Cp4.1LG00g02540 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG00g02540
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG00 : 8179340 .. 8181100 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTCGGCCCATATTCAAAATTTGCAATTCGCGCATCCCAAACAGAGCCAGGATTGGTTCATATAAGATGCTGTTACAACAACAAATTCTGGGTTCGTTTGTCAGAGGATTCCAACTACATTGCAGCCATTGCCAACGAAGAACAAGAAGACAAATCAAAATGGTCCTGCACTCTGTTCGAACCCATTTTCCTACCGGACAAAAAACAACACTACATCCGACATGTTCAACTCAATACCTTTCTATGTCTGGCCGAATCACACCCTTCACCCTACAACGATTGCCTAGCAGCAACAATTCAAGACATATCCACAATCGACGAAAATCTTGTTCTCTTAACCGCCATGGATTGGGACTCCATATTCATACTCCCAAAATACGTAGCTTTCAAGGGTAACAACGGCGAATATCTCGAACCCTCTGGAAAATACCTCAAATTCTCTGCTTCTAACGTGGAGGATTCATCAGTCGTGTTTGAAATCATATCCCAACAAGATGGGTATGTTCATATCAAACATGTTAATTCCGGTAAGTATTGGGTTCGAGACCCGAATTGGATATGGTGTGAATCGACAAACCCAGGACAGGACAACCCCAATGCTCTGTTTTGGCCTGTCAAAGTGGACAGCAACATCGTAGCTCTTCGCAACAAAGGCAACAACCATTTCTGCAAGAGACTCACAACGGAAGGAAAGACCAATTGCCTTAATGCTGCCGTTGTGACCATTACAGACACTGCACGTTTGGAAGTGGTGGAGATTGTTGTTGCTAGAAGCATTGAAGATGTGGAGTATCGTGTTAATGATGCGAGGGTTTATGGGAAGAAGATACTCACTGTGTCAAAAGGGGTAGCCATTAACAACACGGAGGTTGCTGACAAGGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA

mRNA sequence

ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA

Coding sequence (CDS)

ATGAATCTTTTGAGAGGACTAGGGAAAGCTGGGACGGACACTCTCGGGGGAGTTATCAAAGGAGCCGGGAAGCTGGTCGAAACCGTGGGGGACGTTGCCGAGAAGGCCCCAATCGTCGGTGGTGTAGGCACTGTCGTCGAGGCTACCGGACAGGCCATTGAAAACATCGGCGAGAAAACTGAGGACTTCGGAGAAGAAGTATTTGACAGGAATGAAAATAACCCAAAACAAGGTTTCGACCCACTTAATGACGACGACGACGACAACGACAACGATATAGATGAAGCAGAGAAGAAGTTAATGAACGATGAAAACAGAGCAGTGGGAGACGATACCGGCGATTCCGACGACGATGACGAAGCCATTGCGAAGGCAATCCCCAAGAATTTCTCCCTCAAATCCACACGTAACAACAAATACCTTCGCTACATTAGTGAAAGCGACGACACCGACGGGCTTCTCCGATTCTCCGGCAACAACATTGTAGTTATGAAATTCAGGTACGAGAAGAAGGTGGAAACCAGTTGGAGTTCATCTGTGTCGTCGACATTTGGGATTTCCACGAAGGTGTCAGCGAAGATTCCAACGGTGGGGAAATTGAAGTTTGAGCTTTCAATGGAGGTTTCTAAGGGCAGCAGTGAGGCAACGACGGAGGAGGAGAAGTCATTTGTAGAGACAGCTGAGACCATAACCATACCTCCGATGTCAAAGGTGAAATTCAGTGCAGTGGTAACTCAGGCTCGCTGTGATGTGCCCTTTTCGTACACTCAAAAGGACACTCTAAAGGATGGAAGGCAGGTGAGCCATCGTTTGGAGGATGGGATATTCAGGGGTGTCACCACTTATGACTATAAATTTGAGACTGAAAAGTTTCCACTTTGA

Protein sequence

MNLLRGLGKAGTDTLGGVIKGAGKLVETVGDVAEKAPIVGGVGTVVEATGQAIENIGEKTEDFGEEVFDRNENNPKQGFDPLNDDDDDNDNDIDEAEKKLMNDENRAVGDDTGDSDDDDEAIAKAIPKNFSLKSTRNNKYLRYISESDDTDGLLRFSGNNIVVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEKSFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTTYDYKFETEKFPL
BLAST of Cp4.1LG00g02540 vs. TrEMBL
Match: A0A0A0K983_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 3.9e-49
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 1

