Cp4.1LG01g22950 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g22950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger family protein
LocationCp4.1LG01 : 19990686 .. 19990976 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

mRNA sequence

ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

Coding sequence (CDS)

ATGAGGAAGCGTCAAGTTGTAGTTAGAAGGGAAGAAAGCTCAAGAGACAGTGTGGCTTCATCTTTGACAGTAAGGAGTGTTAGATATGGGGAGTGCCAAAAGAACCATGCCGCTGGCGTCGGAGGGTATGCTGTCGACGGGTGTCGGGAATTCATGGCGAGCGGCGACGAAGGGACGAATGCTGCACTTACTTGTGCTGCCTGTGGTTGTCACCGGAACTTCCATAGAAGACAAGCTGTAGGAACTGAGGTTGTGTGTGATTGTTCTTCATCTCCCTCAAATGGAGCTTGA

Protein sequence

MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA
Homology
[Close]
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match: MIF2_ARATH (Mini zinc finger protein 2 OS=Arabidopsis thaliana GN=MIF2 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 2.8e-34
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1 

Query: 1  MRKRQVVVRR---EESSRDS-VASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-G 60
          MRKRQVV+RR   EE SR S  ASSLTVR+VRYGECQKNHAA VGGYAVDGCREFMAS G
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 DEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
          +EGT AALTCAACGCHR+FHRR+ + TEVVCDC+S PS G
Sbjct: 61 EEGTVAALTCAACGCHRSFHRRE-IETEVVCDCNSPPSTG 99

[Close]
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match: MIF3_ARATH (Mini zinc finger protein 3 OS=Arabidopsis thaliana GN=MIF3 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.5e-24
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 1 

Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          M+KRQVV+++ +SS    +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +   
Sbjct: 1  MKKRQVVIKQRKSSYTMTSSS---SNVRYVECQKNHAANIGGYAVDGCREFMASGGDD-- 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSN 95
           ALTCAACGCHRNFHRR+ V TEVVC+ S   +N
Sbjct: 61 -ALTCAACGCHRNFHRRE-VDTEVVCEYSPPNAN 87

[Close]
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match: MIF1_ARATH (Mini zinc finger protein 1 OS=Arabidopsis thaliana GN=MIF1 PE=1 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 1.0e-23
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1 

Query: 1  MRKRQVVVRREE---------SSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREF 60
          M+KRQ+V+++           ++  S +SS  + +VRY ECQKNHAA +GGYAVDGCREF
Sbjct: 2  MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61 MASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCS 90
          MA+G EGT  AL CAACGCHRNFHR++ V TEVVC+ S
Sbjct: 62 MAAGVEGTVDALRCAACGCHRNFHRKE-VDTEVVCEYS 98

[Close]
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match: MIF1_ORYSJ (Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica GN=MIF1 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 27  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVC 86
           VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+       C
Sbjct: 33  VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAEC 92

Query: 87  DCSSSPSNG 96
           DCSS  S+G
Sbjct: 93  DCSSDTSSG 101

[Close]
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match: MIF1_ORYSI (Mini zinc finger protein 1 OS=Oryza sativa subsp. indica GN=MIF1 PE=3 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-23
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 1 

Query: 27  VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVC 86
           VRY ECQ+NHAA +GG+AVDGCREFMASG EGT AAL CAACGCHR+FHRR+       C
Sbjct: 33  VRYRECQRNHAASIGGHAVDGCREFMASGAEGTAAALLCAACGCHRSFHRREVEAAAAEC 92

Query: 87  DCSSSPSNG 96
           DCSS  S+G
Sbjct: 93  DCSSDTSSG 101

[Close]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match: A0A0A0KVJ7_CUCSA (Transcription factor OS=Cucumis sativus GN=Csa_5G636500 PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 9.1e-40
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 1 

Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EESSRDSVASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEESSRDSVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSP 93
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSP
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSP 92

