Cp4.1LG01g04000.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTCAGAGAAGGAGAGATTTGATTTCCCCGATAGGGACTTGTTAAGGACACAAACATACCGTCTTCTCCTCTGTTTTAACCCTCCCACTTCATAAACCGCTTTATATTACCCTCTTCCATCGCCCCTCTTCTCTTCAACCTTCATCAATATCCCTCTCCCAATCCATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGGTCAGTTCCTACCTTGTTGTAATTTTGATTGTTTCTTGGGAAATTCACTTATGGGTTTTGTTGGGTTTTTTCAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGTAAGTGATCCTGGAATTGTAAATTTGAAGTCTTTTTCTTATGGGTTTTCGTTTATGAACTTTTTGGGACATGGGTTTGTGAAAAAAAACAGAGCTTGAAGGTGGATATGATCATTACCGACTACTGTATGCCCGGAATGACAGGCTACGAATTGCTCAAGAAAATAAAGGTAAAATTTCTAACTTTTGATTGAAATTCGAACAAGGGAAGTGGGAAATGGAGTGTTAAATTGAGTGATGAACAGGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGAGAACATCAGCTCATCATCCCCAAACATCTTCCTCCTCTTTGTTAGTTTTAACGGTTATTAGTTTGAAATCCCAGTTTTGTCACCGTTAAGTGTTGGTGTTTTGGTTACCGCCGTTATTTACTAAACCGCAACGCATTGGGGTTGTCCGATCATTTCGGGGACAAGGCATGAGCCGTGATGTACAATTCATAGAGTTCAATCATATAAATATATATTAAAAAAAAAAAAAAAAAAGATCTATGAATATTTTGTCATTTTGGGGATAATTTTCTTTGGAATTATAAAATTGGTCAATTAATTAAAACATTACAGATAATATAATTCAATT CTCAGAGAAGGAGAGATTTGATTTCCCCGATAGGGACTTGTTAAGGACACAAACATACCGTCTTCTCCTCTGTTTTAACCCTCCCACTTCATAAACCGCTTTATATTACCCTCTTCCATCGCCCCTCTTCTCTTCAACCTTCATCAATATCCCTCTCCCAATCCATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGAGAACATCAGCTCATCATCCCCAAACATCTTCCTCCTCTTTGTTAGTTTTAACGGTTATTAGTTTGAAATCCCAGTTTTGTCACCGTTAAGTGTTGGTGTTTTGGTTACCGCCGTTATTTACTAAACCGCAACGCATTGGGGTTGTCCGATCATTTCGGGGACAAGGCATGAGCCGTGATGTACAATTCATAGAGTTCAATCATATAAATATATATTAAAAAAAAAAAAAAAAAAGATCTATGAATATTTTGTCATTTTGGGGATAATTTTCTTTGGAATTATAAAATTGGTCAATTAATTAAAACATTACAGATAATATAATTCAATT ATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGA MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFDESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSCDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQSDDGSK
BLAST of Cp4.1LG01g04000.1 vs. Swiss-Prot
Match: ARR5_ARATH (Two-component response regulator ARR5 OS=Arabidopsis thaliana GN=ARR5 PE=1 SV=2) HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34 Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. Swiss-Prot
Match: ARR4_ARATH (Two-component response regulator ARR4 OS=Arabidopsis thaliana GN=ARR4 PE=1 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 5.8e-32 Identity = 115/246 (46.75%), Postives = 144/246 (58.54%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. Swiss-Prot
Match: ARR6_ARATH (Two-component response regulator ARR6 OS=Arabidopsis thaliana GN=ARR6 PE=1 SV=2) HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31 Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. Swiss-Prot
Match: ARR3_ARATH (Two-component response regulator ARR3 OS=Arabidopsis thaliana GN=ARR3 PE=2 SV=1) HSP 1 Score: 130.2 bits (326), Expect = 2.7e-29 Identity = 100/227 (44.05%), Postives = 129/227 (56.83%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. Swiss-Prot
Match: ARR15_ARATH (Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29 Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TrEMBL
Match: A0A0A0KQC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603910 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.5e-71 Identity = 176/239 (73.64%), Postives = 186/239 (77.82%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TrEMBL
Match: W9S1Y9_9ROSA (Two-component response regulator OS=Morus notabilis GN=L484_027845 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 5.0e-46 Identity = 142/235 (60.43%), Postives = 160/235 (68.09%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TrEMBL
Match: M5Y0C2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010863mg PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.9e-43 Identity = 133/234 (56.84%), Postives = 152/234 (64.96%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TrEMBL
Match: A0A067JP36_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21755 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 4.3e-42 Identity = 137/241 (56.85%), Postives = 155/241 (64.32%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TrEMBL
Match: A0A0A1WCB3_NICAT (Type A response regulator RRA3 OS=Nicotiana attenuata GN=RRA3 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 4.8e-41 Identity = 122/235 (51.91%), Postives = 159/235 (67.66%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35 Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TAIR10
Match: AT1G10470.1 (AT1G10470.1 response regulator 4) HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33 Identity = 115/246 (46.75%), Postives = 144/246 (58.54%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TAIR10
Match: AT5G62920.1 (AT5G62920.1 response regulator 6) HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32 Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3) HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30 Identity = 100/227 (44.05%), Postives = 129/227 (56.83%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15) HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30 Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. NCBI nr
Match: gi|659090906|ref|XP_008446266.1| (PREDICTED: two-component response regulator ARR5-like [Cucumis melo]) HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73 Identity = 179/239 (74.90%), Postives = 188/239 (78.66%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. NCBI nr
Match: gi|449434875|ref|XP_004135221.1| (PREDICTED: two-component response regulator ARR5 [Cucumis sativus]) HSP 1 Score: 277.3 bits (708), Expect = 2.2e-71 Identity = 176/239 (73.64%), Postives = 186/239 (77.82%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. NCBI nr
Match: gi|703114017|ref|XP_010100530.1| (Two-component response regulator [Morus notabilis]) HSP 1 Score: 192.6 bits (488), Expect = 7.1e-46 Identity = 142/235 (60.43%), Postives = 160/235 (68.09%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. NCBI nr
Match: gi|645279958|ref|XP_008244969.1| (PREDICTED: two-component response regulator ARR5 [Prunus mume]) HSP 1 Score: 187.2 bits (474), Expect = 3.0e-44 Identity = 134/234 (57.26%), Postives = 153/234 (65.38%), Query Frame = 1
BLAST of Cp4.1LG01g04000.1 vs. NCBI nr
Match: gi|596213034|ref|XP_007223876.1| (hypothetical protein PRUPE_ppa010863mg [Prunus persica]) HSP 1 Score: 183.0 bits (463), Expect = 5.6e-43 Identity = 133/234 (56.84%), Postives = 152/234 (64.96%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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