Cp4.1LG01g25550.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g25550.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pyrroline-5-carboxylate synthetase
Location	Cp4.1LG01 : 20803288 .. 20803905 (+)
Sequence length	255

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTACCTCTCATTTCAACCACATTTTCATGTTTCCCGATGTTCTTTTTTTATTCCTTTATTTTTTTTTTGTGGTTTTCATTCTGTTTGAGCTTTATATTCTTCGTTCTCATCAATGTTTGCCGATTTGGATTCCCTCTGTGTGTTGCAACTTCTCCTCAGTTCATCCTACTGGAAAACCACGTGCAGATTATCTCAATTTTGGATCATCAAACCGTTGATAATATAATTTACTTACCTGTTATTGGATGTTGTGCTTTTCTTATTGAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGGTATTTACCTTGCACGCTCAAGTTCAATCTTTTGATAGTGATAGGACTTTTTTTTTTTTTTTTTTTTAATATTAAGATTACAATCTGGAATGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA

mRNA sequence

ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA

Coding sequence (CDS)

ATGGACTCCATGGATCGCTCTCGAGCTTTCCTTCGGGATGTCAAGCGCCTGGTTGTCAAGGTTGGGACGGCGGTGGTAACGCGAAGTGATGGAAGATTAGCCTTAGGCAGACTAGGAGCATTGTGTGAGCAGATCAAGGAACTTAACTCCCAAGAATACGAGGTTATTTTGGTTTCATCCGGTGCTGTTGGCATTGGTCGTCAAAGGCTCCGATACAGGAAGCTCGTTAATAGCAGGTTATTTTGTGCGGGATAA

Protein sequence

MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSSGAVGIGRQRLRYRKLVNSRLFCAG

Homology

[Close]

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot
Match: P5CS_SOLLC (Delta-1-pyrroline-5-carboxylate synthase OS=Solanum lycopersicum GN=PRO2 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-29
Identity = 62/78 (79.49%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          M+++D +RAF+++VKRL+VKVGTAVVTR+DGRLALGRLGALCEQ++ELNSQ YEVILV+S
Sbjct: 1  METVDSTRAFVKNVKRLIVKVGTAVVTRADGRLALGRLGALCEQLQELNSQGYEVILVTS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYRKL+NS
Sbjct: 61 GAVGVGRQRLRYRKLLNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot
Match: P5CS_ACTDE (Delta-1-pyrroline-5-carboxylate synthase OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 5.3e-29
Identity = 62/78 (79.49%), Postives = 74/78 (94.87%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MD++D +RAF++ VKR+++KVGTAVVTR+DGRLALGRLGALCEQI ELNSQ +EVILV+S
Sbjct: 1  MDAVDSTRAFVKGVKRVIIKVGTAVVTRADGRLALGRLGALCEQIHELNSQGFEVILVTS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYRKLVNS
Sbjct: 61 GAVGVGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot
Match: P5CS_ORYSJ (Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp. japonica GN=P5CS PE=2 SV=2)

HSP 1 Score: 127.1 bits (318), Expect = 9.1e-29
Identity = 62/78 (79.49%), Postives = 73/78 (93.59%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          M S+D SR+F+RDVKR+++KVGTAVV+R DGRLALGR+GALCEQ+KELNS  YEVILV+S
Sbjct: 1  MASVDPSRSFVRDVKRVIIKVGTAVVSRQDGRLALGRVGALCEQVKELNSLGYEVILVTS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYRKLVNS
Sbjct: 61 GAVGVGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot
Match: P5CS1_ARATH (Delta-1-pyrroline-5-carboxylate synthase A OS=Arabidopsis thaliana GN=P5CSA PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.5e-28
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          M+ +DRSRAF RDVKR+VVKVGTAVVT   GRLALGRLGALCEQ+ ELNS  +EVILVSS
Sbjct: 1  MEELDRSRAFARDVKRIVVKVGTAVVTGKGGRLALGRLGALCEQLAELNSDGFEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYR+LVNS
Sbjct: 61 GAVGLGRQRLRYRQLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot
Match: P5CS_MESCR (Delta-1-pyrroline-5-carboxylate synthase OS=Mesembryanthemum crystallinum GN=P5CS PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 7.7e-28
Identity = 62/75 (82.67%), Postives = 70/75 (93.33%), Query Frame = 1


Query: 4  MDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSSGAV 63
          MD +RAF++DVKR+VVKVGTAVVTRSDGRLALGRLG+LCEQ+KELNS  YEVILV+SGAV
Sbjct: 1  MDATRAFVKDVKRVVVKVGTAVVTRSDGRLALGRLGSLCEQLKELNSDGYEVILVTSGAV 60

