAATCGGAGACGATACTGATTTCTTATAAGCTCGATACGGTTGCTCAGGTTTGGCAATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

Coding sequence (CDS)

ATGATTTCGCAGTTCTTCGTGCTCTCGCAGAGAGGCGACAACATTGTATTCCGAGATTATCGTGGCGAAGTACCGAAAGGAAGTGCTGAGATCTTTTTCCGAAAAGTAAAATTCTGGAAGGAAGACGGAGAAGGAGATGCGCCACCTGTCTTTAATTTGGATGGCGTAAACTACTTTCACGTGAAGGTTGTAGGACTCTTATTTGTTGCGACAACAAGGATTAATGCATCACCTTCTCTTGTTCTTGAACTTCTTCAAAGAATTGCACGTGTTATCAAAGATTACCTTGGGGTTCTCAATGAAGATTCCCTCAGGAAAAACTTTGTTCTTGTGTATGAGTTGCTGGATGAAGTTATTGATTTTGGTTATGTACAAACAACATCAACTGAGGTTTTGAAGTCATATGTATTTAATGAGCCAATTGTGGTTGATGCTGCACGTTTGCCTCCCCTTGGTCCGGCTTCCATTTTTGTGCAAGGGAACAAACGGATGCCAGGTACGGCTGTCACCAAGTCTGTGGTTGGAAATGAGCCTGGAGGTAGAAATAGAGAGGAGATTTTTGTTGACATAATCGAGAAGATTAGTGTTACATTCAGCTCAAGTGGTTATATACTTACTTCAGAGATTGATGGTACCATTCAAATGAAGAGCTATCTTACCGGTAACCCAGAAATTCGACTTGCTCTTAATGAGGACTTGAGCATTGGAAGAGGTGGAAGGTCAATCTACGATTATAGCAGTTCATCTGGTGGAGGGACAGTCATCCTTGATGATTGTAATTTTCATGAATCTGTGCATCTTGATAATTTTGATTCTGACAGAACTTTGGTCTTGGTACCACCAGAAGGTGAATTTCCTGTCATGAATTATCGAATGACTCAGGAATTCAAGCCTCCCTTTCGTATTAATGCCTTAATTGAAGAAGCAGGCCCCCTTAAGGCTGAAGTAATTCTTAAAGTTCGTGCTGAATTTGCCTCAAGCATCACAGCAAACACGGTTATGGTTCAGATGCCACTGCCAACTTTCACGACAAGAGTCAGCTTTGAGTTGGAACCTGGAGCAGTAGGAAATACAACTGATTTTAAAGAAGCGACCAAGAGGCTTGAATGGGGTTTGAAGAAGGCAAGACACTTCCTATAA

Protein sequence

MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDFKEATKRLEWGLKKARHFL
Homology
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BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match: AP4M_ARATH (AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1)

HSP 1 Score: 639.0 bits (1647), Expect = 3.2e-182
Identity = 318/374 (85.03%), Postives = 338/374 (90.37%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKK 375
           FKE+ K LEW LKK
Sbjct: 362 FKESNKMLEWNLKK 374

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BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match: AP4M1_BOVIN (AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 5.3e-60
Identity = 131/357 (36.69%), Postives = 213/357 (59.66%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V + D  ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHDDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTSENISPFSLLELLSRLATLLGDYCGSLGEATISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTEVL++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEVLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVYLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  V + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLPPKSQALNVRLHLPLPRGVVSLSQEL 347

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BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match: AP4M1_HUMAN (AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2)

HSP 1 Score: 232.6 bits (592), Expect = 6.9e-60
Identity = 130/357 (36.41%), Postives = 213/357 (59.66%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+     D   ++P V +  G ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPGD---ESPVVMHHHGRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  V TT  N SP  +LELL R+A ++ DY G L E ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVVTTSENVSPFSLLELLSRLATLLGDYCGSLGEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q +K  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQSKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    E+R+ L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEMRIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +  S   A  V + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDRGSGRLQVYLKLRCDLLSKSQALNVRLHLPLPRGVVSLSQEL 347

[Close]
BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match: AP4M1_MOUSE (AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-59
Identity = 130/357 (36.41%), Postives = 211/357 (59.10%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+        G++P V      ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPG---GESPVVMYHGDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G LNE ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTLENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTSTE+L++++  E +V     L  L    +F    Q NK  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTEMLRNFIQTEAVVSKPFSLFDLSSVGLFGAETQQNKVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L    EI + L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSGSEICIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILRLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  + + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPRGVISLSQEL 347

