Cp4.1LG01g04000 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g04000
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTwo-component response regulator
LocationCp4.1LG01 : 1524322 .. 1525774 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAGAGAAGGAGAGATTTGATTTCCCCGATAGGGACTTGTTAAGGACACAAACATACCGTCTTCTCCTCTGTTTTAACCCTCCCACTTCATAAACCGCTTTATATTACCCTCTTCCATCGCCCCTCTTCTCTTCAACCTTCATCAATATCCCTCTCCCAATCCATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGGTCAGTTCCTACCTTGTTGTAATTTTGATTGTTTCTTGGGAAATTCACTTATGGGTTTTGTTGGGTTTTTTCAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGTAAGTGATCCTGGAATTGTAAATTTGAAGTCTTTTTCTTATGGGTTTTCGTTTATGAACTTTTTGGGACATGGGTTTGTGAAAAAAAACAGAGCTTGAAGGTGGATATGATCATTACCGACTACTGTATGCCCGGAATGACAGGCTACGAATTGCTCAAGAAAATAAAGGTAAAATTTCTAACTTTTGATTGAAATTCGAACAAGGGAAGTGGGAAATGGAGTGTTAAATTGAGTGATGAACAGGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGAGAACATCAGCTCATCATCCCCAAACATCTTCCTCCTCTTTGTTAGTTTTAACGGTTATTAGTTTGAAATCCCAGTTTTGTCACCGTTAAGTGTTGGTGTTTTGGTTACCGCCGTTATTTACTAAACCGCAACGCATTGGGGTTGTCCGATCATTTCGGGGACAAGGCATGAGCCGTGATGTACAATTCATAGAGTTCAATCATATAAATATATATTAAAAAAAAAAAAAAAAAAGATCTATGAATATTTTGTCATTTTGGGGATAATTTTCTTTGGAATTATAAAATTGGTCAATTAATTAAAACATTACAGATAATATAATTCAATT

mRNA sequence

CTCAGAGAAGGAGAGATTTGATTTCCCCGATAGGGACTTGTTAAGGACACAAACATACCGTCTTCTCCTCTGTTTTAACCCTCCCACTTCATAAACCGCTTTATATTACCCTCTTCCATCGCCCCTCTTCTCTTCAACCTTCATCAATATCCCTCTCCCAATCCATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGAGAACATCAGCTCATCATCCCCAAACATCTTCCTCCTCTTTGTTAGTTTTAACGGTTATTAGTTTGAAATCCCAGTTTTGTCACCGTTAAGTGTTGGTGTTTTGGTTACCGCCGTTATTTACTAAACCGCAACGCATTGGGGTTGTCCGATCATTTCGGGGACAAGGCATGAGCCGTGATGTACAATTCATAGAGTTCAATCATATAAATATATATTAAAAAAAAAAAAAAAAAAGATCTATGAATATTTTGTCATTTTGGGGATAATTTTCTTTGGAATTATAAAATTGGTCAATTAATTAAAACATTACAGATAATATAATTCAATT

Coding sequence (CDS)

ATGGCTAGAACCCCTGTTTTCTCCCGCCGCCGGAGGTCCGATCAAATTGACACTCGAGATCGCTTCCCCACTTCTGATTCTGAAGTCCATGTTCTCGCCGTCGATGATAGCCTCGTCGACCGAAAAGTAATCGAGCGGCTCCTCCGCCTCACCGCCTGCCGAGTTACTGCTGTGGATAGTGGAATCAGAGCTCTACAATATCTTGGATTGCAAGATGAGACGAATTCCCAAGTGGGTTTTGATGAATCTTCAACTCTGCGAGAGATTCCGGTGGTGATTATGTCGTCGGAAAACGTGGTGGCGAGGATAGACAGGTGTTTGGAGGAAGGAGCAGAGGATTTCATAGTAAAGCCGGTGAAATTATCAGATGTGAAACGGCTCAGGGAATATATGGTGGGGGACGAAAAGACCGGAAGTGAAATAAATTGGATGAACAAAAGGACGGTACGAGAGTCGTCGTGTGATGAAGCCTCATCATCACCGTCTATTTCATCCGATTCTTCTCCACCATCATCATCACCGTCCATTTCATCCGATTCTTCTCCATCGTCTTCATCACCGTCAGATTCGGTTCAATCCACGCCGTCCCCATCAGAGCCGTCTTCACCGACGTCCACCCAATCCGACGACGGCTCTAAATGA

