Cp4.1LG01g21890 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21890
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDehydration-responsive element-binding protein 2C
LocationCp4.1LG01 : 20579047 .. 20580210 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGTAAAGCTCCAGCGAAAGGATCTAAGAAGGGATGTATGAAAGGTAAAGGTGGACCCATGAATTCAAATTGTAAATACAGAGGTGTGAGGCAGAGGACTTGGGGGAAATGGGTTGCGGAGATTCGTGAGCCTGATAGAGGTAGTAGGCTGTGGCTTGGTACTTTCTCTAATGCCATTGAAGCTGCTCTCGCCTATGACGAGGCTGCCAGGACCATGTATGGCCAGACTGCTCGTTTGAACCTTCCCAACATTACAAACACACGGCTGCTAGCAGGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

mRNA sequence

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Coding sequence (CDS)

ATGAGTCTGGGTAATCGATATTCTGACGCAATTTCTTTACCTACCAAACGAATTAGGAAGAGGAAGTCACGGAGTAGACGAGATCCATCGACCGTGGCTGAGACTCTTGCTAAGTGGAAGGCTTATAATGAATGTGTTAATTCTTGTGATGATGGAAGCAAGCCAATTCGCTCTGCCTCGGATTCTTCAACCACCACGTCGACGACAACCACATCATCGAACCAATCTGATGTCTGTGTGTCTGAGGAGCTTACACTGACGCCACAACCTGTCCCCCCAGACGTTAAGATCGAAGGTGAGCCAAGGACCGGGTTCCCAGTTGATCACGTTGCGACATCGGCGATCGATGCTAAATTTTGTGACCAAGGCAATGATCAGGCAGCTCTGTTGGGGATTGAATTTCCCAGTTTGGATCACTTCCCGAACTTTCAAATGGATGAAATGTTCGAGTTGAGGACTAATGACATTGCAATGCCGGTGAGCTTAGAGAAGAAAGTGAAGCATGAAAGTGTCGATGGCGAATATCCCGATCGGAACAGTGATCCATTCGACATCCAGGATGTGCTGCAGGACTTTCAAATAGATGAAATGTTTGATGTGGAGGAGCTTCTAAGCATTATAAATAGTGATTCCATGCATGATCAAAGCTTCTTGCAAGGGAATGTGTATGATTCTAACAACATGGTGCCTCCCCAACCATCAAGCTTATCGAATCAGTTCCGATACCCCGACGAGAAGCTGCTCGGAAGCCTTCAACACATGGAGCAAGCTCCAGCCGACGTCAATCATGGGTTCGATTTCCTGAAGGAGGGGAGGGAGGAGGATCTGAATGCTACAACAGATGATTTTGCAAGATACTTGAATTATGAGATGGGTGGTTTGGGTTTCTGA

Protein sequence

MSLGNRYSDAISLPTKRIRKRKSRSRRDPSTVAETLAKWKAYNECVNSCDDGSKPIRSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIEGEPRTGFPVDHVATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLEKKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGREEDLNATTDDFARYLNYEMGGLGF
Homology
[Close]
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match: A0A0A0KBP3_CUCSA (Dehydration-responsive element-binding protein 2C OS=Cucumis sativus GN=Csa_6G012810 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.4e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 149 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 208

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 209 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 268

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 269 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 328

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 329 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 388

[Close]
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match: M1T7T4_CAMSI (ERF transcription factor ERF1 OS=Camellia sinensis PE=2 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 1.0e-17
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1 

Query: 99  GEPRTGFPVDHVA---TSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND 158
           G+  T  P   V+   T++I ++ C     +  ++ ++   + H  + ++  +  + T  
Sbjct: 161 GKESTSLPTTSVSDSTTTSIQSEVCAS---EDLMVNLDALKVKHEDDNRLSTICSVST-- 220