[Close]
BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match: AP4M1_RAT (AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.6e-59
Identity = 129/357 (36.13%), Postives = 212/357 (59.38%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVP-KGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYF 60
           MISQFF+LS +GD ++++D+RG+   +  AE+F+RK+        G++P V   D  ++ 
Sbjct: 1   MISQFFILSSKGDPLIYKDFRGDSGGRDVAELFYRKLTGLPG---GESPVVMYHDDRHFI 60

Query: 61  HVKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVI 120
           H++  GL  VATT  N SP  +LELL R+A ++ DY G LNE ++ +N  LVYELLDEV+
Sbjct: 61  HIRHSGLYLVATTSENVSPFSLLELLSRLATLLGDYCGSLNEGTISRNVALVYELLDEVL 120

Query: 121 DFGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIF---VQGNKRMPGTAVTKSVVGN 180
           D+GYVQTTST++L++++  E  V     L  L    +F    Q N+  P +A ++ V+ +
Sbjct: 121 DYGYVQTTSTDMLRNFIQTEAAVSKPFSLFDLSSVGLFGAETQQNRVAPSSAASRPVLSS 180

Query: 181 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 240
                 + E+F+D++E++SV  +S+G +L  ++ G I++KS+L  + EI + L E+  +G
Sbjct: 181 RSDQSQKNEVFLDVVERLSVLIASNGSLLKVDVQGEIRLKSFLPSSSEICIGLTEEFCVG 240

Query: 241 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 300
           +     Y       G  + +D+ +FH SV+LD F+S R L L PP+GE  VM Y+++ + 
Sbjct: 241 KSELRGY-------GPGIRVDEVSFHSSVNLDEFESHRILHLQPPQGELTVMRYQLSDDL 300

Query: 301 KP--PFRINALIE-EAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFEL 351
               PFR+   ++ + G  + +V LK+R +      A  + + +PLP     +S EL
Sbjct: 301 PSPLPFRLFPSVQWDQGSGRLQVYLKLRCDLPPKSQALNIHLHLPLPRGVVSLSQEL 347

[Close]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match: A0A0A0LGF2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860300 PE=3 SV=1)

HSP 1 Score: 719.9 bits (1857), Expect = 1.6e-204
Identity = 363/374 (97.06%), Postives = 368/374 (98.40%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEW LKK
Sbjct: 361 FKEANKRLEWSLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match: F6H1J1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13000 PE=3 SV=1)

HSP 1 Score: 696.4 bits (1796), Expect = 1.9e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match: A0A061FCH7_THECC (Clathrin adaptor complexes medium subunit family protein isoform 1 OS=Theobroma cacao GN=TCM_034244 PE=3 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 1.4e-189
Identity = 337/374 (90.11%), Postives = 352/374 (94.12%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDG+ +APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVAKGSAEIFFRKVKFWKEDGQEEAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTR+N SPSLVLELLQRIARVIKDYLGVL+EDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGVLSEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARL PLGPA+IF+QG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLQPLGPAAIFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGG 
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGG 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SVYDYRSSSGAGPVILDDCNFHESVRLDSFDMDRTLALVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            IN LIEEAG LKAEVILKVRAEF S+ITANTV+VQMPLP +TTR SFELEPGAVG  TD
Sbjct: 301 HINCLIEEAGHLKAEVILKVRAEFPSNITANTVVVQMPLPKYTTRASFELEPGAVGQRTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA K+LEWGLKK
Sbjct: 361 FKEANKKLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match: A0A0D2S6L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G230200 PE=3 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 9.4e-189
Identity = 335/374 (89.57%), Postives = 351/374 (93.85%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDG+ +APPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVAKGSAEIFFRKVKFWKEDGQEEAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTR+N SPSLVLELLQRIARVIKDYLGVL+EDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGVLSEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARL PLGPA+IF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLQPLGPAAIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDLSIGRGG 
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLSIGRGGG 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           +IYDY SSSG G VILDDCNFHESV LD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 TIYDYRSSSGSGAVILDDCNFHESVRLDSFDMDRTLSLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RIN LIEEAG LKAEVI+KVRAEF S+ITANT+ VQMPLP +TTR SFELEPGAVG  TD
Sbjct: 301 RINCLIEEAGQLKAEVIIKVRAEFPSNITANTIAVQMPLPKYTTRASFELEPGAVGQRTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA K+LEWGLKK
Sbjct: 361 FKEANKKLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match: W9SC15_9ROSA (AP-4 complex subunit mu-1 OS=Morus notabilis GN=L484_021921 PE=3 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 1.2e-188
Identity = 329/376 (87.50%), Postives = 351/376 (93.35%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVQKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLF ATTR N SPS VLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFAATTRANVSPSFVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEP+VVDA+R+PPLGPA+IF QG KRMPGTA+TKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPLVVDASRMPPLGPAAIFRQGTKRMPGTAITKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVD+IEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIR+ALNEDLSIG+GGR
Sbjct: 181 RKREEIFVDVIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRVALNEDLSIGQGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SI+DYSSS G GTV LDDCNFHESV LD+FD DRTL ++PP+GEF VMNYR+TQEFKPPF
Sbjct: 241 SIHDYSSSFGAGTVTLDDCNFHESVRLDSFDIDRTLTMIPPDGEFSVMNYRITQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RIN L+EEAG LKAEVI+KVRAEF SS++ANT++VQMPLP +T R SFELEPG VGNTTD
Sbjct: 301 RINTLVEEAGLLKAEVIIKVRAEFPSSVSANTILVQMPLPAYTIRASFELEPGTVGNTTD 360

