Cp4.1LG00g02510 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG00g02510
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description60S ribosomal protein L34
LocationCp4.1LG00 : 8123777 .. 8125194 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGTGAGCGTTGATACAAACGCCAGTCAGCCGTCAGATCTAGGGCATCGAAGACTGAAATACCCTAATATACCGATATTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTCCGACGAGCGGAGAAGATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTAATCAGACACTGTTCTTCATCCGTGTCTCGAAGCCTTCTCCGGATTACATCTCTCATCATTCGCTGTTTTGATGAATTTCTCTTACGCATCTGAATTTGTTTGCAAGATCTGGTCTCACTTGCTTAATCGATGGTGTGTGGCTTGATTCTTAGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAGTGCGTATATTTCTATTCTTTTTCTTTTTGTTTTCATCAAACAAGTTGCTTCAGAGCTGTAGAATTAGATTTTGACACCTTTTTTGGTTTCGTGTTTTATAGTATTGGGTATTCTGCTGTTCTATAGGTTAGATCACTGTCCTTATGTTCTATGTACCACTTTGTTTTATAAGTTTTGGCTGGTTGGTTTGCGAGCTCCTCGTACCTTATGTACCAGTTCTTTTGCGGATGTTCTGCATAATTTGTCGGCTTACGGGCAGCATTGTTCTTGTTGTTTTTGCATTTCCTTTATTGTCTAGAAACTCACGGTCTTTATTTTGATCGAATTATGAGGTTGAATTTTAGAACTGGCACATAGAATTTCTCAACAATATTTCTATCTGGTTGATTGCTGATATCTGGTTCAATTATGGTTTTTTTTAACAGATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGTGTGTTTATGCATCACTACATTGCTATCTCATTATAGACGGCTCCTTGAACATTCCTGAAAAACTTTTTTGATTTTGTAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAGAATGCTGGGTTAAAAGCACAAACCCTTTTCCATTTTATATATGCTGAATGCAAATTTTGACTTGGATCAATGACTTTTTAATTTAAATGATTTGGAATTAGCGTTGTATTCTTTCAGTTGCATTAGTCGTTCCAAGTTTCTTCTGCAAGAATTAATCAGTTTATCACTCTTGTTTATGCTGATTATGCTTCATTTACCTGCACGCATCAAGAATATGGTACGAGTTGTGTTGCTTTATTCTCCCTCATCCTTT

mRNA sequence

CGTGAGCGTTGATACAAACGCCAGTCAGCCGTCAGATCTAGGGCATCGAAGACTGAAATACCCTAATATACCGATATTCTTTTGTTTCAGTCTTACAATTCTCCAGCAACAGGTTTAGAGGATTCCGACGAGCGGAGAAGATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAGAATGCTGGGTTAAAAGCACAAACCCTTTTCCATTTTATATATGCTGAATGCAAATTTTGACTTGGATCAATGACTTTTTAATTTAAATGATTTGGAATTAGCGTTGTATTCTTTCAGTTGCATTAGTCGTTCCAAGTTTCTTCTGCAAGAATTAATCAGTTTATCACTCTTGTTTATGCTGATTATGCTTCATTTACCTGCACGCATCAAGAATATGGTACGAGTTGTGTTGCTTTATTCTCCCTCATCCTTT

Coding sequence (CDS)

ATGGTCCAGCGTCTCACTTACCGTAAGCGGCACAGCTATGCCACAAAGTCCAACCAGCACCGCGTCGTCAAAACTCCCGGTGGAAAGCTTGTGTACCAGACCACGAAGAAGAGGGCTAGTGGTCCTAAATGCCCTGTCACTGGAAAAAGAATTCAAGGAATTCCTCACTTAAGGCCTGCTGAATACAAGAGGTCTAGGCTGGCTAGGAACCGTAGGACTGTCAACCGCGCCTATGGTGGTGTACTGTCTGGAGGTGCTGTTAGGGAAAGGATTATAAGGGCTTTTTTGGTTGAAGAGCAAAAGATTGTGAAAAAGGTTTTGAAGATCCAGAAGGCAAAGGAAAAGCTTGCCTCCAAGAGTTAG

Protein sequence

MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Homology
[Close]
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match: RL34_TOBAC (60S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQSTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLA+KS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLAAKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match: RL34_PEA (60S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 5.6e-56
Identity = 113/120 (94.17%), Postives = 117/120 (97.50%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLTYRRRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQK KEK A+K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKTKEKQAAKN 120

[Close]
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match: RL341_ARATH (60S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 8.1e-55
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match: RL342_ARATH (60S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 4.0e-54
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match: RL343_ARATH (60S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 1.5e-53
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match: A0A059D9F6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03442 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match: A0A0A0LK03_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match: A0A059D8U9_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03433 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.0e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKN 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match: A0A0V0GZ92_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-56
Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRA+GPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRANGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match: I3NMK4_HEVBR (60S ribosomal protein L34A OS=Hevea brasiliensis GN=RPL34A PE=2 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 6.6e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEK AS+S
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TAIR10
Match: AT1G26880.1 (AT1G26880.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 214.2 bits (544), Expect = 4.5e-56
Identity = 110/120 (91.67%), Postives = 116/120 (96.67%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPKA 120

[Close]
BLAST of Cp4.1LG00g02510 vs. TAIR10
Match: AT1G69620.1 (AT1G69620.1 ribosomal protein L34)

HSP 1 Score: 211.8 bits (538), Expect = 2.3e-55
Identity = 109/119 (91.60%), Postives = 113/119 (94.96%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP 
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK 120
           EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLK+QKAKEK+A K
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKLQKAKEKVAPK 119