[Close]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match: A0A061EGD2_THECC (Mini zinc finger 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 45  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 104

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 105 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 139

[Close]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match: A0A061EEU8_THECC (Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 1.7e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 42  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 101

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 102 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 136

[Close]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match: W9QMA1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013609 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.4e-35
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVVVRR EE  R S  SS++VR+VRYGECQKNHAAGVGGYAVDGCREFMASG+EGT
Sbjct: 1  MRKRQVVVRRSEEPLRSSANSSMSVRNVRYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
          + ALTCAACGCHRNFHRR+   TEVVC+CSS  SNGA
Sbjct: 61 SGALTCAACGCHRNFHRREVETTEVVCECSSPSSNGA 97

[Close]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match: A0A067GB00_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043591mg PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.8e-35
Identity = 78/93 (83.87%), Postives = 85/93 (91.40%), Query Frame = 1 

Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          MRKRQVV+RREE SR+S ASS+TVRSVRY ECQKNHAAGVGGYAVDGCREFMASG+EGT 
Sbjct: 1  MRKRQVVLRREEPSRNSTASSVTVRSVRYAECQKNHAAGVGGYAVDGCREFMASGEEGTA 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPS 94
          AALTCAACGCHR+FHRR+ V TEVVC+CSS  S
Sbjct: 61 AALTCAACGCHRSFHRRE-VDTEVVCECSSPSS 92

[Close]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match: AT3G28917.1 (AT3G28917.1 mini zinc finger 2)

HSP 1 Score: 145.6 bits (366), Expect = 1.6e-35
Identity = 79/100 (79.00%), Postives = 86/100 (86.00%), Query Frame = 1 

Query: 1  MRKRQVVVRR---EESSRDS-VASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMAS-G 60
          MRKRQVV+RR   EE SR S  ASSLTVR+VRYGECQKNHAA VGGYAVDGCREFMAS G
Sbjct: 1  MRKRQVVLRRASPEEPSRSSSTASSLTVRTVRYGECQKNHAAAVGGYAVDGCREFMASRG 60

Query: 61 DEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
          +EGT AALTCAACGCHR+FHRR+ + TEVVCDC+S PS G
Sbjct: 61 EEGTVAALTCAACGCHRSFHRRE-IETEVVCDCNSPPSTG 99

[Close]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match: AT1G18835.1 (AT1G18835.1 mini zinc finger)

HSP 1 Score: 111.7 bits (278), Expect = 2.5e-25
Identity = 60/94 (63.83%), Postives = 72/94 (76.60%), Query Frame = 1 

Query: 1  MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
          M+KRQVV+++ +SS    +SS    +VRY ECQKNHAA +GGYAVDGCREFMASG +   
Sbjct: 1  MKKRQVVIKQRKSSYTMTSSS---SNVRYVECQKNHAANIGGYAVDGCREFMASGGDD-- 60

Query: 61 AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSN 95
           ALTCAACGCHRNFHRR+ V TEVVC+ S   +N
Sbjct: 61 -ALTCAACGCHRNFHRRE-VDTEVVCEYSPPNAN 87

[Close]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match: AT1G74660.1 (AT1G74660.1 mini zinc finger 1)

HSP 1 Score: 110.5 bits (275), Expect = 5.7e-25
Identity = 57/98 (58.16%), Postives = 72/98 (73.47%), Query Frame = 1 

Query: 1  MRKRQVVVRREE---------SSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREF 60
          M+KRQ+V+++           ++  S +SS  + +VRY ECQKNHAA +GGYAVDGCREF
Sbjct: 2  MKKRQMVIKQRSRNSNTSSSWTTTSSSSSSSEISNVRYVECQKNHAANIGGYAVDGCREF 61

Query: 61 MASGDEGTNAALTCAACGCHRNFHRRQAVGTEVVCDCS 90
          MA+G EGT  AL CAACGCHRNFHR++ V TEVVC+ S
Sbjct: 62 MAAGVEGTVDALRCAACGCHRNFHRKE-VDTEVVCEYS 98