Query: 159 NNIVVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTE 218
           N+ + +KFRYEKKVE +WSSSVSSTFGI+TK   KIPTVG LKFELS+EVS  ++   TE
Sbjct: 479 NDKISLKFRYEKKVERTWSSSVSSTFGIATKFKTKIPTVGSLKFELSLEVSSENTREETE 538

Query: 219 EEKSFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRG 278
           +EKSFVET ETITIP MSKVKFSA+VTQA CDVPFSYT++DTLKDGRQV+HRLEDG+F G
Sbjct: 539 KEKSFVETGETITIPAMSKVKFSAMVTQAYCDVPFSYTRRDTLKDGRQVTHRLEDGLFTG 598

Query: 279 VTTYDYKFETEK 291
           VTTYDYKFETEK
Sbjct: 599 VTTYDYKFETEK 610

BLAST of Cp4.1LG00g02540 vs. TrEMBL
Match: A0A0A0KD65_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085100 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 5.8e-45
Identity = 95/129 (73.64%), Postives = 111/129 (86.05%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           V +K RYEKKVE +WSSSVSSTFG++T+ ++KIPTVG LKFELS+EVS   +   TE+EK
Sbjct: 494 VSLKLRYEKKVERTWSSSVSSTFGVATRFNSKIPTVGSLKFELSLEVSGEKTREETEKEK 553

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
           SFVE+ E I IP MSKVKFSAVV QA CD+PFSYT++DTLKDGRQV+HRL+DGIFRGVTT
Sbjct: 554 SFVESGEEIKIPAMSKVKFSAVVKQACCDIPFSYTRRDTLKDGRQVTHRLDDGIFRGVTT 613

Query: 282 YDYKFETEK 291
           YDYK ETEK
Sbjct: 614 YDYKIETEK 622

BLAST of Cp4.1LG00g02540 vs. TrEMBL
Match: A0A0A0KA25_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086140 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 1.3e-44
Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           V MKF YE+ VE +WSSS+SSTFGI+T+ +A IP VG++KFELSME S  S+   TE+EK
Sbjct: 337 VSMKFSYERVVERTWSSSMSSTFGIATRFNAMIPGVGRMKFELSMEASSASARQETEKEK 396

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
           S VET ETITIP MSKVKFSAVVT A CDVPFSYT++DTLKDGRQV+HR EDG+F GVTT
Sbjct: 397 SMVETEETITIPAMSKVKFSAVVTHAYCDVPFSYTRRDTLKDGRQVTHRFEDGLFTGVTT 456

Query: 282 YDYKFETEK 291
           YDYKFETEK
Sbjct: 457 YDYKFETEK 465

BLAST of Cp4.1LG00g02540 vs. TrEMBL
Match: M8A350_TRIUA (Natterin-4 OS=Triticum urartu GN=TRIUR3_01514 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 3.9e-17
Identity = 61/172 (35.47%), Postives = 97/172 (56.40%), Query Frame = 1

Query: 130 FSLKSTR--NNKYLRY--ISESDDTDGLLRFSGNNIVVMKFRYEKKVETSWSSSVSSTFG 189
           F L   R  + K L Y  ++ ++DT+ L      +   +  +YE+    +WSS+VS   G
Sbjct: 366 FKLSEARIYDEKPLTYPSMTSTNDTNEL------HAKTLTLKYEETQAKTWSSTVSLKIG 425

Query: 190 ISTKVSAKIPTVGKLKFELSMEVSK----GSSEATTEEEKSFVETAETITIPPMSKVKFS 249
           ++ K+ A IP + + K E+S E +     GSS  TT  +    E +    +PPM+KV   
Sbjct: 426 VTAKLRAGIPVIAEGKVEVSTEFNSEYEWGSSIQTTASK----EASYQAVVPPMTKVTIR 485

Query: 250 AVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTTYDYKFETEKFPL 294
           A VTQ   DVPFSYTQ+D L  G  V+++++DG+F G+  Y+++FET + P+
Sbjct: 486 AAVTQGSVDVPFSYTQRDILTTGEVVTYKMDDGLFTGMNNYNFQFETTQEPI 527

BLAST of Cp4.1LG00g02540 vs. TrEMBL
Match: A0A0A0KEW7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083560 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 6.7e-17
Identity = 45/131 (34.35%), Postives = 77/131 (58.78%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           + +  +Y  +    W SSVS+ +G+   V A +P + ++  E++    K  S   T  + 
Sbjct: 332 MALSLKYVVEASKCWESSVSTAWGVVASVKAGVPEIFEVGVEVNHNEEKSRSWGETITDM 391

