Cp4.1LG01g21890.1 (mRNA) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21890.1
TypemRNA
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDehydration-responsive element-binding protein 2C
LocationCp4.1LG01 : 20579047 .. 20580210 (+)
Sequence length891
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGTAAAGCTCCAGCGAAAGGATCTAAGAAGGGATGTATGAAAGGTAAAGGTGGACCCATGAATTCAAATTGTAAATACAGAGGTGTGAGGCAGAGGACTTGGGGGAAATGGGTTGCGGAGATTCGTGAGCCTGATAGAGGTAGTAGGCTGTGGCTTGGTACTTTCTCTAATGCCATTGAAGCTGCTCTCGCCTATGACGAGGCTGCCAGGACCATGTATGGCCAGACTGCTCGTTTGAACCTTCCCAACATTACAAACACACGGCTGCTAGCAGGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

mRNA sequence

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Coding sequence (CDS)

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Protein sequence

MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGREEDLNATTDDFARYLNYEMGGLGF
Homology
[Close]
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match: A0A0A0KBP3_CUCSA (Dehydration-responsive element-binding protein 2C OS=Cucumis sativus GN=Csa_6G012810 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 149 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 208

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 209 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 268

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 269 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 328

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 329 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 388

[Close]
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match: M1T7T4_CAMSI (ERF transcription factor ERF1 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1 

Query: 99  GEPRTGFPVDHVA---TSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND 158
           G+  T  P   V+   T++I ++ C     +  ++ ++   + H  + ++  +  + T  
Sbjct: 161 GKESTSLPTTSVSDSTTTSIQSEVCAS---EDLMVNLDALKVKHEDDNRLSTICSVST-- 220

Query: 159 IAMPVSLEK-KVKHESVDGEYPDRNSDPFDIQDVLQDFQID-EMFDVEELLSIINSDSMH 218
              P+S+ K K+K E VD       S+    Q+  Q+F  D EMFDV+ELL  + S S+H
Sbjct: 221 ---PMSVVKDKIKEEPVDFNV---ESELGYGQNYPQNFTFDDEMFDVDELLGALGSTSVH 280

Query: 219 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 278
           D   L G   D N      PS LS Q + PD KLLGSL HMEQ P+ V++GFDFL+ GR+
Sbjct: 281 DLGSL-GQSLDYNKFNGEMPSDLSYQLQNPDAKLLGSLHHMEQVPSAVDYGFDFLRPGRQ 340

Query: 279 EDLNATTDDFARYLNYEMGGLG 296
           ED N   DDF  YL+ +   LG
Sbjct: 341 EDHNFALDDFG-YLDLDYSDLG 349

[Close]
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match: D8VD30_ACTDE (Ethylene response factor 3 OS=Actinidia deliciosa GN=ERF3 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.2e-15
Identity = 58/136 (42.65%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 151 LRTNDIAMPVSLEKKVKHESVD----GEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSI 210
           L +N++ M  +++++V  E V+    GE  +    P  +  +L+DF +DE FDVEELL I
Sbjct: 205 LASNNMPM-TAVKEEVNDEPVEFNGKGEQMELIGKP-SLDYILEDFSLDETFDVEELLGI 264

Query: 211 INSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFD 270
           ++           G   D  N    +PS LS Q + PD KLLGSL HMEQAP  V++G D
Sbjct: 265 LDE---------MGQSSDRINFQGEKPSDLSYQLQNPDAKLLGSLNHMEQAPPVVDYGLD 324

Query: 271 FLKEGREEDLNATTDD 283
           FLK GREED N   DD
Sbjct: 325 FLKPGREEDFNFALDD 329

[Close]
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match: W6FTE3_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB2A PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-14
Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 1 

Query: 159 PVSLEKKVKHESVDGEYPDRN-SDPFDIQDVLQDFQIDEMFDVEELLSII--NSDSMHDQ 218
           P   + + K E +D E  DR+ +D   +   LQ F +DEMFDV+ELL ++  N+DS+ D 
Sbjct: 226 PKCFKTEAKDELMDIE--DRSWADVCGVDGDLQSFTMDEMFDVDELLGLMDKNTDSVEDL 285