Query: 361 FKEATKRLEWGLKKAR 377
           FKEA KRLEWGLKKAR
Sbjct: 361 FKEANKRLEWGLKKAR 376

[Close]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match: AT4G24550.2 (AT4G24550.2 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 639.0 bits (1647), Expect = 1.8e-183
Identity = 318/374 (85.03%), Postives = 338/374 (90.37%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYR EVPKGS E FFRKVKFWKEDG  +APP+FN+DGVNYFH
Sbjct: 2   MISQFFVLSQRGDNIVFRDYRAEVPKGSTETFFRKVKFWKEDGNAEAPPIFNVDGVNYFH 61

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGL FVATTR+N SPSLVLELLQRIARVIKDYLGVLNEDS RKNFVLVYELLDEVID
Sbjct: 62  VKVVGLYFVATTRVNVSPSLVLELLQRIARVIKDYLGVLNEDSFRKNFVLVYELLDEVID 121

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSY+FNEPIVV  ARL P+ PA+IF QG KRMPGTAVTKSVV N+PGG
Sbjct: 122 FGYVQTTSTEVLKSYIFNEPIVVSPARLQPIDPAAIFTQGAKRMPGTAVTKSVVANDPGG 181

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYL+GNPEIRLALNEDL+IGRGGR
Sbjct: 182 RRREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLSGNPEIRLALNEDLNIGRGGR 241

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           S+YDY SSSG G VILDDCNFHESV LD+FDSDRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 242 SVYDYRSSSGSG-VILDDCNFHESVRLDSFDSDRTLSLVPPDGEFPVMNYRMTQEFKPPF 301

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
            +N LIEEAG LKAEVI+K+RAEF S I ANT+ VQMPLP +T+R SFELEPGA G  TD
Sbjct: 302 HVNTLIEEAGRLKAEVIIKIRAEFPSDIIANTITVQMPLPNYTSRASFELEPGAAGQRTD 361

Query: 361 FKEATKRLEWGLKK 375
           FKE+ K LEW LKK
Sbjct: 362 FKESNKMLEWNLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match: AT1G60780.1 (AT1G60780.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 210.3 bits (534), Expect = 2.1e-54
Identity = 120/372 (32.26%), Postives = 205/372 (55.11%), Query Frame = 1 

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVSAAQAERFFTKLIEKEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNVYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT +V     G + 
Sbjct: 126 YPQYTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNAVSWRSEGIQY 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YLTG PE +L LN+ + +   GR+
Sbjct: 186 KKNEVFLDVIENVNILVNSNGQIVRSDVVGALKMRTYLTGMPECKLGLNDRVLLEAQGRA 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
                  + G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 -------TKGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGAFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTDF 362
           + A IE     + E+++K R++F    TA  V +++P+PT  +  +     G+     + 
Sbjct: 306 VEAQIESHSRSRVEMLIKARSQFKERSTATNVEIELPVPTDASNPTVRTSLGSASYAPE- 349