Protein sequence

MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFDESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSCDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQSDDGSK
Homology
[Close]
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match: ARR5_ARATH (Two-component response regulator ARR5 OS=Arabidopsis thaliana GN=ARR5 PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-34
Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 1 

Query: 29  VHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFD------- 88
           +HVLAVDDS+VDRK IERLLR+++C+VT VDS  RALQYLGL  E NS VGF+       
Sbjct: 25  LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84

Query: 89  -------------------ESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLS 148
                              ESS  REIPVVIMSSEN++ RIDRCLEEGAEDF++KPVKL+
Sbjct: 85  MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144

[Close]
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match: ARR4_ARATH (Two-component response regulator ARR4 OS=Arabidopsis thaliana GN=ARR4 PE=1 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 5.8e-32
Identity = 115/246 (46.75%), Postives = 144/246 (58.54%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTR-----DRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRV 60
           MAR    S  RRS+ +        +  P    EVHVLAVDDSLVDR VIERLLR+T+C+V
Sbjct: 1   MARDGGVSCLRRSEMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKV 60

Query: 61  TAVDSGIRALQYLGLQDETNS-------------------QVGFD------ESSTLREIP 120
           TAVDSG RAL++LGL +E  S                     G++      ESS  RE+P
Sbjct: 61  TAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVP 120

Query: 121 VVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVR 180
           VVIMSSENV+ RIDRCLEEGA+DF++KPVKL+DVKRLR ++  D K  +     NKR + 
Sbjct: 121 VVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSNG----NKRKLP 180

Query: 181 ESSCDEASSSP------SISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPT 211
           E S    SS P      +IS +SSPP +  + SSDSSP   SP +   ++P     SSP 
Sbjct: 181 EDSSSVNSSLPPPSPPLTISPESSPPLTVSTESSDSSP-PLSPVEIFSTSPL----SSPI 237

[Close]
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match: ARR6_ARATH (Two-component response regulator ARR6 OS=Arabidopsis thaliana GN=ARR6 PE=1 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 5.0e-31
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1 

Query: 11  RRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGL 70
           R+ + ++   +F + D  +HVLAVDDS VDRK IERLLR+++C+VT VDS  RALQYLGL
Sbjct: 8   RKMEILNHSSKFGSPDP-LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 67

Query: 71  QDETNSQVGFD--------------------------ESSTLREIPVVIMSSENVVARID 130
             E  S VGF+                          ESS  RE+PVVIMSSEN++ RID
Sbjct: 68  DVEEKS-VGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRID 127

Query: 131 RCLEEGAEDFIVKPVKLSDVKRLREYMV 133
           RCLEEGAEDF++KPVKLSDVKRLR+ ++
Sbjct: 128 RCLEEGAEDFLLKPVKLSDVKRLRDSLM 153

[Close]
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match: ARR3_ARATH (Two-component response regulator ARR3 OS=Arabidopsis thaliana GN=ARR3 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.7e-29
Identity = 100/227 (44.05%), Postives = 129/227 (56.83%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTR----DRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVT 60
           MA+    S  RRS+ I       +  P    +VHVLAVDDSLVDR VIERLLR+T+C+VT
Sbjct: 1   MAKDGGVSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVT 60

Query: 61  AVDSGIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIP 120
           AVDSG RAL++LGL D+  + V FD                          ES++ +E+P
Sbjct: 61  AVDSGWRALEFLGLDDD-KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVP 120