Query: 219 SFLQGN---VYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 278
            +       + D+NN+   + S+LS Q   PD KLLGSL HME AP+ V++ FDFLK G 
Sbjct: 286 CYNNAGQPVLSDNNNLQCDKSSNLSYQLENPDAKLLGSLHHMEHAPSGVDYSFDFLKPGI 345

Query: 279 EEDLNATTDDFARYLNYEMGGLGF 297
            ED +   DD   YLN  +   GF
Sbjct: 346 LEDNDVGIDD-QGYLNLGISDYGF 366

[Close]
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match: F6HCA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01960 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-12
Identity = 83/263 (31.56%), Postives = 122/263 (46.39%), Query Frame = 1 

Query: 50  DDGSKPIRSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIE-GEPRTGFPVD 109
           D  S P  S SD      +TTT+SN S+VC  E+   + +PV P +K E GE  +G    
Sbjct: 129 DSSSAPTTSVSD------STTTTSNYSEVCAYED---SKKPVLPSIKHESGEGESGISGG 188

Query: 110 HV-----ATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLE 169
            +     A  A       QG     +         +  N  +D M             L+
Sbjct: 189 MLSAVVKAEPATPVSLVTQGGGNDPV---------NVGNEPVDAM------------KLQ 248

Query: 170 KKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSM----------H 229
            +    S+D  Y  +N D    QD L+ F +DEMFDV+E L  I+SD +          H
Sbjct: 249 HEENGHSLDAMY-FKNED--GGQDFLEGFPMDEMFDVDEFLRAIDSDPLASYGTRQELGH 308

Query: 230 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 289
           D    Q   ++++NM   +P+ LS Q + PD KLLGSL HMEQ P+D ++ + FL+ G++
Sbjct: 309 DSG--QVGSFETDNMQWEKPTDLSYQLQNPDAKLLGSLNHMEQVPSDFDYCYGFLQPGKQ 355

Query: 290 EDLNATTDDFARYLNYEMGGLGF 297
            D     +D    L+ E+  +GF
Sbjct: 369 LDPCIGLND-QGLLDLELSDMGF 355

[Close]
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match: gi|449441576|ref|XP_004138558.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 149 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 208

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 209 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 268

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 269 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 328

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 329 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 388

[Close]
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match: gi|778709569|ref|XP_011656418.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 164 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 223

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 224 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 283

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 284 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 343

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 344 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 403

[Close]
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match: gi|659081728|ref|XP_008441483.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 137/269 (50.93%), Postives = 169/269 (62.83%), Query Frame = 1 

Query: 60  SDSSTTTST----TTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTST    TTT+SNQS+VCV EE T+ PQ VP +VK E   GE RTG   D  AT
Sbjct: 149 SDSSTTTSTCSESTTTTSNQSEVCVPEEFTVRPQLVPLNVKSEDGEGESRTGDHGDETAT 208

Query: 120 -----SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND----IAMPVSLE 179
                + +  + C   N Q A L  EFP LD   NFQM E+FE RT      +  P+SLE
Sbjct: 209 PMCLENQVKHEDC---NGQTAALVAEFPCLDQLQNFQMAEIFEPRTGPQTGPMLTPLSLE 268

Query: 180 KKVKHESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS 239
           K+VK E +D  Y +R+ D   + +        LQ+F++DEMFDVEELLS+I+SDS+HD +
Sbjct: 269 KQVKDEDLDAVYRERSDDQAVLSEAGISSLYDLQNFEMDEMFDVEELLSLISSDSLHDPT 328

Query: 240 -FLQGNVYDSNNMVPPQ--------PSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDF 297
             L+GN     +MVP Q        P + S Q + PD KLLGS Q ME+ PADV++GFDF
Sbjct: 329 NILKGNADGYTSMVPSQVGSIGSEKPPNSSYQMQNPDAKLLGSPQQMERTPADVDYGFDF 388

[Close]
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match: gi|659081726|ref|XP_008441482.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 137/269 (50.93%), Postives = 169/269 (62.83%), Query Frame = 1 