[Close]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match: AT4G24660.1 (AT4G24660.1 homeobox protein 22)

HSP 1 Score: 85.9 bits (211), Expect = 1.5e-17
Identity = 36/52 (69.23%), Postives = 43/52 (82.69%), Query Frame = 1 

Query: 27 VRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQ 79
          +RY EC KNHA  +GG+AVDGC EFM SG++GT  AL CAACGCHRNFHR++
Sbjct: 47 IRYRECLKNHAVNIGGHAVDGCCEFMPSGEDGTLDALKCAACGCHRNFHRKE 98

[Close]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match: AT3G50890.1 (AT3G50890.1 homeobox protein 28)

HSP 1 Score: 85.1 bits (209), Expect = 2.5e-17
Identity = 36/57 (63.16%), Postives = 43/57 (75.44%), Query Frame = 1 

Query: 25  RSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTNAALTCAACGCHRNFHRRQAVG 82
           +  +Y ECQKNHAA  GG+ VDGC EFMA G+EGT  AL CAAC CHR+FHR++  G
Sbjct: 56  QGAKYRECQKNHAASTGGHVVDGCCEFMAGGEEGTLGALKCAACNCHRSFHRKEVYG 112

[Close]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match: gi|659118799|ref|XP_008459312.1| (PREDICTED: mini zinc finger protein 2 [Cucumis melo])

HSP 1 Score: 173.3 bits (438), Expect = 2.0e-40
Identity = 88/96 (91.67%), Postives = 90/96 (93.75%), Query Frame = 1 

Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EE SRD+VASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEEPSRDTVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNG 96
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSPSNG
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSPSNG 95

[Close]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match: gi|449461927|ref|XP_004148693.1| (PREDICTED: mini zinc finger protein 2 [Cucumis sativus])

HSP 1 Score: 170.6 bits (431), Expect = 1.3e-39
Identity = 87/93 (93.55%), Postives = 88/93 (94.62%), Query Frame = 1 

Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVV+RR EESSRDSVASS TVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT
Sbjct: 1  MRKRQVVLRRSEESSRDSVASSFTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSP 93
           A LTCAACGCHRNFHRRQ VGTEVVCDCSSSP
Sbjct: 61 TAGLTCAACGCHRNFHRRQ-VGTEVVCDCSSSP 92

[Close]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match: gi|590649967|ref|XP_007032531.1| (Mini zinc finger 2 isoform 2, partial [Theobroma cacao])

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 45  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 104

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 105 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 139

[Close]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match: gi|590649964|ref|XP_007032530.1| (Mini zinc finger 2 isoform 1 [Theobroma cacao])

HSP 1 Score: 166.4 bits (420), Expect = 2.5e-38
Identity = 82/96 (85.42%), Postives = 88/96 (91.67%), Query Frame = 1 

Query: 1   MRKRQVVVRREESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGTN 60
           MRKRQVVVRREE  R +  SSLT+RSVRYGECQKNHAAGVGGYAVDGCREFMASG+EGT+
Sbjct: 42  MRKRQVVVRREEPPRSTTNSSLTIRSVRYGECQKNHAAGVGGYAVDGCREFMASGEEGTS 101

Query: 61  AALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
           AALTCAACGCHRNFHRR+ V TEVVC+CSS PSNGA
Sbjct: 102 AALTCAACGCHRNFHRRE-VETEVVCECSSPPSNGA 136

[Close]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match: gi|703068159|ref|XP_010088164.1| (hypothetical protein L484_013609 [Morus notabilis])

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-35
Identity = 78/97 (80.41%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 1  MRKRQVVVRR-EESSRDSVASSLTVRSVRYGECQKNHAAGVGGYAVDGCREFMASGDEGT 60
          MRKRQVVVRR EE  R S  SS++VR+VRYGECQKNHAAGVGGYAVDGCREFMASG+EGT
Sbjct: 1  MRKRQVVVRRSEEPLRSSANSSMSVRNVRYGECQKNHAAGVGGYAVDGCREFMASGEEGT 60