Query: 121 VVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVR 180
           VVIMSSENV+ RIDRCLEEGAEDF++KPVKL+DVKRLR Y+  D K  +E N   ++   
Sbjct: 121 VVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTRDVKVAAEGN--KRKLTT 180

Query: 181 ESSCDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSP 198
                  S++ S+ S  S   S  S+  D    + SP  +     SP
Sbjct: 181 PPPPPPLSATSSMESSDSTVESPLSMVDDEDSLTMSPESATSLVDSP 224

[Close]
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match: ARR15_ARATH (Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.5e-29
Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1 

Query: 24  TSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQ------ 83
           +S  E+HVLAVDDS VDRKVIERLL+++AC+VT V+SG RALQYLGL  +  S       
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLK 72

Query: 84  -------------VGFD------ESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKP 143
                         G++      ESS LREIPVVIMSSEN+  RI++C+ EGAE+F++KP
Sbjct: 73  VNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKP 132

Query: 144 VKLSDVKRLRE-YMVGDEKTGSEINWMNKRTVRESSCDEASSSPSISSDSSPPSSSPSIS 185
           VKL+DVKRL+E  M G E    +   ++ + + ++  D + SS S SS SS  S   S  
Sbjct: 133 VKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSS--SHDVSSL 192

[Close]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match: A0A0A0KQC9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603910 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.5e-71
Identity = 176/239 (73.64%), Postives = 186/239 (77.82%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR  +FSRRRRSDQ+D  DRFPTSDSEVHVLAVDDSLVDR VIERLLRLTACRVTAVDS
Sbjct: 1   MARNHIFSRRRRSDQLDGLDRFPTSDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           GIRALQYLGLQDETNSQVGFD                          ESSTLREIPVVIM
Sbjct: 61  GIRALQYLGLQDETNSQVGFDGLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTG+E + +NKR +RE  C
Sbjct: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGNERSGINKRKLREP-C 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQSDDGSK 214
           D+ SSSPSISS    P+SS S  S  SPS SSPSDS+QSTPS SEPSSP ST   + SK
Sbjct: 181 DQPSSSPSISS----PASSDSSPSSPSPS-SSPSDSLQSTPSSSEPSSPMSTPQSNASK 233

[Close]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match: W9S1Y9_9ROSA (Two-component response regulator OS=Morus notabilis GN=L484_027845 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.0e-46
Identity = 142/235 (60.43%), Postives = 160/235 (68.09%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR    S RRRS+++D  +  P    EVHVLAVDDSLVDRKVIERLLR+T+C+VTAVDS
Sbjct: 1   MARNGTVSWRRRSEKVDGFEFSPVDSEEVHVLAVDDSLVDRKVIERLLRITSCKVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           G RALQ+LGL +E NS VGFD                          ESST R+IPVVIM
Sbjct: 61  GRRALQFLGLDEEKNSSVGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFRQIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSE-INWMNKRTVRESS 180
           SSENV+ARIDRCLEEGAEDFIVKPVKLSDVKRLR+YM  + K G++     NKR  RE S
Sbjct: 121 SSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTKEVKMGNDGTGGANKRKQRE-S 180

Query: 181 CDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
            D +SS PSI S SSPPS   S+SS SSP S SPS S  S+ S S PSSPTS  S
Sbjct: 181 FDLSSSPPSILS-SSPPS---SLSSPSSP-SPSPSRSPLSS-SLSAPSSPTSLDS 228

[Close]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match: M5Y0C2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010863mg PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.9e-43
Identity = 133/234 (56.84%), Postives = 152/234 (64.96%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR+ V S RRRS+++D  D  P +  E HVLAVDDSLVDRKVIERLLR+++C+VTAVDS
Sbjct: 1   MARSGVVSWRRRSEKLDGFDMSPMNSEEAHVLAVDDSLVDRKVIERLLRISSCKVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           G RALQ+LGL D+ +S VGFD                          ESS L+EIPVVIM
Sbjct: 61  GRRALQFLGLDDDKSSSVGFDGLKVDLIITDYCMPGMTGYELLKKIKESSALKEIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENV+ARIDRCLEEGAEDFIVKPVKLSDVKRL++YM    + G E + M KR +RE  C
Sbjct: 121 SSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLKDYMT--REAGLEGSGMKKRKLRE-PC 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
           D  SS PSI   SSP SS  S S   SP  SS         S S PSSPTS  S
Sbjct: 181 DLPSSPPSI-LPSSPSSSLSSPSKSPSPPLSS---------SFSAPSSPTSLDS 221