Query: 363 KEATKRLEWGLK 374
           K+A   L W +K
Sbjct: 366 KDA---LVWKIK 349

[Close]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match: AT1G10730.1 (AT1G10730.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 209.5 bits (532), Expect = 3.5e-54
Identity = 114/340 (33.53%), Postives = 193/340 (56.76%), Query Frame = 1 

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  F+L  +G  +V+RDYRG+V    AE FF K+   + D + + P  ++ +GV Y  V+
Sbjct: 6   SALFLLDIKGRVLVWRDYRGDVTAAQAERFFTKLIETEGDSQSNDPVAYD-NGVTYMFVQ 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVIDFG 122
              +  +  +R N + + +L  L R+  V K Y   L E+SLR NFV+VYELLDE++DFG
Sbjct: 66  HSNIYLMIASRQNCNAASLLFFLHRVVDVFKHYFEELEEESLRDNFVVVYELLDEMMDFG 125

Query: 123 YVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGGR- 182
           Y Q T   +L  ++  +   ++  + PP+                AVT SV     G + 
Sbjct: 126 YPQFTEARILSEFIKTDAYRMEVTQRPPM----------------AVTNSVSWRSEGLKF 185

Query: 183 NREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGRS 242
            + E+F+D+IE +++  +S+G I+ S++ G ++M++YL+G PE +L LN+ + +   GR+
Sbjct: 186 KKNEVFLDVIESVNILVNSNGQIVRSDVVGALKMRTYLSGMPECKLGLNDRILLEAQGRA 245

Query: 243 IYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPFR 302
           I        G  + L+D  FH+ V L  F++DRT+  +PP+G F +M YR++ + KP   
Sbjct: 246 I-------KGKAIDLEDIKFHQCVRLARFENDRTISFIPPDGSFDLMTYRLSTQVKPLIW 305

Query: 303 INALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPT 342
           + A IE     + E+++K R++F     A +V +++P+PT
Sbjct: 306 VEAHIERHSRSRVEMLVKARSQFKDRSYATSVEIELPVPT 321

[Close]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match: AT5G46630.2 (AT5G46630.2 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 197.6 bits (501), Expect = 1.4e-50
Identity = 120/378 (31.75%), Postives = 197/378 (52.12%), Query Frame = 1 

Query: 3   SQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFHVK 62
           S  + L+ RGD ++ R YR +V     + F   +   KE G     PV  + G ++ +++
Sbjct: 6   SAIYFLNLRGDVLINRTYRDDVGGNMVDAFRTHIMQTKELGNC---PVRQIGGCSFVYMR 65

Query: 63  VVGLLFVATTRINASPSLVLELLQRIARVIKDYLG-VLNEDSLRKNFVLVYELLDEVIDF 122
           +  +  V     NA+ +   + +     + K Y G   +ED++R NFVL+YELLDE++DF
Sbjct: 66  ISNVYIVIVVSSNANVACGFKFVVEAVALFKSYFGGAFDEDAIRNNFVLIYELLDEIMDF 125

Query: 123 GYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVG-----N 182
           GY Q  S E+LK Y+  E            G  S F    K  P    T  V G      
Sbjct: 126 GYPQNLSPEILKLYITQE------------GVRSPFSSKPKDKPVPNATLQVTGAVGWRR 185

Query: 183 EPGGRNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIG 242
           E     + E+F+DI+E +++  SS G +L  ++ G + MK +L+G P+++L LN+   IG
Sbjct: 186 EGLAYKKNEVFLDIVESVNLLMSSKGNVLRCDVTGKVLMKCFLSGMPDLKLGLND--KIG 245

Query: 243 RGGRSIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEF 302
               S      +  G T+ LDD  FH+ V+L  F+S++T+  VPP+GEF +M YR+T+  
Sbjct: 246 LEKESEMKSRPAKSGKTIELDDVTFHQCVNLTRFNSEKTVSFVPPDGEFELMKYRITEGV 305

Query: 303 KPPFRINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVG 362
             PFR+   I+E G  + EV +KV++ F + + A  V+V++P+P  T + +F++  G   
Sbjct: 306 NLPFRVLPTIKELGRTRMEVNVKVKSVFGAKMFALGVVVKIPVPKQTAKTNFQVTTG--- 362

