Cp4.1LG01g22950.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g22950.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger family protein
Location	Cp4.1LG01 : 19990686 .. 19990976 (-)
Sequence length	291

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

mRNA sequence

ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

Coding sequence (CDS)

ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

Protein sequence

MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA

Homology

[Close]

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot
Match: MIF2_ARATH (Mini zinc finger protein 2 OS=Arabidopsis thaliana GN=MIF2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-34
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1


Query: 1  MRKRQVVVRR---EESSRDS-VASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-G 60
          MRKRQVV+RR   EE SR S  ASSLTVR+VRYGECQKNHAA VGGYAVDGCREFMAS G
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 DEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
          +EGT AALTCAACGCHR+FHRR+ + TEVVCDC+S PS G
Sbjct: 61 EEGTVAALTCAACGCHRSFHRRE-IETEVVCDCNSPPSTG 99

[Close]

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot
Match: MIF3_ARATH (Mini zinc finger protein 3 OS=Arabidopsis thaliana GN=MIF3 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-24
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          M+KRQVV+++ +SS    +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +   
Sbjct: 1  MKKRQVVIKQRKSSYTMTSSS---SNVRYVECQKNHAANIGGYAVDGCREFMASGGDD-- 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSN 95
           ALTCAACGCHRNFHRR+ V TEVVC+ S   +N
Sbjct: 61 -ALTCAACGCHRNFHRRE-VDTEVVCEYSPPNAN 87

[Close]

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot
Match: MIF1_ARATH (Mini zinc finger protein 1 OS=Arabidopsis thaliana GN=MIF1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MRKRQVVVRREE---------SSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREF 60
          M+KRQ+V+++           ++  S +SS  + +VRY ECQKNHAA +GGYAVDGCREF
Sbjct: 2  MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61 MASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCS 90
          MA+G EGT  AL CAACGCHRNFHR++ V TEVVC+ S
Sbjct: 62 MAAGVEGTVDALRCAACGCHRNFHRKE-VDTEVVCEYS 98

[Close]

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot
Match: MIF1_ORYSJ (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica GN=MIF1 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 27  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVC 86
           VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+       C
Sbjct: 33  VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAEC 92

Query: 87  DCSSSPSNG 96
           DCSS  S+G
Sbjct: 93  DCSSDTSSG 101

[Close]

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot
Match: MIF1_ORYSI (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica GN=MIF1 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1


Query: 27  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVC 86
           VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+       C
Sbjct: 33  VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAEC 92

Query: 87  DCSSSPSNG 96
           DCSS  S+G
Sbjct: 93  DCSSDTSSG 101

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL
Match: A0A0A0KVJ7_CUCSA (Transcription factor OS=Cucumis sativus GN=Csa_5G636500 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-40
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 1


Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EESSRDSVASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEESSRDSVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSP 93
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSP
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSP 92

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL
Match: A0A061EGD2_THECC (Mini zinc finger 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 45  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 104

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 105 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 139

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL
Match: A0A061EEU8_THECC (Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 42  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 101

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 102 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 136

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL
Match: W9QMA1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013609 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-35
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 1


Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVVVRR EE  R S  SS++VR+VRYGECQKNHAAGVGGYAVDGCREFMASG+EGT
Sbjct: 1  MRKRQVVVRRSEEPLRSSANSSMSVRNVRYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
          + ALTCAACGCHRNFHRR+   TEVVC+CSS  SNGA
Sbjct: 61 SGALTCAACGCHRNFHRREVETTEVVCECSSPSSNGA 97

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL
Match: A0A067GB00_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043591mg PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-35
Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 1


Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          MRKRQVV+RREE SR+S ASS+TVRSVRY ECQKNHAAGVGGYAVDGCREFMASG+EGT 
Sbjct: 1  MRKRQVVLRREEPSRNSTASSVTVRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTA 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPS 94
          AALTCAACGCHR+FHRR+ V TEVVC+CSS  S
Sbjct: 61 AALTCAACGCHRSFHRRE-VDTEVVCECSSPSS 92

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10
Match: AT3G28917.1 (AT3G28917.1 mini zinc finger 2)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-35
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1


Query: 1  MRKRQVVVRR---EESSRDS-VASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-G 60
          MRKRQVV+RR   EE SR S  ASSLTVR+VRYGECQKNHAA VGGYAVDGCREFMAS G
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 DEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
          +EGT AALTCAACGCHR+FHRR+ + TEVVCDC+S PS G
Sbjct: 61 EEGTVAALTCAACGCHRSFHRRE-IETEVVCDCNSPPSTG 99

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10
Match: AT1G18835.1 (AT1G18835.1 mini zinc finger)

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-25
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 1


Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          M+KRQVV+++ +SS    +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +   
Sbjct: 1  MKKRQVVIKQRKSSYTMTSSS---SNVRYVECQKNHAANIGGYAVDGCREFMASGGDD-- 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSN 95
           ALTCAACGCHRNFHRR+ V TEVVC+ S   +N
Sbjct: 61 -ALTCAACGCHRNFHRRE-VDTEVVCEYSPPNAN 87

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10
Match: AT1G74660.1 (AT1G74660.1 mini zinc finger 1)

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1


Query: 1  MRKRQVVVRREE---------SSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREF 60
          M+KRQ+V+++           ++  S +SS  + +VRY ECQKNHAA +GGYAVDGCREF
Sbjct: 2  MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61 MASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCS 90
          MA+G EGT  AL CAACGCHRNFHR++ V TEVVC+ S
Sbjct: 62 MAAGVEGTVDALRCAACGCHRNFHRKE-VDTEVVCEYS 98