Query: 60  SDSSTTTST----TTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTST    TTT+SNQS+VCV EE T+ PQ VP +VK E   GE RTG   D  AT
Sbjct: 164 SDSSTTTSTCSESTTTTSNQSEVCVPEEFTVRPQLVPLNVKSEDGEGESRTGDHGDETAT 223

Query: 120 -----SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND----IAMPVSLE 179
                + +  + C   N Q A L  EFP LD   NFQM E+FE RT      +  P+SLE
Sbjct: 224 PMCLENQVKHEDC---NGQTAALVAEFPCLDQLQNFQMAEIFEPRTGPQTGPMLTPLSLE 283

Query: 180 KKVKHESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS 239
           K+VK E +D  Y +R+ D   + +        LQ+F++DEMFDVEELLS+I+SDS+HD +
Sbjct: 284 KQVKDEDLDAVYRERSDDQAVLSEAGISSLYDLQNFEMDEMFDVEELLSLISSDSLHDPT 343

Query: 240 -FLQGNVYDSNNMVPPQ--------PSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDF 297
             L+GN     +MVP Q        P + S Q + PD KLLGS Q ME+ PADV++GFDF
Sbjct: 344 NILKGNADGYTSMVPSQVGSIGSEKPPNSSYQMQNPDAKLLGSPQQMERTPADVDYGFDF 403

[Close]
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match: gi|459021321|gb|AGG39692.1| (ERF transcription factor ERF1 [Camellia sinensis])

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1 

Query: 99  GEPRTGFPVDHVA---TSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND 158
           G+  T  P   V+   T++I ++ C     +  ++ ++   + H  + ++  +  + T  
Sbjct: 161 GKESTSLPTTSVSDSTTTSIQSEVCAS---EDLMVNLDALKVKHEDDNRLSTICSVST-- 220

Query: 159 IAMPVSLEK-KVKHESVDGEYPDRNSDPFDIQDVLQDFQID-EMFDVEELLSIINSDSMH 218
              P+S+ K K+K E VD       S+    Q+  Q+F  D EMFDV+ELL  + S S+H
Sbjct: 221 ---PMSVVKDKIKEEPVDFNV---ESELGYGQNYPQNFTFDDEMFDVDELLGALGSTSVH 280

Query: 219 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 278
           D   L G   D N      PS LS Q + PD KLLGSL HMEQ P+ V++GFDFL+ GR+
Sbjct: 281 DLGSL-GQSLDYNKFNGEMPSDLSYQLQNPDAKLLGSLHHMEQVPSAVDYGFDFLRPGRQ 340

Query: 279 EDLNATTDDFARYLNYEMGGLG 296
           ED N   DDF  YL+ +   LG
Sbjct: 341 EDHNFALDDFG-YLDLDYSDLG 349

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21890.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g21890.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBP3_CUCSA2.4e-5152.27Dehydration-responsive element-binding protein 2C OS=Cucumis sativus GN=Csa_6G01... [more]
M1T7T4_CAMSI1.0e-1736.63ERF transcription factor ERF1 OS=Camellia sinensis PE=2 SV=1[more]
D8VD30_ACTDE8.2e-1542.65Ethylene response factor 3 OS=Actinidia deliciosa GN=ERF3 PE=2 SV=1[more]
W6FTE3_9ROSA7.0e-1441.67Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
F6HCA2_VITVI5.0e-1231.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01960 PE=4 SV=... [more]
BLAST of Cp4.1LG01g21890.1 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g21890.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441576|ref|XP_004138558.1|3.5e-5152.27PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis... [more]
gi|778709569|ref|XP_011656418.1|3.5e-5152.27PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis... [more]
gi|659081728|ref|XP_008441483.1|5.6e-4950.93PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis... [more]
gi|659081726|ref|XP_008441482.1|5.6e-4950.93PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis... [more]
gi|459021321|gb|AGG39692.1|1.5e-1736.63ERF transcription factor ERF1 [Camellia sinensis][more]
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Cp4.1LG01g21890Cp4.1LG01g21890gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Cp4.1LG01g21890.1:cds:002Cp4.1LG01g21890.1:cds:002CDS
Cp4.1LG01g21890.1:cds:001Cp4.1LG01g21890.1:cds:001CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Cp4.1LG01g21890.1Cp4.1LG01g21890.1-proteinpolypeptide