Cp4.1LG00g02510.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGTGAGCGTTGATACAAACGCCAGTCAGCCGTCAGATCTAGGGCATCGAAGACTGAAATACCCTAATATACCGATATTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTCCGACGAGCGGAGAAGATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTAATCAGACACTGTTCTTCATCCGTGTCTCGAAGCCTTCTCCGGATTACATCTCTCATCATTCGCTGTTTTGATGAATTTCTCTTACGCATCTGAATTTGTTTGCAAGATCTGGTCTCACTTGCTTAATCGATGGTGTGTGGCTTGATTCTTAGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAGTGCGTATATTTCTATTCTTTTTCTTTTTGTTTTCATCAAACAAGTTGCTTCAGAGCTGTAGAATTAGATTTTGACACCTTTTTTGGTTTCGTGTTTTATAGTATTGGGTATTCTGCTGTTCTATAGGTTAGATCACTGTCCTTATGTTCTATGTACCACTTTGTTTTATAAGTTTTGGCTGGTTGGTTTGCGAGCTCCTCGTACCTTATGTACCAGTTCTTTTGCGGATGTTCTGCATAATTTGTCGGCTTACGGGCAGCATTGTTCTTGTTGTTTTTGCATTTCCTTTATTGTCTAGAAACTCACGGTCTTTATTTTGATCGAATTATGAGGTTGAATTTTAGAACTGGCACATAGAATTTCTCAACAATATTTCTATCTGGTTGATTGCTGATATCTGGTTCAATTATGGTTTTTTTTAACAGATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGTGTGTTTATGCATCACTACATTGCTATCTCATTATAGACGGCTCCTTGAACATTCCTGAAAAACTTTTTTGATTTTGTAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAGAATGCTGGGTTAAAAGCACAAACCCTTTTCCATTTTATATATGCTGAATGCAAATTTTGACTTGGATCAATGACTTTTTAATTTAAATGATTTGGAATTAGCGTTGTATTCTTTCAGTTGCATTAGTCGTTCCAAGTTTCTTCTGCAAGAATTAATCAGTTTATCACTCTTGTTTATGCTGATTATGCTTCATTTACCTGCACGCATCAAGAATATGGTACGAGTTGTGTTGCTTTATTCTCCCTCATCCTTT CGTGAGCGTTGATACAAACGCCAGTCAGCCGTCAGATCTAGGGCATCGAAGACTGAAATACCCTAATATACCGATATTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTCCGACGAGCGGAGAAGATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAGAATGCTGGGTTAAAAGCACAAACCCTTTTCCATTTTATATATGCTGAATGCAAATTTTGACTTGGATCAATGACTTTTTAATTTAAATGATTTGGAATTAGCGTTGTATTCTTTCAGTTGCATTAGTCGTTCCAAGTTTCTTCTGCAAGAATTAATCAGTTTATCACTCTTGTTTATGCTGATTATGCTTCATTTACCTGCACGCATCAAGAATATGGTACGAGTTGTGTTGCTTTATTCTCCCTCATCCTTT ATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAG MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
BLAST of Cp4.1LG00g02510.1 vs. Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 1.5e-56 Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 5.6e-56 Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 8.1e-55 Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 4.0e-54 Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 1.5e-53 Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TrEMBL
Match: A0A059D9F6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03442 PE=4 SV=1) HSP 1 Score: 226.9 bits (577), Expect = 1.3e-56 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TrEMBL
Match: A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TrEMBL
Match: A0A059D8U9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03433 PE=4 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56 Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TrEMBL
Match: A0A0V0GZ92_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 224.9 bits (572), Expect = 5.1e-56 Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TrEMBL
Match: I3NMK4_HEVBR (60S ribosomal protein L34A OS=Hevea brasiliensis GN=RPL34A PE=2 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 6.6e-56 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TAIR10
Match: AT1G26880.1 (AT1G26880.1 Ribosomal protein L34e superfamily protein) HSP 1 Score: 214.2 bits (544), Expect = 4.5e-56 Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TAIR10
Match: AT1G69620.1 (AT1G69620.1 ribosomal protein L34) HSP 1 Score: 211.8 bits (538), Expect = 2.3e-55 Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. TAIR10
Match: AT3G28900.1 (AT3G28900.1 Ribosomal protein L34e superfamily protein) HSP 1 Score: 209.9 bits (533), Expect = 8.6e-55 Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. NCBI nr
Match: gi|702277736|ref|XP_010044743.1| (PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis]) HSP 1 Score: 226.9 bits (577), Expect = 1.9e-56 Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. NCBI nr
Match: gi|449459176|ref|XP_004147322.1| (PREDICTED: 60S ribosomal protein L34 [Cucumis sativus]) HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56 Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. NCBI nr
Match: gi|702277691|ref|XP_010044733.1| (PREDICTED: 60S ribosomal protein L34-like [Eucalyptus grandis]) HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56 Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. NCBI nr
Match: gi|565376584|ref|XP_006354783.1| (PREDICTED: 60S ribosomal protein L34 [Solanum tuberosum]) HSP 1 Score: 224.9 bits (572), Expect = 7.3e-56 Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1
BLAST of Cp4.1LG00g02510.1 vs. NCBI nr
Match: gi|313586461|gb|ADR71241.1| (60S ribosomal protein L34A [Hevea brasiliensis]) HSP 1 Score: 224.6 bits (571), Expect = 9.5e-56 Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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