Query: 363 NTTDFKEATKRLEWGLKK 375
               +  +   L W ++K
Sbjct: 366 -RAKYNPSIDCLVWKIRK 362

[Close]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match: AT1G56590.1 (AT1G56590.1 Clathrin adaptor complexes medium subunit family protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.4e-29
Identity = 93/339 (27.43%), Postives = 162/339 (47.79%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           M+   F++S  G+ ++ +   G     S   +F   ++  +     A PV        F 
Sbjct: 1   MLQCIFLISDSGEVMLEKQLTGHRVDRSICAWFWD-QYISQGDSFKALPVIASPTHYLFQ 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           +   G+ F+A +++   P + +E L R+A V+ +YLG LNED ++ NF++VYELLDE+ID
Sbjct: 61  IVRDGITFLACSQVEMPPLMAIEFLCRVADVLSEYLGGLNEDLIKDNFIIVYELLDEMID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
            G+  TT   +LK  +   P +V        G AS     +  +P  A +          
Sbjct: 121 NGFPLTTEPSILKEMI-APPNLVSKMLSVVTGNAS---NVSDTLPSGAGSCVPWRPTDPK 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
            +  E++VD++E++    +  G ++  EI G +QM S LTG P++ L             
Sbjct: 181 YSSNEVYVDLVEEMDAIVNRDGELVKCEIYGEVQMNSQLTGFPDLTL------------- 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
                   S     IL+D  FH  V    ++S + L  VPP+GEF +M+YR+ +    P 
Sbjct: 241 --------SFANPSILEDMRFHPCVRYRPWESHQVLSFVPPDGEFKLMSYRVKKLKNTPV 300

Query: 301 RINALI-EEAGPLKAEVILKVRAEFASSITANTVMVQMP 339
            +   I  ++G  +  V++ +R++   +I + T+  Q+P
Sbjct: 301 YVKPQITSDSGTCRISVLVGIRSDPGKTIESITLSFQLP 313

[Close]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match: gi|659133044|ref|XP_008466524.1| (PREDICTED: AP-4 complex subunit mu [Cucumis melo])

HSP 1 Score: 724.9 bits (1870), Expect = 7.1e-206
Identity = 365/374 (97.59%), Postives = 370/374 (98.93%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHLDNFD+DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDTDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match: gi|778686673|ref|XP_004147850.2| (PREDICTED: AP-4 complex subunit mu [Cucumis sativus])

HSP 1 Score: 719.9 bits (1857), Expect = 2.3e-204
Identity = 363/374 (97.06%), Postives = 368/374 (98.40%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLR+NFVLVYELLDEVID
Sbjct: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRRNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDYSSSSGGGTVILDDCNFHESVHL+NFD DRTLVLVPPEGEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYSSSSGGGTVILDDCNFHESVHLENFDIDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG LKAEVILKVRAEFASSITANT+M+QMPLPTFTTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGSLKAEVILKVRAEFASSITANTIMIQMPLPTFTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEW LKK
Sbjct: 361 FKEANKRLEWSLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match: gi|225458187|ref|XP_002281307.1| (PREDICTED: AP-4 complex subunit mu isoform X1 [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match: gi|731429658|ref|XP_010664723.1| (PREDICTED: AP-4 complex subunit mu isoform X2 [Vitis vinifera])

HSP 1 Score: 696.4 bits (1796), Expect = 2.7e-197
Identity = 348/374 (93.05%), Postives = 360/374 (96.26%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLFVATTR+N SPSLVLELLQRIARVIKDYLG+LNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFVATTRVNVSPSLVLELLQRIARVIKDYLGILNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKSYVFNEPIVVDAARLP LGPASIF+QG KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPTLGPASIFMQGTKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNE+LSIGRGGR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEELSIGRGGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SS+G GTVILDDCNFHESVHLD+FD DRTL LVPP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSTGSGTVILDDCNFHESVHLDSFDIDRTLTLVPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAG L+AEVILKVRAEF SSITANT+ VQMPLP +TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGALRAEVILKVRAEFPSSITANTIQVQMPLPPYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           FKEA KRLEWGLKK
Sbjct: 361 FKEANKRLEWGLKK 374

[Close]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match: gi|1009135362|ref|XP_015884948.1| (PREDICTED: AP-4 complex subunit mu-like [Ziziphus jujuba])

HSP 1 Score: 684.9 bits (1766), Expect = 8.1e-194
Identity = 337/374 (90.11%), Postives = 358/374 (95.72%), Query Frame = 1 