Query: 159 IAMPVSLEK-KVKHESVDGEYPDRNSDPFDIQDVLQDFQID-EMFDVEELLSIINSDSMH 218
              P+S+ K K+K E VD       S+    Q+  Q+F  D EMFDV+ELL  + S S+H
Sbjct: 221 ---PMSVVKDKIKEEPVDFNV---ESELGYGQNYPQNFTFDDEMFDVDELLGALGSTSVH 280

Query: 219 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 278
           D   L G   D N      PS LS Q + PD KLLGSL HMEQ P+ V++GFDFL+ GR+
Sbjct: 281 DLGSL-GQSLDYNKFNGEMPSDLSYQLQNPDAKLLGSLHHMEQVPSAVDYGFDFLRPGRQ 340

Query: 279 EDLNATTDDFARYLNYEMGGLG 296
           ED N   DDF  YL+ +   LG
Sbjct: 341 EDHNFALDDFG-YLDLDYSDLG 349

[Close]
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match: D8VD30_ACTDE (Ethylene response factor 3 OS=Actinidia deliciosa GN=ERF3 PE=2 SV=1)

HSP 1 Score: 89.4 bits (220), Expect = 8.2e-15
Identity = 58/136 (42.65%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 151 LRTNDIAMPVSLEKKVKHESVD----GEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSI 210
           L +N++ M  +++++V  E V+    GE  +    P  +  +L+DF +DE FDVEELL I
Sbjct: 205 LASNNMPM-TAVKEEVNDEPVEFNGKGEQMELIGKP-SLDYILEDFSLDETFDVEELLGI 264

Query: 211 INSDSMHDQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFD 270
           ++           G   D  N    +PS LS Q + PD KLLGSL HMEQAP  V++G D
Sbjct: 265 LDE---------MGQSSDRINFQGEKPSDLSYQLQNPDAKLLGSLNHMEQAPPVVDYGLD 324

Query: 271 FLKEGREEDLNATTDD 283
           FLK GREED N   DD
Sbjct: 325 FLKPGREEDFNFALDD 329

[Close]
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match: W6FTE3_9ROSA (Dehydration responsive element binding transcription factor OS=Morus notabilis GN=DREB2A PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 7.0e-14
Identity = 60/144 (41.67%), Postives = 83/144 (57.64%), Query Frame = 1 

Query: 159 PVSLEKKVKHESVDGEYPDRN-SDPFDIQDVLQDFQIDEMFDVEELLSII--NSDSMHDQ 218
           P   + + K E +D E  DR+ +D   +   LQ F +DEMFDV+ELL ++  N+DS+ D 
Sbjct: 226 PKCFKTEAKDELMDIE--DRSWADVCGVDGDLQSFTMDEMFDVDELLGLMDKNTDSVEDL 285

Query: 219 SFLQGN---VYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 278
            +       + D+NN+   + S+LS Q   PD KLLGSL HME AP+ V++ FDFLK G 
Sbjct: 286 CYNNAGQPVLSDNNNLQCDKSSNLSYQLENPDAKLLGSLHHMEHAPSGVDYSFDFLKPGI 345

Query: 279 EEDLNATTDDFARYLNYEMGGLGF 297
            ED +   DD   YLN  +   GF
Sbjct: 346 LEDNDVGIDD-QGYLNLGISDYGF 366

[Close]
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match: F6HCA2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01960 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-12
Identity = 83/263 (31.56%), Postives = 122/263 (46.39%), Query Frame = 1 

Query: 50  DDGSKPIRSASDSSTTTSTTTTSSNQSDVCVSEELTLTPQPVPPDVKIE-GEPRTGFPVD 109
           D  S P  S SD      +TTT+SN S+VC  E+   + +PV P +K E GE  +G    
Sbjct: 129 DSSSAPTTSVSD------STTTTSNYSEVCAYED---SKKPVLPSIKHESGEGESGISGG 188