Query: 64 GIGRQRLRYRKLVNS 79
            GRQRLR+RKLVNS
Sbjct: 61 SAGRQRLRFRKLVNS 75

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL
Match: A0A0A0KBH3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008780 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 4.2e-33
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMDRSR FLRDVKRLV+KVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS
Sbjct: 1  MDSMDRSRTFLRDVKRLVIKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYRKLVNS
Sbjct: 61 GAVGIGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL
Match: G3M0R4_CUCME (Pyrroline-5-carboxylate synthetase OS=Cucumis melo PE=2 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 4.7e-32
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MD MDRSRAFLRDVKRLV+KV TAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS
Sbjct: 1  MDPMDRSRAFLRDVKRLVIKVRTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYRKLVNS
Sbjct: 61 GAVGIGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL
Match: G3M3X1_9ROSI (Delta-1-pyrroline-5-carboxylate synthetase OS=Cucurbita maxima x Cucurbita moschata GN=P5CS PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 1.0e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMDRSR FLR+VKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQE+EVILVSS
Sbjct: 1  MDSMDRSRTFLRNVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEFEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYR+LVNS
Sbjct: 61 GAVGIGRQRLRYRQLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL
Match: M9P0B4_CARPA (Gamma-glutamyl phosphate reductase OS=Carica papaya GN=P5CS2 PE=2 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 3.4e-30
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MD +DRSRAF++DVKRLV+KVGTAVVTR+DGRLALGRLG LCEQIKELNSQ YEVILVSS
Sbjct: 1  MDGLDRSRAFVKDVKRLVIKVGTAVVTRNDGRLALGRLGGLCEQIKELNSQGYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYRKLVNS
Sbjct: 61 GAVGLGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL
Match: A0A061ERW5_THECC (Pyrroline-5-carboxylate synthetase isoform 1 OS=Theobroma cacao GN=TCM_021858 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.8e-29
Identity = 67/80 (83.75%), Postives = 76/80 (95.00%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMD SRAF+ +VKRL+VKVGTAVVTR+DGRLALGRLGALCEQ+KELNSQ YE++LV+S
Sbjct: 1  MDSMDPSRAFVTNVKRLIVKVGTAVVTRADGRLALGRLGALCEQLKELNSQGYEIVLVTS 60

Query: 61 GAVGIGRQRLRYRKLVNSRL 81
          GAVG+GRQRLRYRKLVNS L
Sbjct: 61 GAVGLGRQRLRYRKLVNSSL 80

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TAIR10
Match: AT2G39800.1 (AT2G39800.1 delta1-pyrroline-5-carboxylate synthase 1)

HSP 1 Score: 124.8 bits (312), Expect = 2.5e-29
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          M+ +DRSRAF RDVKR+VVKVGTAVVT   GRLALGRLGALCEQ+ ELNS  +EVILVSS
Sbjct: 1  MEELDRSRAFARDVKRIVVKVGTAVVTGKGGRLALGRLGALCEQLAELNSDGFEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYR+LVNS
Sbjct: 61 GAVGLGRQRLRYRQLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. TAIR10
Match: AT3G55610.1 (AT3G55610.1 delta 1-pyrroline-5-carboxylate synthase 2)

HSP 1 Score: 121.3 bits (303), Expect = 2.8e-28
Identity = 61/78 (78.21%), Postives = 69/78 (88.46%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          M  +DRSRAF +DVKR+VVKVGTAVVT   GRLALGRLGA+CEQ+ ELNS  +EVILVSS
Sbjct: 1  MTEIDRSRAFAKDVKRIVVKVGTAVVTGKGGRLALGRLGAICEQLAELNSDGFEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYR+LVNS
Sbjct: 61 GAVGLGRQRLRYRQLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr
Match: gi|659081570|ref|XP_008441400.1| (PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Cucumis melo])

HSP 1 Score: 149.8 bits (377), Expect = 2.1e-33
Identity = 77/78 (98.72%), Postives = 78/78 (100.00%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMDRSRAFLRDVKRLV+KVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS
Sbjct: 1  MDSMDRSRAFLRDVKRLVIKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYRKLVNS
Sbjct: 61 GAVGIGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr
Match: gi|449441360|ref|XP_004138450.1| (PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 6.1e-33
Identity = 76/78 (97.44%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMDRSR FLRDVKRLV+KVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS
Sbjct: 1  MDSMDRSRTFLRDVKRLVIKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYRKLVNS
Sbjct: 61 GAVGIGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr
Match: gi|346426988|gb|AEO27874.1| (pyrroline-5-carboxylate synthetase [Cucumis melo])

HSP 1 Score: 144.8 bits (364), Expect = 6.7e-32
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MD MDRSRAFLRDVKRLV+KV TAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS
Sbjct: 1  MDPMDRSRAFLRDVKRLVIKVRTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYRKLVNS
Sbjct: 61 GAVGIGRQRLRYRKLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr
Match: gi|344310983|gb|AEN04066.1| (delta-1-pyrroline-5-carboxylate synthetase [Cucurbita maxima x Cucurbita moschata])

HSP 1 Score: 143.7 bits (361), Expect = 1.5e-31
Identity = 74/78 (94.87%), Postives = 77/78 (98.72%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MDSMDRSR FLR+VKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQE+EVILVSS
Sbjct: 1  MDSMDRSRTFLRNVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEFEVILVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVGIGRQRLRYR+LVNS
Sbjct: 61 GAVGIGRQRLRYRQLVNS 78