[Close]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match: A0A067JP36_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21755 PE=4 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 4.3e-42
Identity = 137/241 (56.85%), Postives = 155/241 (64.32%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDS-EVHVLAVDDSLVDRKVIERLLRLTACRVTAVD 60
           MAR  + SR  RSD++D  +  P+SD  EVHVLAVDDSL+DRKVIERLL++++C+VTAVD
Sbjct: 1   MARNGIVSRHWRSDKLDAFNLSPSSDDQEVHVLAVDDSLIDRKVIERLLKISSCKVTAVD 60

Query: 61  SGIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVI 120
           SG RALQ+LGL +E  S VG D                          ESST REIPVVI
Sbjct: 61  SGRRALQFLGLDEEKTSSVGLDSLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVI 120

Query: 121 MSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDE---KTGSEINWMNKRTVR 180
           MSSENV+ RIDRCLEEGAEDFIVKPVKLSDVKRLR+YM   E   K        NKR +R
Sbjct: 121 MSSENVMTRIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTAREIRLKNQQIAVVNNKRKLR 180

Query: 181 ESSCDEASSSPSISSDSSP---PSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQ 209
           E S D +SSS SIS   SP   PS SPS SS SSPSS SPS  +    S S P SPT   
Sbjct: 181 E-SFDHSSSSLSISPSPSPSPSPSPSPSPSSLSSPSSPSPS-PLPPVLSYSAPCSPTCLD 239

[Close]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match: A0A0A1WCB3_NICAT (Type A response regulator RRA3 OS=Nicotiana attenuata GN=RRA3 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 4.8e-41
Identity = 122/235 (51.91%), Postives = 159/235 (67.66%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDT-RDRFPTSDS--EVHVLAVDDSLVDRKVIERLLRLTACRVTA 60
           MA+  VFSRRRR+++++   +  P ++S  EVHVLAVDDSLVDR VIERLL++T+C+VT 
Sbjct: 1   MAKNGVFSRRRRAERVEEFEELLPLTESTNEVHVLAVDDSLVDRIVIERLLKITSCKVTT 60

Query: 61  VDSGIRALQYLGLQDETNS-------------------QVGFD-----ESSTLREIPVVI 120
           VDSG+RAL+YLGL +E +S                     G+D     + S+ REIPVVI
Sbjct: 61  VDSGMRALKYLGLDEEQSSVRIDGLKVDMIITDYCMPGMTGYDLLKKIKGSSFREIPVVI 120

Query: 121 MSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESS 180
           MSSENV+ RIDRCLEEGAEDF++KPVKLSDVKRL+ YM  +++   E   MNKR + E+S
Sbjct: 121 MSSENVLTRIDRCLEEGAEDFLLKPVKLSDVKRLKSYMFNEDRFREEEKGMNKRKLPETS 180

Query: 181 CDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
            DE SS+P++       S SPS+S   SP S SPS  + STPSP   SSP+S ++
Sbjct: 181 SDE-SSTPTL-------SPSPSLSPSPSP-SPSPSLDLSSTPSPPSTSSPSSPKA 226

[Close]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match: AT3G48100.1 (AT3G48100.1 response regulator 5)

HSP 1 Score: 147.1 bits (370), Expect = 1.2e-35
Identity = 82/145 (56.55%), Postives = 100/145 (68.97%), Query Frame = 1 