Query: 1   MISQFFVLSQRGDNIVFRDYRGEVPKGSAEIFFRKVKFWKEDGEGDAPPVFNLDGVNYFH 60
           MISQFFVLSQRGDNIVFRDYRGEV KGSAEIFFRKVKFWKEDGEGDAPP+FN+DGVNYFH
Sbjct: 1   MISQFFVLSQRGDNIVFRDYRGEVQKGSAEIFFRKVKFWKEDGEGDAPPIFNVDGVNYFH 60

Query: 61  VKVVGLLFVATTRINASPSLVLELLQRIARVIKDYLGVLNEDSLRKNFVLVYELLDEVID 120
           VKV GLLF ATTR+N SPSLVLELLQRIARV+KDYLGVLNEDSLRKNFVLVYELLDEVID
Sbjct: 61  VKVAGLLFAATTRVNVSPSLVLELLQRIARVVKDYLGVLNEDSLRKNFVLVYELLDEVID 120

Query: 121 FGYVQTTSTEVLKSYVFNEPIVVDAARLPPLGPASIFVQGNKRMPGTAVTKSVVGNEPGG 180
           FGYVQTTSTEVLKS +FNEPI+VDA RLPPLGPA+IF+QG+KRMPGTAVTKSVV NEPGG
Sbjct: 121 FGYVQTTSTEVLKSSIFNEPIMVDAGRLPPLGPAAIFMQGSKRMPGTAVTKSVVANEPGG 180

Query: 181 RNREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNEDLSIGRGGR 240
           R REEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALN+DLSIGR GR
Sbjct: 181 RKREEIFVDIIEKISVTFSSSGYILTSEIDGTIQMKSYLTGNPEIRLALNDDLSIGRSGR 240

Query: 241 SIYDYSSSSGGGTVILDDCNFHESVHLDNFDSDRTLVLVPPEGEFPVMNYRMTQEFKPPF 300
           SIYDY+SSSG G V+LDDCNFHESVHLD+FD DRTL L+PP+GEFPVMNYRMTQEFKPPF
Sbjct: 241 SIYDYNSSSGSGPVVLDDCNFHESVHLDSFDIDRTLTLIPPDGEFPVMNYRMTQEFKPPF 300

Query: 301 RINALIEEAGPLKAEVILKVRAEFASSITANTVMVQMPLPTFTTRVSFELEPGAVGNTTD 360
           RINALIEEAGPLKAEVI+KV AEFASS+ ANT++VQMPLPT+TTRVSFELEPGAVGNTTD
Sbjct: 301 RINALIEEAGPLKAEVIIKVFAEFASSVIANTILVQMPLPTYTTRVSFELEPGAVGNTTD 360