Query: 110 HV-----ATSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIAMPVSLE 169
            +     A  A       QG     +         +  N  +D M             L+
Sbjct: 189 MLSAVVKAEPATPVSLVTQGGGNDPV---------NVGNEPVDAM------------KLQ 248

Query: 170 KKVKHESVDGEYPDRNSDPFDIQDVLQDFQIDEMFDVEELLSIINSDSM----------H 229
            +    S+D  Y  +N D    QD L+ F +DEMFDV+E L  I+SD +          H
Sbjct: 249 HEENGHSLDAMY-FKNED--GGQDFLEGFPMDEMFDVDEFLRAIDSDPLASYGTRQELGH 308

Query: 230 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 289
           D    Q   ++++NM   +P+ LS Q + PD KLLGSL HMEQ P+D ++ + FL+ G++
Sbjct: 309 DSG--QVGSFETDNMQWEKPTDLSYQLQNPDAKLLGSLNHMEQVPSDFDYCYGFLQPGKQ 355

Query: 290 EDLNATTDDFARYLNYEMGGLGF 297
            D     +D    L+ E+  +GF
Sbjct: 369 LDPCIGLND-QGLLDLELSDMGF 355

[Close]
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: gi|449441576|ref|XP_004138558.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 149 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 208

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 209 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 268

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 269 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 328

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 329 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 388

[Close]
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: gi|778709569|ref|XP_011656418.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 3.5e-51
Identity = 138/264 (52.27%), Postives = 167/264 (63.26%), Query Frame = 1 

Query: 60  SDSSTTTS----TTTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTS    +TTT+SNQS+VCV EE T+ P+ V  +VK E   GE +TG   D  AT
Sbjct: 164 SDSSTTTSACSESTTTTSNQSEVCVPEEFTMRPRLVSLNVKTEDGEGESKTGDHGDETAT 223

Query: 120 SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTNDIA----MPVSLEKKVKH 179
                K  D+ NDQ   LG EFP LD   NFQMDEMFE RT   A    MPVSLEK+VK 
Sbjct: 224 PMNQVKHEDR-NDQLVALGAEFPCLDQLENFQMDEMFEPRTGTQAGHMVMPVSLEKQVKD 283

Query: 180 ESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS-FLQG 239
           E +D  Y  R+ D   + +        L +FQ+DE+FDVEELLS+INSDS+HD +  ++G
Sbjct: 284 EDLDAVYCGRSDDQAVLSEAGVPSLYDLHNFQMDELFDVEELLSLINSDSLHDPTNIVKG 343

Query: 240 NVYDSNNMVPP--------QPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGR 297
           N     NM P         +P + S Q + PD KLLGS Q ME+ PADV++GFDFLK+GR
Sbjct: 344 NADAYTNMAPSHVGSVGSEKPPNRSYQIQNPDAKLLGSPQQMERTPADVDYGFDFLKQGR 403

[Close]
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: gi|659081728|ref|XP_008441483.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 137/269 (50.93%), Postives = 169/269 (62.83%), Query Frame = 1 

Query: 60  SDSSTTTST----TTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTST    TTT+SNQS+VCV EE T+ PQ VP +VK E   GE RTG   D  AT
Sbjct: 149 SDSSTTTSTCSESTTTTSNQSEVCVPEEFTVRPQLVPLNVKSEDGEGESRTGDHGDETAT 208

Query: 120 -----SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND----IAMPVSLE 179
                + +  + C   N Q A L  EFP LD   NFQM E+FE RT      +  P+SLE
Sbjct: 209 PMCLENQVKHEDC---NGQTAALVAEFPCLDQLQNFQMAEIFEPRTGPQTGPMLTPLSLE 268

Query: 180 KKVKHESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS 239
           K+VK E +D  Y +R+ D   + +        LQ+F++DEMFDVEELLS+I+SDS+HD +
Sbjct: 269 KQVKDEDLDAVYRERSDDQAVLSEAGISSLYDLQNFEMDEMFDVEELLSLISSDSLHDPT 328

