Cp4.1LG01g17140.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGTGGTTGTGGTTAGTTTGAATGCTGGAAAGTGGTGCCGCCAACTGAATTCATTATGTTCAGGTTCCGGAAAGTAAGAGCATAAGGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGGTCCAGGATGCGGAGCCAAAGTTCTTTATGATGTTGATGAATTAAAGCAATGTTCAAAAAGTGGAATAGTCATAAATCTGAAGGTATTTTCCCATCATACTCACTTCAACCCTTATAGTGTTAGTATTTTCTTTGGTGGCTATGAAGTTTGATATAATATCTCTGCCCTGATGAACAGGGAAATGGTTTATTGGCGGAGGACGAGGGTCGGTTCTCGAATGGAGTCGAGTTTCCATCCGTAACTATGAGA ATGGCAGTTCCGGAAAGTAAGAGCATAAGGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGGTCCAGGATGCGGAGCCAAAGTTCTTTATGATGTTGATGAATTAAAGCAATGTTCAAAAAGTGGAATAGTCATAAATCTGAAGGGAAATGGTTTATTGGCGGAGGACGAGGGTCGGTTCTCGAATGGAGTCGAGTTTCCATCCGTAACTATGAGA ATGGCAGTTCCGGAAAGTAAGAGCATAAGGGCTGTTCTGGTTGATGAAGAAGCTGTTGGATCAGTGGACGGTCCAGGATGCGGAGCCAAAGTTCTTTATGATGTTGATGAATTAAAGCAATGTTCAAAAAGTGGAATAGTCATAAATCTGAAGGGAAATGGTTTATTGGCGGAGGACGAGGGTCGGTTCTCGAATGGAGTCGAGTTTCCATCCGTAACTATGAGA MAVPESKSIRAVLVDEEAVGSVDGPGCGAKVLYDVDELKQCSKSGIVINLKGNGLLAEDEGRFSNGVEFPSVTMR
BLAST of Cp4.1LG01g17140.1 vs. TrEMBL
Match: A0A0A0KR77_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G527380 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 3.3e-21 Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. TAIR10
Match: AT5G49840.1 (AT5G49840.1 ATP-dependent Clp protease) HSP 1 Score: 48.9 bits (115), Expect = 1.6e-06 Identity = 24/35 (68.57%), Postives = 29/35 (82.86%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. NCBI nr
Match: gi|659121295|ref|XP_008460587.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-23 Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. NCBI nr
Match: gi|659121297|ref|XP_008460588.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X3 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-23 Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. NCBI nr
Match: gi|659121299|ref|XP_008460589.1| (PREDICTED: mitochondrial clpX-like chaperone MCX1 isoform X4 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-23 Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. NCBI nr
Match: gi|659121293|ref|XP_008460586.1| (PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 115.9 bits (289), Expect = 3.0e-23 Identity = 55/72 (76.39%), Postives = 63/72 (87.50%), Query Frame = 1
BLAST of Cp4.1LG01g17140.1 vs. NCBI nr
Match: gi|700196222|gb|KGN51399.1| (hypothetical protein Csa_5G527380 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 4.8e-21 Identity = 54/73 (73.97%), Postives = 61/73 (83.56%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
|