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
             V    T+ +PPM+K+K + + T+A+CDVPFSYTQ+D L+DG  V    +DG++ GV T
Sbjct: 392 REVMATYTVNVPPMTKMKVTLIATKAKCDVPFSYTQRDVLRDGTHVIKDCDDGLYTGVHT 451

Query: 282 YDYKFETEKFP 293
           Y++ ++ + FP
Sbjct: 452 YNFDYKNKPFP 462

BLAST of Cp4.1LG00g02540 vs. NCBI nr
Match: gi|778722042|ref|XP_004140683.2| (PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 5.5e-49
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 1

Query: 159 NNIVVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTE 218
           N+ + +KFRYEKKVE +WSSSVSSTFGI+TK   KIPTVG LKFELS+EVS  ++   TE
Sbjct: 479 NDKISLKFRYEKKVERTWSSSVSSTFGIATKFKTKIPTVGSLKFELSLEVSSENTREETE 538

Query: 219 EEKSFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRG 278
           +EKSFVET ETITIP MSKVKFSA+VTQA CDVPFSYT++DTLKDGRQV+HRLEDG+F G
Sbjct: 539 KEKSFVETGETITIPAMSKVKFSAMVTQAYCDVPFSYTRRDTLKDGRQVTHRLEDGLFTG 598

Query: 279 VTTYDYKFETEK 291
           VTTYDYKFETEK
Sbjct: 599 VTTYDYKFETEK 610

BLAST of Cp4.1LG00g02540 vs. NCBI nr
Match: gi|659120440|ref|XP_008460195.1| (PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo])

HSP 1 Score: 202.6 bits (514), Expect = 9.5e-49
Identity = 101/129 (78.29%), Postives = 115/129 (89.15%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           + +KFRYEKKVE +WSSSVSSTFGI+TK   KIPTVG +KFELS+EVS  ++   TE+EK
Sbjct: 478 ISLKFRYEKKVERTWSSSVSSTFGIATKFKTKIPTVGSMKFELSLEVSSENTREETEKEK 537

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
           SFVETAETITIP MSKVKFSA+VTQA CDVPFSYT++DTLKDGRQV+HRLEDG+F GVTT
Sbjct: 538 SFVETAETITIPAMSKVKFSAMVTQAYCDVPFSYTRRDTLKDGRQVTHRLEDGLFTGVTT 597

Query: 282 YDYKFETEK 291
           YDYKFETEK
Sbjct: 598 YDYKFETEK 606

BLAST of Cp4.1LG00g02540 vs. NCBI nr
Match: gi|700191123|gb|KGN46327.1| (hypothetical protein Csa_6G085100 [Cucumis sativus])

HSP 1 Score: 189.5 bits (480), Expect = 8.3e-45
Identity = 95/129 (73.64%), Postives = 111/129 (86.05%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           V +K RYEKKVE +WSSSVSSTFG++T+ ++KIPTVG LKFELS+EVS   +   TE+EK
Sbjct: 494 VSLKLRYEKKVERTWSSSVSSTFGVATRFNSKIPTVGSLKFELSLEVSGEKTREETEKEK 553

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
           SFVE+ E I IP MSKVKFSAVV QA CD+PFSYT++DTLKDGRQV+HRL+DGIFRGVTT
Sbjct: 554 SFVESGEEIKIPAMSKVKFSAVVKQACCDIPFSYTRRDTLKDGRQVTHRLDDGIFRGVTT 613

Query: 282 YDYKFETEK 291
           YDYK ETEK
Sbjct: 614 YDYKIETEK 622

BLAST of Cp4.1LG00g02540 vs. NCBI nr
Match: gi|778722046|ref|XP_004140681.2| (PREDICTED: uncharacterized protein LOC101212469 [Cucumis sativus])

HSP 1 Score: 188.3 bits (477), Expect = 1.8e-44
Identity = 95/129 (73.64%), Postives = 109/129 (84.50%), Query Frame = 1

Query: 162 VVMKFRYEKKVETSWSSSVSSTFGISTKVSAKIPTVGKLKFELSMEVSKGSSEATTEEEK 221
           V MKF YE+ VE +WSSS+SSTFGI+T+ +A IP VG++KFELSME S  S+   TE+EK
Sbjct: 337 VSMKFSYERVVERTWSSSMSSTFGIATRFNAMIPGVGRMKFELSMEASSASARQETEKEK 396