Query: 361 FKEATKRLEWGLKK 375
           +KEA KRLEWGLKK
Sbjct: 361 YKEANKRLEWGLKK 374

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g07820 vs. Swiss-Prot
Match NameE-valueIdentityDescription
AP4M_ARATH3.2e-18285.03AP-4 complex subunit mu OS=Arabidopsis thaliana GN=AP4M PE=2 SV=1[more]
AP4M1_BOVIN5.3e-6036.69AP-4 complex subunit mu-1 OS=Bos taurus GN=AP4M1 PE=2 SV=1[more]
AP4M1_HUMAN6.9e-6036.41AP-4 complex subunit mu-1 OS=Homo sapiens GN=AP4M1 PE=1 SV=2[more]
AP4M1_MOUSE7.6e-5936.41AP-4 complex subunit mu-1 OS=Mus musculus GN=Ap4m1 PE=2 SV=1[more]
AP4M1_RAT7.6e-5936.13AP-4 complex subunit mu-1 OS=Rattus norvegicus GN=Ap4m1 PE=1 SV=1[more]
BLAST of Cp4.1LG02g07820 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LGF2_CUCSA1.6e-20497.06Uncharacterized protein OS=Cucumis sativus GN=Csa_3G860300 PE=3 SV=1[more]
F6H1J1_VITVI1.9e-19793.05Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13000 PE=3 SV=... [more]
A0A061FCH7_THECC1.4e-18990.11Clathrin adaptor complexes medium subunit family protein isoform 1 OS=Theobroma ... [more]
A0A0D2S6L8_GOSRA9.4e-18989.57Uncharacterized protein OS=Gossypium raimondii GN=B456_009G230200 PE=3 SV=1[more]
W9SC15_9ROSA1.2e-18887.50AP-4 complex subunit mu-1 OS=Morus notabilis GN=L484_021921 PE=3 SV=1[more]
BLAST of Cp4.1LG02g07820 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24550.21.8e-18385.03 Clathrin adaptor complexes medium subunit family protein[more]
AT1G60780.12.1e-5432.26 Clathrin adaptor complexes medium subunit family protein[more]
AT1G10730.13.5e-5433.53 Clathrin adaptor complexes medium subunit family protein[more]
AT5G46630.21.4e-5031.75 Clathrin adaptor complexes medium subunit family protein[more]
AT1G56590.11.4e-2927.43 Clathrin adaptor complexes medium subunit family protein[more]
BLAST of Cp4.1LG02g07820 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659133044|ref|XP_008466524.1|7.1e-20697.59PREDICTED: AP-4 complex subunit mu [Cucumis melo][more]
gi|778686673|ref|XP_004147850.2|2.3e-20497.06PREDICTED: AP-4 complex subunit mu [Cucumis sativus][more]
gi|225458187|ref|XP_002281307.1|2.7e-19793.05PREDICTED: AP-4 complex subunit mu isoform X1 [Vitis vinifera][more]
gi|731429658|ref|XP_010664723.1|2.7e-19793.05PREDICTED: AP-4 complex subunit mu isoform X2 [Vitis vinifera][more]
gi|1009135362|ref|XP_015884948.1|8.1e-19490.11PREDICTED: AP-4 complex subunit mu-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0016192vesicle-mediated transport
GO:0006886intracellular protein transport
Vocabulary: Cellular Component
TermDefinition
GO:0030131clathrin adaptor complex
Vocabulary: INTERPRO
TermDefinition
IPR022775AP_mu_sigma_su
IPR011012Longin-like_dom_sf
IPR001392Clathrin_mu
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006810 transport
cellular_component GO:0030131 clathrin adaptor complex
cellular_component GO:0005829 cytosol
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g07820.1Cp4.1LG02g07820.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001392Clathrin adaptor, mu subunitPRINTSPR00314CLATHRINADPTcoord: 325..340
score: 3.0E-30coord: 12..32
score: 3.0E-30coord: 101..128
score: 3.0E-30coord: 256..283
score: 3.0
IPR001392Clathrin adaptor, mu subunitPIRPIRSF005992AP_complex_mucoord: 1..377
score: 1.3
IPR011012Longin-like domainunknownSSF64356SNARE-likecoord: 1..141
score: 3.52
IPR022775AP complex, mu/sigma subunitPFAMPF01217Clat_adaptor_scoord: 1..132
score: 1.
NoneNo IPR availableGENE3DG3DSA:2.60.40.1170coord: 182..341
score: 1.6
NoneNo IPR availableGENE3DG3DSA:3.30.450.60coord: 1..140
score: 1.2
