Cp4.1LG00g02540.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTCGGCCCATATTCAAAATTTGCAATTCGCGCATCCCAAACAGAGCCAGGATTGGTTCATATAAGATGCTGTTACAACAACAAATTCTGGGTTCGTTTGTCAGAGGATTCCAACTACATTGCAGCCATTGCCAACGAAGAACAAGAAGACAAATCAAAATGGTCCTGCACTCTGTTCGAACCCATTTTCCTACCGGACAAAAAACAACACTACATCCGACATGTTCAACTCAATACCTTTCTATGTCTGGCCGAATCACACCCTTCACCCTACAACGATTGCCTAGCAGCAACAATTCAAGACATATCCACAATCGACGAAAATCTTGTTCTCTTAACCGCCATGGATTGGGACTCCATATTCATACTCCCAAAATACGTAGCTTTCAAGGGTAACAACGGCGAATATCTCGAACCCTCTGGAAAATACCTCAAATTCTCTGCTTCTAACGTGGAGGATTCATCAGTCGTGTTTGAAATCATATCCCAACAAGATGGGTATGTTCATATCAAACATGTTAATTCCGGTAAGTATTGGGTTCGAGACCCGAATTGGATATGGTGTGAATCGACAAACCCAGGACAGGACAACCCCAATGCTCTGTTTTGGCCTGTCAAAGTGGACAGCAACATCGTAGCTCTTCGCAACAAAGGCAACAACCATTTCTGCAAGAGACTCACAACGGAAGGAAAGACCAATTGCCTTAATGCTGCCGTTGTGACCATTACAGACACTGCACGTTTGGAAGTGGTGGAGATTGTTGTTGCTAGAAGCATTGAAGATGTGGAGTATCGTGTTAATGATGCGAGGGTTTATGGGAAGAAGATACTCACTGTGTCAAAAGGGGTAGCCATTAACAACACGGAGGTTGCTGACAAGGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA MNLLRGLGKAGTDTLGGVIKGAGKLVETVGDVAEKAPIVGGVGTVVEATGQAIENIGEKTEDFGEEVFDRNENNPKQGFDPLNDDDDDNDNDIDEAEKKLMNDENRAVGDDTGDSDDDDEAIAKAIPKNFSLKSTRNNKYLRYISESDDTDGLLRFSGNNIVVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEKSFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTTYDYKFETEKFPL
BLAST of Cp4.1LG00g02540.1 vs. TrEMBL
Match: A0A0A0K983_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 3.9e-49 Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. TrEMBL
Match: A0A0A0KD65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085100 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45 Identity = 95/129 (73.64%), Postives = 111/129 (86.05%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. TrEMBL
Match: A0A0A0KA25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086140 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44 Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. TrEMBL
Match: M8A350_TRIUA (Natterin-4 OS=Triticum urartu GN=TRIUR3_01514 PE=4 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.9e-17 Identity = 61/172 (35.47%), Postives = 97/172 (56.40%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. TrEMBL
Match: A0A0A0KEW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083560 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 6.7e-17 Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. NCBI nr
Match: gi|778722042|ref|XP_004140683.2| (PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus]) HSP 1 Score: 203.4 bits (516), Expect = 5.5e-49 Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. NCBI nr
Match: gi|659120440|ref|XP_008460195.1| (PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo]) HSP 1 Score: 202.6 bits (514), Expect = 9.5e-49 Identity = 101/129 (78.29%), Postives = 115/129 (89.15%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. NCBI nr
Match: gi|700191123|gb|KGN46327.1| (hypothetical protein Csa_6G085100 [Cucumis sativus]) HSP 1 Score: 189.5 bits (480), Expect = 8.3e-45 Identity = 95/129 (73.64%), Postives = 111/129 (86.05%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. NCBI nr
Match: gi|778722046|ref|XP_004140681.2| (PREDICTED: uncharacterized protein LOC101212469 [Cucumis sativus]) HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44 Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 1
BLAST of Cp4.1LG00g02540.1 vs. NCBI nr
Match: gi|645281008|ref|XP_008245436.1| (PREDICTED: uncharacterized protein LOC103343557 [Prunus mume]) HSP 1 Score: 110.9 bits (276), Expect = 3.7e-21 Identity = 59/160 (36.88%), Postives = 92/160 (57.50%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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