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-17
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1


Query: 27 VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQ 79
          +RY EC KNHA  +GG+AVDGC EFM SG++GT  AL CAACGCHRNFHR++
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKE 98

[Close]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10
Match: AT3G50890.1 (AT3G50890.1 homeobox protein 28)

HSP 1 Score: 85.1 bits (209), Expect = 2.5e-17
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 1


Query: 25  RSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVG 82
           +  +Y ECQKNHAA  GG+ VDGC EFMA G+EGT  AL CAAC CHR+FHR++  G
Sbjct: 56  QGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYG 112

[Close]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr
Match: gi|659118799|ref|XP_008459312.1| (PREDICTED: mini zinc finger protein 2 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 1


Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EE SRD+VASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEEPSRDTVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSPSNG
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSPSNG 95

[Close]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr
Match: gi|449461927|ref|XP_004148693.1| (PREDICTED: mini zinc finger protein 2 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 1


Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EESSRDSVASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEESSRDSVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSP 93
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSP
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSP 92

[Close]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr
Match: gi|590649967|ref|XP_007032531.1| (Mini zinc finger 2 isoform 2, partial [Theobroma cacao])

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 45  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 104

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 105 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 139

[Close]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr
Match: gi|590649964|ref|XP_007032530.1| (Mini zinc finger 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1


Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 42  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 101

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 102 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 136

[Close]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr
Match: gi|703068159|ref|XP_010088164.1| (hypothetical protein L484_013609 [Morus notabilis])

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-35
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 1


Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVVVRR EE  R S  SS++VR+VRYGECQKNHAAGVGGYAVDGCREFMASG+EGT
Sbjct: 1  MRKRQVVVRRSEEPLRSSANSSMSVRNVRYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
          + ALTCAACGCHRNFHRR+   TEVVC+CSS  SNGA
Sbjct: 61 SGALTCAACGCHRNFHRREVETTEVVCECSSPSSNGA 97

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g22950.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MIF2_ARATH	2.8e-34	79.00	Mini zinc finger protein 2 OS=Arabidopsis thaliana GN=MIF2 PE=1 SV=1	[more]
MIF3_ARATH	4.5e-24	63.83	Mini zinc finger protein 3 OS=Arabidopsis thaliana GN=MIF3 PE=1 SV=1	[more]
MIF1_ARATH	1.0e-23	58.16	Mini zinc finger protein 1 OS=Arabidopsis thaliana GN=MIF1 PE=1 SV=1	[more]
MIF1_ORYSJ	1.7e-23	71.01	Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica GN=MIF1 PE=3 SV=1	[more]
MIF1_ORYSI	1.7e-23	71.01	Mini zinc finger protein 1 OS=Oryza sativa subsp. indica GN=MIF1 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g22950.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVJ7_CUCSA	9.1e-40	93.55	Transcription factor OS=Cucumis sativus GN=Csa_5G636500 PE=4 SV=1	[more]
A0A061EGD2_THECC	1.7e-38	85.42	Mini zinc finger 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018545 PE=4 SV...	[more]
A0A061EEU8_THECC	1.7e-38	85.42	Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1	[more]
W9QMA1_9ROSA	1.4e-35	80.41	Uncharacterized protein OS=Morus notabilis GN=L484_013609 PE=4 SV=1	[more]
A0A067GB00_CITSI	1.8e-35	83.87	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043591mg PE=4 SV=1	[more]

BLAST of Cp4.1LG01g22950.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G28917.1	1.6e-35	79.00	mini zinc finger 2	[more]
AT1G18835.1	2.5e-25	63.83	mini zinc finger	[more]
AT1G74660.1	5.7e-25	58.16	mini zinc finger 1	[more]
AT4G24660.1	1.5e-17	69.23	homeobox protein 22	[more]
AT3G50890.1	2.5e-17	63.16	homeobox protein 28	[more]

BLAST of Cp4.1LG01g22950.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659118799\|ref\|XP_008459312.1\|	2.0e-40	91.67	PREDICTED: mini zinc finger protein 2 [Cucumis melo]	[more]
gi\|449461927\|ref\|XP_004148693.1\|	1.3e-39	93.55	PREDICTED: mini zinc finger protein 2 [Cucumis sativus]	[more]
gi\|590649967\|ref\|XP_007032531.1\|	2.5e-38	85.42	Mini zinc finger 2 isoform 2, partial [Theobroma cacao]	[more]
gi\|590649964\|ref\|XP_007032530.1\|	2.5e-38	85.42	Mini zinc finger 2 isoform 1 [Theobroma cacao]	[more]
gi\|703068159\|ref\|XP_010088164.1\|	2.0e-35	80.41	hypothetical protein L484_013609 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006456	ZF_HD_homeobox_Cys/His_dimer

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g22950	Cp4.1LG01g22950	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g22950.1:cds:001	Cp4.1LG01g22950.1:cds:001	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g22950.1	Cp4.1LG01g22950.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PRODOM	PD125774		coord: 22..93 score: 3.0
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PFAM	PF04770	ZF-HD_dimer	coord: 27..79 score: 3.6
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	TIGRFAMs	TIGR01566	TIGR01566	coord: 28..78 score: 3.4
IPR006456	ZF-HD homeobox protein, Cys/His-rich dimerisation domain	PROFILE	PS51523	ZF_HD_DIMER	coord: 29..78 score: 25
None	No IPR available	PANTHER	PTHR31948	FAMILY NOT NAMED	coord: 1..96 score: 1.5
None	No IPR available	PANTHER	PTHR31948:SF12	MINI ZINC FINGER PROTEIN 2	coord: 1..96 score: 1.5