Query: 61 NAALTCAACGCHRNFHRRQAVGTEVVCDCSSSPSNGA 97
          + ALTCAACGCHRNFHRR+   TEVVC+CSS  SNGA
Sbjct: 61 SGALTCAACGCHRNFHRREVETTEVVCECSSPSSNGA 97

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g22950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MIF2_ARATH2.8e-3479.00Mini zinc finger protein 2 OS=Arabidopsis thaliana GN=MIF2 PE=1 SV=1[more]
MIF3_ARATH4.5e-2463.83Mini zinc finger protein 3 OS=Arabidopsis thaliana GN=MIF3 PE=1 SV=1[more]
MIF1_ARATH1.0e-2358.16Mini zinc finger protein 1 OS=Arabidopsis thaliana GN=MIF1 PE=1 SV=1[more]
MIF1_ORYSJ1.7e-2371.01Mini zinc finger protein 1 OS=Oryza sativa subsp. japonica GN=MIF1 PE=3 SV=1[more]
MIF1_ORYSI1.7e-2371.01Mini zinc finger protein 1 OS=Oryza sativa subsp. indica GN=MIF1 PE=3 SV=1[more]
BLAST of Cp4.1LG01g22950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVJ7_CUCSA9.1e-4093.55Transcription factor OS=Cucumis sativus GN=Csa_5G636500 PE=4 SV=1[more]
A0A061EGD2_THECC1.7e-3885.42Mini zinc finger 2 isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_018545 PE=4 SV... [more]
A0A061EEU8_THECC1.7e-3885.42Mini zinc finger 2 isoform 1 OS=Theobroma cacao GN=TCM_018545 PE=4 SV=1[more]
W9QMA1_9ROSA1.4e-3580.41Uncharacterized protein OS=Morus notabilis GN=L484_013609 PE=4 SV=1[more]
A0A067GB00_CITSI1.8e-3583.87Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g043591mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g22950 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G28917.11.6e-3579.00 mini zinc finger 2[more]
AT1G18835.12.5e-2563.83 mini zinc finger[more]
AT1G74660.15.7e-2558.16 mini zinc finger 1[more]
AT4G24660.11.5e-1769.23 homeobox protein 22[more]
AT3G50890.12.5e-1763.16 homeobox protein 28[more]
BLAST of Cp4.1LG01g22950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659118799|ref|XP_008459312.1|2.0e-4091.67PREDICTED: mini zinc finger protein 2 [Cucumis melo][more]
gi|449461927|ref|XP_004148693.1|1.3e-3993.55PREDICTED: mini zinc finger protein 2 [Cucumis sativus][more]
gi|590649967|ref|XP_007032531.1|2.5e-3885.42Mini zinc finger 2 isoform 2, partial [Theobroma cacao][more]
gi|590649964|ref|XP_007032530.1|2.5e-3885.42Mini zinc finger 2 isoform 1 [Theobroma cacao][more]
gi|703068159|ref|XP_010088164.1|2.0e-3580.41hypothetical protein L484_013609 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006456ZF_HD_homeobox_Cys/His_dimer
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g22950.1Cp4.1LG01g22950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPRODOMPD125774coord: 22..93
score: 3.0
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 27..79
score: 3.6
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMsTIGR01566TIGR01566coord: 28..78
score: 3.4
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROFILEPS51523ZF_HD_DIMERcoord: 29..78
score: 25
NoneNo IPR availablePANTHERPTHR31948FAMILY NOT NAMEDcoord: 1..96
score: 1.5
NoneNo IPR availablePANTHERPTHR31948:SF12MINI ZINC FINGER PROTEIN 2coord: 1..96
score: 1.5