NoneNo IPR availablePANTHERPTHR10529LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDcoord: 165..376
score: 1.4E-126coord: 1..149
score: 1.4E
NoneNo IPR availablePANTHERPTHR10529:SF242PROTEIN M03E7.4coord: 165..376
score: 1.4E-126coord: 1..149
score: 1.4E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g07820Cucsa.342660Cucumber (Gy14) v1cgycpeB0885
Cp4.1LG02g07820CmaCh09G001340Cucurbita maxima (Rimu)cmacpeB045
Cp4.1LG02g07820CmaCh01G019320Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g07820CmoCh01G019950Cucurbita moschata (Rifu)cmocpeB450
Cp4.1LG02g07820CmoCh09G001310Cucurbita moschata (Rifu)cmocpeB020
Cp4.1LG02g07820Cla020794Watermelon (97103) v1cpewmB559
Cp4.1LG02g07820Csa3G860300Cucumber (Chinese Long) v2cpecuB556
Cp4.1LG02g07820MELO3C003795Melon (DHL92) v3.5.1cpemeB516
Cp4.1LG02g07820ClCG05G018710Watermelon (Charleston Gray)cpewcgB509
Cp4.1LG02g07820CSPI03G43010Wild cucumber (PI 183967)cpecpiB558
Cp4.1LG02g07820Lsi04G017000Bottle gourd (USVL1VR-Ls)cpelsiB462
Cp4.1LG02g07820MELO3C003795.2Melon (DHL92) v3.6.1cpemedB614
Cp4.1LG02g07820CsaV3_3G045470Cucumber (Chinese Long) v3cpecucB0693
Cp4.1LG02g07820Bhi09G001869Wax gourdcpewgoB0729
Cp4.1LG02g07820CsGy3G040570Cucumber (Gy14) v2cgybcpeB387
Cp4.1LG02g07820Carg17163Silver-seed gourdcarcpeB1309
Cp4.1LG02g07820Carg08705Silver-seed gourdcarcpeB0153
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG02g07820Cp4.1LG06g00850Cucurbita pepo (Zucchini)cpecpeB459
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g07820Cucurbita pepo (Zucchini)cpecpeB091
Cp4.1LG02g07820Cucurbita pepo (Zucchini)cpecpeB125
Cp4.1LG02g07820Cucurbita pepo (Zucchini)cpecpeB301
Cp4.1LG02g07820Cucurbita pepo (Zucchini)cpecpeB415
Cp4.1LG02g07820Cucurbita pepo (Zucchini)cpecpeB471
Cp4.1LG02g07820Cucumber (Gy14) v1cgycpeB0042
Cp4.1LG02g07820Cucumber (Gy14) v1cgycpeB0612
Cp4.1LG02g07820Cucurbita maxima (Rimu)cmacpeB190
Cp4.1LG02g07820Cucurbita maxima (Rimu)cmacpeB570
Cp4.1LG02g07820Cucurbita maxima (Rimu)cmacpeB678
Cp4.1LG02g07820Cucurbita maxima (Rimu)cmacpeB780
Cp4.1LG02g07820Cucurbita maxima (Rimu)cmacpeB882
Cp4.1LG02g07820Cucurbita moschata (Rifu)cmocpeB166
Cp4.1LG02g07820Cucurbita moschata (Rifu)cmocpeB521
Cp4.1LG02g07820Cucurbita moschata (Rifu)cmocpeB632
Cp4.1LG02g07820Cucurbita moschata (Rifu)cmocpeB734
Cp4.1LG02g07820Cucurbita moschata (Rifu)cmocpeB819
Cp4.1LG02g07820Wild cucumber (PI 183967)cpecpiB541
Cp4.1LG02g07820Wild cucumber (PI 183967)cpecpiB542
Cp4.1LG02g07820Wild cucumber (PI 183967)cpecpiB586
Cp4.1LG02g07820Cucumber (Chinese Long) v2cpecuB539
Cp4.1LG02g07820Cucumber (Chinese Long) v2cpecuB540
Cp4.1LG02g07820Cucumber (Chinese Long) v2cpecuB585
Cp4.1LG02g07820Bottle gourd (USVL1VR-Ls)cpelsiB436
Cp4.1LG02g07820Bottle gourd (USVL1VR-Ls)cpelsiB439
Cp4.1LG02g07820Bottle gourd (USVL1VR-Ls)cpelsiB477
Cp4.1LG02g07820Watermelon (Charleston Gray)cpewcgB497
Cp4.1LG02g07820Watermelon (Charleston Gray)cpewcgB528
Cp4.1LG02g07820Watermelon (97103) v1cpewmB541
Cp4.1LG02g07820Watermelon (97103) v1cpewmB577
Cp4.1LG02g07820Melon (DHL92) v3.5.1cpemeB508
Cp4.1LG02g07820Cucumber (Gy14) v2cgybcpeB224
Cp4.1LG02g07820Cucumber (Gy14) v2cgybcpeB226
Cp4.1LG02g07820Cucumber (Gy14) v2cgybcpeB823
Cp4.1LG02g07820Melon (DHL92) v3.6.1cpemedB605
Cp4.1LG02g07820Melon (DHL92) v3.6.1cpemedB649
Cp4.1LG02g07820Silver-seed gourdcarcpeB0265
Cp4.1LG02g07820Silver-seed gourdcarcpeB0566
Cp4.1LG02g07820Silver-seed gourdcarcpeB1066
Cp4.1LG02g07820Silver-seed gourdcarcpeB1362
Cp4.1LG02g07820Cucumber (Chinese Long) v3cpecucB0680
Cp4.1LG02g07820Cucumber (Chinese Long) v3cpecucB0724
Cp4.1LG02g07820Wax gourdcpewgoB0694