Query: 29  VHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQVGFD------- 88
           +HVLAVDDS+VDRK IERLLR+++C+VT VDS  RALQYLGL  E NS VGF+       
Sbjct: 25  LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGLDGENNSSVGFEDLKINLI 84

Query: 89  -------------------ESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKPVKLS 148
                              ESS  REIPVVIMSSEN++ RIDRCLEEGAEDF++KPVKL+
Sbjct: 85  MTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAEDFLLKPVKLA 144

[Close]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match: AT1G10470.1 (AT1G10470.1 response regulator 4)

HSP 1 Score: 139.0 bits (349), Expect = 3.3e-33
Identity = 115/246 (46.75%), Postives = 144/246 (58.54%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTR-----DRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRV 60
           MAR    S  RRS+ +        +  P    EVHVLAVDDSLVDR VIERLLR+T+C+V
Sbjct: 1   MARDGGVSCLRRSEMMSVGGIGGIESAPLDLDEVHVLAVDDSLVDRIVIERLLRITSCKV 60

Query: 61  TAVDSGIRALQYLGLQDETNS-------------------QVGFD------ESSTLREIP 120
           TAVDSG RAL++LGL +E  S                     G++      ESS  RE+P
Sbjct: 61  TAVDSGWRALEFLGLDNEKASAEFDRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVP 120

Query: 121 VVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVR 180
           VVIMSSENV+ RIDRCLEEGA+DF++KPVKL+DVKRLR ++  D K  +     NKR + 
Sbjct: 121 VVIMSSENVLTRIDRCLEEGAQDFLLKPVKLADVKRLRSHLTKDVKLSNG----NKRKLP 180

Query: 181 ESSCDEASSSP------SISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPT 211
           E S    SS P      +IS +SSPP +  + SSDSSP   SP +   ++P     SSP 
Sbjct: 181 EDSSSVNSSLPPPSPPLTISPESSPPLTVSTESSDSSP-PLSPVEIFSTSPL----SSPI 237

[Close]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match: AT5G62920.1 (AT5G62920.1 response regulator 6)

HSP 1 Score: 136.0 bits (341), Expect = 2.8e-32
Identity = 79/148 (53.38%), Postives = 99/148 (66.89%), Query Frame = 1 

Query: 11  RRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGL 70
           R+ + ++   +F + D  +HVLAVDDS VDRK IERLLR+++C+VT VDS  RALQYLGL
Sbjct: 8   RKMEILNHSSKFGSPDP-LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL 67

Query: 71  QDETNSQVGFD--------------------------ESSTLREIPVVIMSSENVVARID 130
             E  S VGF+                          ESS  RE+PVVIMSSEN++ RID
Sbjct: 68  DVEEKS-VGFEDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRID 127

Query: 131 RCLEEGAEDFIVKPVKLSDVKRLREYMV 133
           RCLEEGAEDF++KPVKLSDVKRLR+ ++
Sbjct: 128 RCLEEGAEDFLLKPVKLSDVKRLRDSLM 153

[Close]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 100/227 (44.05%), Postives = 129/227 (56.83%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTR----DRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVT 60
           MA+    S  RRS+ I       +  P    +VHVLAVDDSLVDR VIERLLR+T+C+VT
Sbjct: 1   MAKDGGVSCLRRSEMIGIGIGELESPPLDSDQVHVLAVDDSLVDRIVIERLLRITSCKVT 60

Query: 61  AVDSGIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIP 120
           AVDSG RAL++LGL D+  + V FD                          ES++ +E+P
Sbjct: 61  AVDSGWRALEFLGLDDD-KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVP 120

Query: 121 VVIMSSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVR 180
           VVIMSSENV+ RIDRCLEEGAEDF++KPVKL+DVKRLR Y+  D K  +E N   ++   
Sbjct: 121 VVIMSSENVMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTRDVKVAAEGN--KRKLTT 180

Query: 181 ESSCDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSP 198
                  S++ S+ S  S   S  S+  D    + SP  +     SP
Sbjct: 181 PPPPPPLSATSSMESSDSTVESPLSMVDDEDSLTMSPESATSLVDSP 224