[Close]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr
Match: gi|1009119817|ref|XP_015876587.1| (PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Ziziphus jujuba])

HSP 1 Score: 138.7 bits (348), Expect = 4.8e-30
Identity = 69/78 (88.46%), Postives = 75/78 (96.15%), Query Frame = 1


Query: 1  MDSMDRSRAFLRDVKRLVVKVGTAVVTRSDGRLALGRLGALCEQIKELNSQEYEVILVSS 60
          MD MDRSRAF++DVKR+VVKVGTAVVTR DGRLALGR+GALCEQIKELNSQ YEVI+VSS
Sbjct: 1  MDEMDRSRAFVKDVKRIVVKVGTAVVTRKDGRLALGRVGALCEQIKELNSQGYEVIMVSS 60

Query: 61 GAVGIGRQRLRYRKLVNS 79
          GAVG+GRQRLRYRKLVNS
Sbjct: 61 GAVGLGRQRLRYRKLVNS 78

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g25550.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
P5CS_SOLLC	2.4e-29	79.49	Delta-1-pyrroline-5-carboxylate synthase OS=Solanum lycopersicum GN=PRO2 PE=2 SV...	[more]
P5CS_ACTDE	5.3e-29	79.49	Delta-1-pyrroline-5-carboxylate synthase OS=Actinidia deliciosa PE=2 SV=1	[more]
P5CS_ORYSJ	9.1e-29	79.49	Delta-1-pyrroline-5-carboxylate synthase OS=Oryza sativa subsp. japonica GN=P5CS...	[more]
P5CS1_ARATH	4.5e-28	80.77	Delta-1-pyrroline-5-carboxylate synthase A OS=Arabidopsis thaliana GN=P5CSA PE=1...	[more]
P5CS_MESCR	7.7e-28	82.67	Delta-1-pyrroline-5-carboxylate synthase OS=Mesembryanthemum crystallinum GN=P5C...	[more]

BLAST of Cp4.1LG01g25550.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBH3_CUCSA	4.2e-33	97.44	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G008780 PE=3 SV=1	[more]
G3M0R4_CUCME	4.7e-32	96.15	Pyrroline-5-carboxylate synthetase OS=Cucumis melo PE=2 SV=1	[more]
G3M3X1_9ROSI	1.0e-31	94.87	Delta-1-pyrroline-5-carboxylate synthetase OS=Cucurbita maxima x Cucurbita mosch...	[more]
M9P0B4_CARPA	3.4e-30	88.46	Gamma-glutamyl phosphate reductase OS=Carica papaya GN=P5CS2 PE=2 SV=1	[more]
A0A061ERW5_THECC	2.8e-29	83.75	Pyrroline-5-carboxylate synthetase isoform 1 OS=Theobroma cacao GN=TCM_021858 PE...	[more]

BLAST of Cp4.1LG01g25550.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39800.1	2.5e-29	80.77	delta1-pyrroline-5-carboxylate synthase 1	[more]
AT3G55610.1	2.8e-28	78.21	delta 1-pyrroline-5-carboxylate synthase 2	[more]

BLAST of Cp4.1LG01g25550.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081570\|ref\|XP_008441400.1\|	2.1e-33	98.72	PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Cucumis melo]	[more]
gi\|449441360\|ref\|XP_004138450.1\|	6.1e-33	97.44	PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Cucumis sativus]	[more]
gi\|346426988\|gb\|AEO27874.1\|	6.7e-32	96.15	pyrroline-5-carboxylate synthetase [Cucumis melo]	[more]
gi\|344310983\|gb\|AEN04066.1\|	1.5e-31	94.87	delta-1-pyrroline-5-carboxylate synthetase [Cucurbita maxima x Cucurbita moschat...	[more]
gi\|1009119817\|ref\|XP_015876587.1\|	4.8e-30	88.46	PREDICTED: delta-1-pyrroline-5-carboxylate synthase [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001048	Asp/Glu/Uridylate_kinase

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006537	glutamate biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0016310	phosphorylation
biological_process	GO:0006561	proline biosynthetic process
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0004349	glutamate 5-kinase activity
molecular_function	GO:0004350	glutamate-5-semialdehyde dehydrogenase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g25550	Cp4.1LG01g25550	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g25550.1:cds:001	Cp4.1LG01g25550.1:cds:001	CDS
Cp4.1LG01g25550.1:cds:002	Cp4.1LG01g25550.1:cds:002	CDS
Cp4.1LG01g25550.1:cds:003	Cp4.1LG01g25550.1:cds:003	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g25550.1	Cp4.1LG01g25550.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001048	Aspartate/glutamate/uridylate kinase	GENE3D	G3DSA:3.40.1160.10		coord: 10..74 score: 1.0
IPR001048	Aspartate/glutamate/uridylate kinase	PFAM	PF00696	AA_kinase	coord: 15..71 score: 3.
IPR001048	Aspartate/glutamate/uridylate kinase	unknown	SSF53633	Carbamate kinase-like	coord: 15..72 score: 1.95