Query: 240 -FLQGNVYDSNNMVPPQ--------PSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDF 297
             L+GN     +MVP Q        P + S Q + PD KLLGS Q ME+ PADV++GFDF
Sbjct: 329 NILKGNADGYTSMVPSQVGSIGSEKPPNSSYQMQNPDAKLLGSPQQMERTPADVDYGFDF 388

[Close]
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: gi|659081726|ref|XP_008441482.1| (PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis melo])

HSP 1 Score: 203.4 bits (516), Expect = 5.6e-49
Identity = 137/269 (50.93%), Postives = 169/269 (62.83%), Query Frame = 1 

Query: 60  SDSSTTTST----TTTSSNQSDVCVSEELTLTPQPVPPDVKIE---GEPRTGFPVDHVAT 119
           SDSSTTTST    TTT+SNQS+VCV EE T+ PQ VP +VK E   GE RTG   D  AT
Sbjct: 164 SDSSTTTSTCSESTTTTSNQSEVCVPEEFTVRPQLVPLNVKSEDGEGESRTGDHGDETAT 223

Query: 120 -----SAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND----IAMPVSLE 179
                + +  + C   N Q A L  EFP LD   NFQM E+FE RT      +  P+SLE
Sbjct: 224 PMCLENQVKHEDC---NGQTAALVAEFPCLDQLQNFQMAEIFEPRTGPQTGPMLTPLSLE 283

Query: 180 KKVKHESVDGEYPDRNSDPFDIQDV-------LQDFQIDEMFDVEELLSIINSDSMHDQS 239
           K+VK E +D  Y +R+ D   + +        LQ+F++DEMFDVEELLS+I+SDS+HD +
Sbjct: 284 KQVKDEDLDAVYRERSDDQAVLSEAGISSLYDLQNFEMDEMFDVEELLSLISSDSLHDPT 343

Query: 240 -FLQGNVYDSNNMVPPQ--------PSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDF 297
             L+GN     +MVP Q        P + S Q + PD KLLGS Q ME+ PADV++GFDF
Sbjct: 344 NILKGNADGYTSMVPSQVGSIGSEKPPNSSYQMQNPDAKLLGSPQQMERTPADVDYGFDF 403

[Close]
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match: gi|459021321|gb|AGG39692.1| (ERF transcription factor ERF1 [Camellia sinensis])

HSP 1 Score: 99.0 bits (245), Expect = 1.5e-17
Identity = 74/202 (36.63%), Postives = 108/202 (53.47%), Query Frame = 1 

Query: 99  GEPRTGFPVDHVA---TSAIDAKFCDQGNDQAALLGIEFPSLDHFPNFQMDEMFELRTND 158
           G+  T  P   V+   T++I ++ C     +  ++ ++   + H  + ++  +  + T  
Sbjct: 161 GKESTSLPTTSVSDSTTTSIQSEVCAS---EDLMVNLDALKVKHEDDNRLSTICSVST-- 220

Query: 159 IAMPVSLEK-KVKHESVDGEYPDRNSDPFDIQDVLQDFQID-EMFDVEELLSIINSDSMH 218
              P+S+ K K+K E VD       S+    Q+  Q+F  D EMFDV+ELL  + S S+H
Sbjct: 221 ---PMSVVKDKIKEEPVDFNV---ESELGYGQNYPQNFTFDDEMFDVDELLGALGSTSVH 280

Query: 219 DQSFLQGNVYDSNNMVPPQPSSLSNQFRYPDEKLLGSLQHMEQAPADVNHGFDFLKEGRE 278
           D   L G   D N      PS LS Q + PD KLLGSL HMEQ P+ V++GFDFL+ GR+
Sbjct: 281 DLGSL-GQSLDYNKFNGEMPSDLSYQLQNPDAKLLGSLHHMEQVPSAVDYGFDFLRPGRQ 340