[Close]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match: AT1G74890.1 (AT1G74890.1 response regulator 15)

HSP 1 Score: 129.8 bits (325), Expect = 2.0e-30
Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 1 

Query: 24  TSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDSGIRALQYLGLQDETNSQ------ 83
           +S  E+HVLAVDDS VDRKVIERLL+++AC+VT V+SG RALQYLGL  +  S       
Sbjct: 13  SSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSSGLKDLK 72

Query: 84  -------------VGFD------ESSTLREIPVVIMSSENVVARIDRCLEEGAEDFIVKP 143
                         G++      ESS LREIPVVIMSSEN+  RI++C+ EGAE+F++KP
Sbjct: 73  VNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEEFLLKP 132

Query: 144 VKLSDVKRLRE-YMVGDEKTGSEINWMNKRTVRESSCDEASSSPSISSDSSPPSSSPSIS 185
           VKL+DVKRL+E  M G E    +   ++ + + ++  D + SS S SS SS  S   S  
Sbjct: 133 VKLADVKRLKELIMRGGEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSS--SHDVSSL 192

[Close]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match: gi|659090906|ref|XP_008446266.1| (PREDICTED: two-component response regulator ARR5-like [Cucumis melo])

HSP 1 Score: 284.6 bits (727), Expect = 1.4e-73
Identity = 179/239 (74.90%), Postives = 188/239 (78.66%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR P+FSRRRRSDQ+D  DRFPTSDSEVHVLAVDDSLVDR VIERLLRLTACRVTAVDS
Sbjct: 1   MARNPIFSRRRRSDQLDALDRFPTSDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           GIRALQYLGLQDETNSQVGFD                          ESSTLREIPVVIM
Sbjct: 61  GIRALQYLGLQDETNSQVGFDGLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTG+E + +NKR +RE  C
Sbjct: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGNERSGINKRKLREP-C 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQSDDGSK 214
           D+ SSSPSISS    P+SS S  S  SPS SSPSDS+QSTPS SEPSSP ST   DGSK
Sbjct: 181 DQPSSSPSISS----PASSDSSPSCPSPS-SSPSDSLQSTPSSSEPSSPMSTPQSDGSK 233

[Close]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match: gi|449434875|ref|XP_004135221.1| (PREDICTED: two-component response regulator ARR5 [Cucumis sativus])

HSP 1 Score: 277.3 bits (708), Expect = 2.2e-71
Identity = 176/239 (73.64%), Postives = 186/239 (77.82%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR  +FSRRRRSDQ+D  DRFPTSDSEVHVLAVDDSLVDR VIERLLRLTACRVTAVDS
Sbjct: 1   MARNHIFSRRRRSDQLDGLDRFPTSDSEVHVLAVDDSLVDRTVIERLLRLTACRVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           GIRALQYLGLQDETNSQVGFD                          ESSTLREIPVVIM
Sbjct: 61  GIRALQYLGLQDETNSQVGFDGLKVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTG+E + +NKR +RE  C
Sbjct: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGNERSGINKRKLREP-C 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQSDDGSK 214
           D+ SSSPSISS    P+SS S  S  SPS SSPSDS+QSTPS SEPSSP ST   + SK
Sbjct: 181 DQPSSSPSISS----PASSDSSPSSPSPS-SSPSDSLQSTPSSSEPSSPMSTPQSNASK 233

[Close]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match: gi|703114017|ref|XP_010100530.1| (Two-component response regulator [Morus notabilis])