Query: 222 SFVETAETITIPPMSKVKFSAVVTQARCDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTT 281
           S VET ETITIP MSKVKFSAVVT A CDVPFSYT++DTLKDGRQV+HR EDG+F GVTT
Sbjct: 397 SMVETEETITIPAMSKVKFSAVVTHAYCDVPFSYTRRDTLKDGRQVTHRFEDGLFTGVTT 456

Query: 282 YDYKFETEK 291
           YDYKFETEK
Sbjct: 457 YDYKFETEK 465

BLAST of Cp4.1LG00g02540 vs. NCBI nr
Match: gi|645281008|ref|XP_008245436.1| (PREDICTED: uncharacterized protein LOC103343557 [Prunus mume])

HSP 1 Score: 110.9 bits (276), Expect = 3.7e-21
Identity = 59/160 (36.88%), Postives = 92/160 (57.50%), Query Frame = 1

Query: 129 NFSLKSTRNNKYLRYISESDDTDGLLRFSGNNIVVMKFRYEKKVETSWSSSVSSTFGIST 188
           NF L  +R   Y + +      D + R    N + ++  Y+    ++W+SSVS   G+ST
Sbjct: 308 NFRLLDSRI--YSQRVVSMATGDAVNRTQEENTIDLRLSYKDSRSSTWNSSVSMKLGLST 367

Query: 189 KVSAKIPTVGKLKFELSMEVSKGSSEATTEEEKSFVETAETITIPPMSKVKFSAVVTQAR 248
           KV   +P + K + E+S E +       T   +S VET   + +PPMS VK S + T+  
Sbjct: 368 KVQTGVPLIAKGEIEISTEFATEFQWGETNTSESEVETVYRVVVPPMSMVKVSLMATRGS 427

Query: 249 CDVPFSYTQKDTLKDGRQVSHRLEDGIFRGVTTYDYKFET 289
           CDVPFSYTQ+DTL +G  V+  ++DG++ GV +Y++K+ET
Sbjct: 428 CDVPFSYTQRDTLINGTTVTQTMDDGVYTGVNSYNFKYET 465

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K983_CUCSA3.9e-4977.27Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085120 PE=4 SV=1[more]
A0A0A0KD65_CUCSA5.8e-4573.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G085100 PE=4 SV=1[more]
A0A0A0KA25_CUCSA1.3e-4473.64Uncharacterized protein OS=Cucumis sativus GN=Csa_6G086140 PE=4 SV=1[more]
M8A350_TRIUA3.9e-1735.47Natterin-4 OS=Triticum urartu GN=TRIUR3_01514 PE=4 SV=1[more]
A0A0A0KEW7_CUCSA6.7e-1734.35Uncharacterized protein OS=Cucumis sativus GN=Csa_6G083560 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|778722042|ref|XP_004140683.2|5.5e-4977.27PREDICTED: uncharacterized protein LOC101212952 [Cucumis sativus][more]
gi|659120440|ref|XP_008460195.1|9.5e-4978.29PREDICTED: uncharacterized protein LOC103499080 [Cucumis melo][more]
gi|700191123|gb|KGN46327.1|8.3e-4573.64hypothetical protein Csa_6G085100 [Cucumis sativus][more]
gi|778722046|ref|XP_004140681.2|1.8e-4473.64PREDICTED: uncharacterized protein LOC101212469 [Cucumis sativus][more]
gi|645281008|ref|XP_008245436.1|3.7e-2136.88PREDICTED: uncharacterized protein LOC103343557 [Prunus mume][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023307Aerolysin-like toxin, beta complex domain
IPR008998Agglutinin
IPR004991Aerolysin-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009405 pathogenesis
cellular_component GO:0005575 cellular_component
cellular_component GO:0005576 extracellular region
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02540.1Cp4.1LG00g02540.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004991Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2PFAMPF03318ETX_MTX2coord: 168..252
score: 2.
IPR008998Agglutinin domainunknownSSF50382Agglutinincoord: 126..167
score: 5.8
IPR023307Aerolysin-like toxin, beta complex domainGENE3DG3DSA:2.170.15.10coord: 167..289
score: 4.0
NoneNo IPR availableGENE3DG3DSA:2.80.10.50coord: 126..166
score: 1.
NoneNo IPR availablePANTHERPTHR39244FAMILY NOT NAMEDcoord: 155..293
score: 8.5
NoneNo IPR availablePANTHERPTHR39244:SF1SUBFAMILY NOT NAMEDcoord: 155..293
score: 8.5
NoneNo IPR availableunknownSSF56973Aerolisin/ETX pore-forming domaincoord: 166..289
score: 3.79

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g02540Cucurbita maxima (Rimu)cmacpeB025