Query: 279 EDLNATTDDFARYLNYEMGGLG 296
           ED N   DDF  YL+ +   LG
Sbjct: 341 EDHNFALDDFG-YLDLDYSDLG 349

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g21890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KBP3_CUCSA2.4e-5152.27Dehydration-responsive element-binding protein 2C OS=Cucumis sativus GN=Csa_6G01... [more]
M1T7T4_CAMSI1.0e-1736.63ERF transcription factor ERF1 OS=Camellia sinensis PE=2 SV=1[more]
D8VD30_ACTDE8.2e-1542.65Ethylene response factor 3 OS=Actinidia deliciosa GN=ERF3 PE=2 SV=1[more]
W6FTE3_9ROSA7.0e-1441.67Dehydration responsive element binding transcription factor OS=Morus notabilis G... [more]
F6HCA2_VITVI5.0e-1231.56Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01960 PE=4 SV=... [more]
BLAST of Cp4.1LG01g21890 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG01g21890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441576|ref|XP_004138558.1|3.5e-5152.27PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis... [more]
gi|778709569|ref|XP_011656418.1|3.5e-5152.27PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis... [more]
gi|659081728|ref|XP_008441483.1|5.6e-4950.93PREDICTED: dehydration-responsive element-binding protein 2C isoform X2 [Cucumis... [more]
gi|659081726|ref|XP_008441482.1|5.6e-4950.93PREDICTED: dehydration-responsive element-binding protein 2C isoform X1 [Cucumis... [more]
gi|459021321|gb|AGG39692.1|1.5e-1736.63ERF transcription factor ERF1 [Camellia sinensis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0046274 lignin catabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0048046 apoplast
molecular_function GO:0003674 molecular_function
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0052716 hydroquinone:oxygen oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21890.1Cp4.1LG01g21890.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21890Cucsa.136780Cucumber (Gy14) v1cgycpeB0364
Cp4.1LG01g21890CmaCh15G001450Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g21890CmaCh04G028910Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21890CmoCh04G030160Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21890CmoCh15G001600Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g21890Cla006605Watermelon (97103) v1cpewmB461
Cp4.1LG01g21890Csa6G012810Cucumber (Chinese Long) v2cpecuB460
Cp4.1LG01g21890MELO3C008318Melon (DHL92) v3.5.1cpemeB400
Cp4.1LG01g21890ClCG11G005990Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g21890CSPI06G01860Wild cucumber (PI 183967)cpecpiB461
Cp4.1LG01g21890Lsi03G002910Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g21890MELO3C008318.2Melon (DHL92) v3.6.1cpemedB465
Cp4.1LG01g21890CsaV3_6G002010Cucumber (Chinese Long) v3cpecucB0569
Cp4.1LG01g21890Bhi04G001868Wax gourdcpewgoB0525
Cp4.1LG01g21890CsGy6G001960Cucumber (Gy14) v2cgybcpeB798
Cp4.1LG01g21890Carg02137Silver-seed gourdcarcpeB0374
Cp4.1LG01g21890Carg05965Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g21890Cp4.1LG13g07480Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21890Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g21890Wax gourdcpewgoB0546
Cp4.1LG01g21890Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g21890Cucurbita pepo (Zucchini)cpecpeB376
Cp4.1LG01g21890Cucumber (Gy14) v1cgycpeB0344
Cp4.1LG01g21890Cucumber (Chinese Long) v2cpecuB413
Cp4.1LG01g21890Watermelon (97103) v1cpewmB445
Cp4.1LG01g21890Melon (DHL92) v3.5.1cpemeB433
Cp4.1LG01g21890Cucumber (Gy14) v2cgybcpeB514
Cp4.1LG01g21890Melon (DHL92) v3.6.1cpemedB505
Cp4.1LG01g21890Silver-seed gourdcarcpeB0786