HSP 1 Score: 192.6 bits (488), Expect = 7.1e-46
Identity = 142/235 (60.43%), Postives = 160/235 (68.09%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR    S RRRS+++D  +  P    EVHVLAVDDSLVDRKVIERLLR+T+C+VTAVDS
Sbjct: 1   MARNGTVSWRRRSEKVDGFEFSPVDSEEVHVLAVDDSLVDRKVIERLLRITSCKVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           G RALQ+LGL +E NS VGFD                          ESST R+IPVVIM
Sbjct: 61  GRRALQFLGLDEEKNSSVGFDGLKVDLIITDYCMPGMTGYELLKKIKESSTFRQIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSE-INWMNKRTVRESS 180
           SSENV+ARIDRCLEEGAEDFIVKPVKLSDVKRLR+YM  + K G++     NKR  RE S
Sbjct: 121 SSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLRDYMTKEVKMGNDGTGGANKRKQRE-S 180

Query: 181 CDEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
            D +SS PSI S SSPPS   S+SS SSP S SPS S  S+ S S PSSPTS  S
Sbjct: 181 FDLSSSPPSILS-SSPPS---SLSSPSSP-SPSPSRSPLSS-SLSAPSSPTSLDS 228

[Close]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match: gi|645279958|ref|XP_008244969.1| (PREDICTED: two-component response regulator ARR5 [Prunus mume])

HSP 1 Score: 187.2 bits (474), Expect = 3.0e-44
Identity = 134/234 (57.26%), Postives = 153/234 (65.38%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR+ V S RRRS+++D  D  P +  E HVLAVDDSLVDRKVIERLLR+++C+VTAVDS
Sbjct: 1   MARSGVVSWRRRSEKLDGFDMVPMNSEEAHVLAVDDSLVDRKVIERLLRISSCKVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           G RALQ+LGL D+ +S VGFD                          ESS L+EIPVVIM
Sbjct: 61  GRRALQFLGLDDDKSSSVGFDGLKVDLIITDYCMPGMTGYELLKKIKESSALKEIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENV+ARIDRCLEEGAEDFIVKPVKLSDVKRL++YM    + G E + MNKR +RE  C
Sbjct: 121 SSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLKDYMT--REAGLEESGMNKRKLRE-PC 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
           D  SS PSI   SSP SS  S S   SP  SS         S S PSSPTS  S
Sbjct: 181 DVPSSPPSI-LPSSPSSSLSSPSKSPSPPLSS---------SVSAPSSPTSLDS 221

[Close]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match: gi|596213034|ref|XP_007223876.1| (hypothetical protein PRUPE_ppa010863mg [Prunus persica])

HSP 1 Score: 183.0 bits (463), Expect = 5.6e-43
Identity = 133/234 (56.84%), Postives = 152/234 (64.96%), Query Frame = 1 

Query: 1   MARTPVFSRRRRSDQIDTRDRFPTSDSEVHVLAVDDSLVDRKVIERLLRLTACRVTAVDS 60
           MAR+ V S RRRS+++D  D  P +  E HVLAVDDSLVDRKVIERLLR+++C+VTAVDS
Sbjct: 1   MARSGVVSWRRRSEKLDGFDMSPMNSEEAHVLAVDDSLVDRKVIERLLRISSCKVTAVDS 60

Query: 61  GIRALQYLGLQDETNSQVGFD--------------------------ESSTLREIPVVIM 120
           G RALQ+LGL D+ +S VGFD                          ESS L+EIPVVIM
Sbjct: 61  GRRALQFLGLDDDKSSSVGFDGLKVDLIITDYCMPGMTGYELLKKIKESSALKEIPVVIM 120

Query: 121 SSENVVARIDRCLEEGAEDFIVKPVKLSDVKRLREYMVGDEKTGSEINWMNKRTVRESSC 180
           SSENV+ARIDRCLEEGAEDFIVKPVKLSDVKRL++YM    + G E + M KR +RE  C
Sbjct: 121 SSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLKDYMT--REAGLEGSGMKKRKLRE-PC 180

Query: 181 DEASSSPSISSDSSPPSSSPSISSDSSPSSSSPSDSVQSTPSPSEPSSPTSTQS 209
           D  SS PSI   SSP SS  S S   SP  SS         S S PSSPTS  S
Sbjct: 181 DLPSSPPSI-LPSSPSSSLSSPSKSPSPPLSS---------SFSAPSSPTSLDS 221