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g22950Cucsa.112770Cucumber (Gy14) v1cgycpeB0255
Cp4.1LG01g22950Cucsa.158330Cucumber (Gy14) v1cgycpeB0425
Cp4.1LG01g22950CmaCh04G027640Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g22950CmaCh15G002730Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g22950CmaCh01G007850Cucurbita maxima (Rimu)cmacpeB479
Cp4.1LG01g22950CmoCh01G008240Cucurbita moschata (Rifu)cmocpeB437
Cp4.1LG01g22950CmoCh15G002870Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g22950CmoCh04G028940Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g22950Cla010331Watermelon (97103) v1cpewmB381
Cp4.1LG01g22950Cla018609Watermelon (97103) v1cpewmB449
Cp4.1LG01g22950Csa5G636500Cucumber (Chinese Long) v2cpecuB415
Cp4.1LG01g22950MELO3C001982Melon (DHL92) v3.5.1cpemeB391
Cp4.1LG01g22950MELO3C021987Melon (DHL92) v3.5.1cpemeB358
Cp4.1LG01g22950ClCG09G018240Watermelon (Charleston Gray)cpewcgB344
Cp4.1LG01g22950ClCG04G012260Watermelon (Charleston Gray)cpewcgB387
Cp4.1LG01g22950CSPI05G28890Wild cucumber (PI 183967)cpecpiB414
Cp4.1LG01g22950CSPI01G05620Wild cucumber (PI 183967)cpecpiB380
Cp4.1LG01g22950Lsi02G014850Bottle gourd (USVL1VR-Ls)cpelsiB336
Cp4.1LG01g22950Lsi02G000720Bottle gourd (USVL1VR-Ls)cpelsiB330
Cp4.1LG01g22950MELO3C021987.2Melon (DHL92) v3.6.1cpemedB418
Cp4.1LG01g22950MELO3C001982.2Melon (DHL92) v3.6.1cpemedB455
Cp4.1LG01g22950CsaV3_5G038010Cucumber (Chinese Long) v3cpecucB0517
Cp4.1LG01g22950CsaV3_1G005490Cucumber (Chinese Long) v3cpecucB0472
Cp4.1LG01g22950Bhi08G000977Wax gourdcpewgoB0552
Cp4.1LG01g22950Bhi06G000336Wax gourdcpewgoB0502
Cp4.1LG01g22950CsGy5G028270Cucumber (Gy14) v2cgybcpeB625
Cp4.1LG01g22950Carg04382Silver-seed gourdcarcpeB0965
Cp4.1LG01g22950Carg02251Silver-seed gourdcarcpeB0374
Cp4.1LG01g22950Carg21671Silver-seed gourdcarcpeB0070
Cp4.1LG01g22950Carg10410Silver-seed gourdcarcpeB0509
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g22950Cp4.1LG13g08420Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g22950Cp4.1LG02g10370Cucurbita pepo (Zucchini)cpecpeB391
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g22950Cucumber (Chinese Long) v3cpecucB0495
Cp4.1LG01g22950Cucumber (Chinese Long) v3cpecucB0534
Cp4.1LG01g22950Wax gourdcpewgoB0573
Cp4.1LG01g22950Cucurbita pepo (Zucchini)cpecpeB039
Cp4.1LG01g22950Cucurbita pepo (Zucchini)cpecpeB347
Cp4.1LG01g22950Cucurbita pepo (Zucchini)cpecpeB397
Cp4.1LG01g22950Cucumber (Chinese Long) v2cpecuB380
Cp4.1LG01g22950Melon (DHL92) v3.5.1cpemeB386
Cp4.1LG01g22950Cucumber (Gy14) v2cgybcpeB643
Cp4.1LG01g22950Melon (DHL92) v3.6.1cpemedB447
Cp4.1LG01g22950Melon (DHL92) v3.6.1cpemedB474
Cp4.1LG01g22950Silver-seed gourdcarcpeB0612