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g04000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ARR5_ARATH2.1e-3456.55Two-component response regulator ARR5 OS=Arabidopsis thaliana GN=ARR5 PE=1 SV=2[more]
ARR4_ARATH5.8e-3246.75Two-component response regulator ARR4 OS=Arabidopsis thaliana GN=ARR4 PE=1 SV=1[more]
ARR6_ARATH5.0e-3153.38Two-component response regulator ARR6 OS=Arabidopsis thaliana GN=ARR6 PE=1 SV=2[more]
ARR3_ARATH2.7e-2944.05Two-component response regulator ARR3 OS=Arabidopsis thaliana GN=ARR3 PE=2 SV=1[more]
ARR15_ARATH3.5e-2947.59Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=... [more]
BLAST of Cp4.1LG01g04000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQC9_CUCSA1.5e-7173.64Uncharacterized protein OS=Cucumis sativus GN=Csa_5G603910 PE=4 SV=1[more]
W9S1Y9_9ROSA5.0e-4660.43Two-component response regulator OS=Morus notabilis GN=L484_027845 PE=4 SV=1[more]
M5Y0C2_PRUPE3.9e-4356.84Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010863mg PE=4 SV=1[more]
A0A067JP36_JATCU4.3e-4256.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21755 PE=4 SV=1[more]
A0A0A1WCB3_NICAT4.8e-4151.91Type A response regulator RRA3 OS=Nicotiana attenuata GN=RRA3 PE=4 SV=1[more]
BLAST of Cp4.1LG01g04000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48100.11.2e-3556.55 response regulator 5[more]
AT1G10470.13.3e-3346.75 response regulator 4[more]
AT5G62920.12.8e-3253.38 response regulator 6[more]
AT1G59940.11.5e-3044.05 response regulator 3[more]
AT1G74890.12.0e-3047.59 response regulator 15[more]
BLAST of Cp4.1LG01g04000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090906|ref|XP_008446266.1|1.4e-7374.90PREDICTED: two-component response regulator ARR5-like [Cucumis melo][more]
gi|449434875|ref|XP_004135221.1|2.2e-7173.64PREDICTED: two-component response regulator ARR5 [Cucumis sativus][more]
gi|703114017|ref|XP_010100530.1|7.1e-4660.43Two-component response regulator [Morus notabilis][more]
gi|645279958|ref|XP_008244969.1|3.0e-4457.26PREDICTED: two-component response regulator ARR5 [Prunus mume][more]
gi|596213034|ref|XP_007223876.1|5.6e-4356.84hypothetical protein PRUPE_ppa010863mg [Prunus persica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000160phosphorelay signal transduction system
Vocabulary: INTERPRO
TermDefinition
IPR011006CheY-like_superfamily
IPR001789Sig_transdc_resp-reg_receiver
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0016310 phosphorylation
biological_process GO:0008150 biological_process
cellular_component GO:0005622 intracellular
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g04000.1Cp4.1LG01g04000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001789Signal transduction response regulator, receiver domainPFAMPF00072Response_regcoord: 87..124
score: 6.
IPR001789Signal transduction response regulator, receiver domainSMARTSM00448REC_2coord: 29..128
score: 0.
IPR001789Signal transduction response regulator, receiver domainPROFILEPS50110RESPONSE_REGULATORYcoord: 30..132
score: 13
IPR011006CheY-like superfamilyunknownSSF52172CheY-likecoord: 29..131
score: 2.28
NoneNo IPR availableGENE3DG3DSA:3.40.50.2300coord: 83..132
score: 4.9E-9coord: 27..73
score: 1.
NoneNo IPR availablePANTHERPTHR26402RESPONSE REGULATOR OF TWO-COMPONENT SYSTEMcoord: 29..167
score: 1.7
NoneNo IPR availablePANTHERPTHR26402:SF526TWO-COMPONENT RESPONSE REGULATOR ARR15-RELATEDcoord: 29..167
score: 1.7