[Close]
BLAST of Cp4.1LG00g02510 vs. TAIR10
Match: AT3G28900.1 (AT3G28900.1 Ribosomal protein L34e superfamily protein)

HSP 1 Score: 209.9 bits (533), Expect = 8.6e-55
Identity = 109/120 (90.83%), Postives = 112/120 (93.33%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQKIVKKVLK+QKAKEK A KS
Sbjct: 61  EYKRSRLARNERTVNRAYGGVLSGVAVRERIVRAFLVEEQKIVKKVLKLQKAKEKTAPKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match: gi|702277736|ref|XP_010044743.1| (PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis])

HSP 1 Score: 226.9 bits (577), Expect = 1.9e-56
Identity = 119/120 (99.17%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match: gi|449459176|ref|XP_004147322.1| (PREDICTED: 60S ribosomal protein L34 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56
Identity = 119/120 (99.17%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSG AVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGSAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match: gi|702277691|ref|XP_010044733.1| (PREDICTED: 60S ribosomal protein L34-like [Eucalyptus grandis])

HSP 1 Score: 225.7 bits (574), Expect = 4.3e-56
Identity = 118/120 (98.33%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASK+
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKN 120

[Close]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match: gi|565376584|ref|XP_006354783.1| (PREDICTED: 60S ribosomal protein L34 [Solanum tuberosum])

HSP 1 Score: 224.9 bits (572), Expect = 7.3e-56
Identity = 116/120 (96.67%), Postives = 120/120 (100.00%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQTTKKRA+GPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLIYQTTKKRANGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRL+RNRRTVNRAYGGVLSGGAVRERI+RAFLVEEQKIVKKVLKIQKAKEKLASKS
Sbjct: 61  EYKRSRLSRNRRTVNRAYGGVLSGGAVRERIVRAFLVEEQKIVKKVLKIQKAKEKLASKS 120

[Close]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match: gi|313586461|gb|ADR71241.1| (60S ribosomal protein L34A [Hevea brasiliensis])

HSP 1 Score: 224.6 bits (571), Expect = 9.5e-56
Identity = 118/120 (98.33%), Postives = 119/120 (99.17%), Query Frame = 1 

Query: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60
           MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1   MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 60

Query: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKLASKS 120
           EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEK AS+S
Sbjct: 61  EYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 120

The following BLAST results are available for this feature:
BLAST of Cp4.1LG00g02510 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RL34_TOBAC1.5e-5695.0060S ribosomal protein L34 OS=Nicotiana tabacum GN=RPL34 PE=2 SV=1[more]
RL34_PEA5.6e-5694.1760S ribosomal protein L34 OS=Pisum sativum GN=RPL34 PE=2 SV=1[more]
RL341_ARATH8.1e-5591.6760S ribosomal protein L34-1 OS=Arabidopsis thaliana GN=RPL34A PE=2 SV=1[more]
RL342_ARATH4.0e-5491.6060S ribosomal protein L34-2 OS=Arabidopsis thaliana GN=RPL34B PE=3 SV=1[more]
RL343_ARATH1.5e-5390.8360S ribosomal protein L34-3 OS=Arabidopsis thaliana GN=RPL34C PE=2 SV=1[more]
BLAST of Cp4.1LG00g02510 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A059D9F6_EUCGR1.3e-5699.17Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03442 PE=4 SV=1[more]
A0A0A0LK03_CUCSA3.0e-5699.17Uncharacterized protein OS=Cucumis sativus GN=Csa_2G338890 PE=4 SV=1[more]
A0A059D8U9_EUCGR3.0e-5698.33Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B03433 PE=4 SV=1[more]
A0A0V0GZ92_SOLCH5.1e-5696.67Putative ovule protein OS=Solanum chacoense PE=4 SV=1[more]
I3NMK4_HEVBR6.6e-5698.3360S ribosomal protein L34A OS=Hevea brasiliensis GN=RPL34A PE=2 SV=1[more]
BLAST of Cp4.1LG00g02510 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G26880.14.5e-5691.67 Ribosomal protein L34e superfamily protein[more]
AT1G69620.12.3e-5591.60 ribosomal protein L34[more]
AT3G28900.18.6e-5590.83 Ribosomal protein L34e superfamily protein[more]
BLAST of Cp4.1LG00g02510 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|702277736|ref|XP_010044743.1|1.9e-5699.17PREDICTED: 60S ribosomal protein L34 [Eucalyptus grandis][more]
gi|449459176|ref|XP_004147322.1|4.3e-5699.17PREDICTED: 60S ribosomal protein L34 [Cucumis sativus][more]
gi|702277691|ref|XP_010044733.1|4.3e-5698.33PREDICTED: 60S ribosomal protein L34-like [Eucalyptus grandis][more]
gi|565376584|ref|XP_006354783.1|7.3e-5696.67PREDICTED: 60S ribosomal protein L34 [Solanum tuberosum][more]
gi|313586461|gb|ADR71241.1|9.5e-5698.3360S ribosomal protein L34A [Hevea brasiliensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR018065Ribosomal_L34e_CS
IPR008195Ribosomal_L34Ae
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG00g02510.1Cp4.1LG00g02510.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008195Ribosomal protein L34AePRINTSPR01250RIBOSOMALL34coord: 13..26
score: 1.9E-29coord: 44..54
score: 1.9E-29coord: 26..43
score: 1.9E-29coord: 66..88
score: 1.9
IPR008195Ribosomal protein L34AePANTHERPTHR1075960S RIBOSOMAL PROTEIN L34coord: 1..120
score: 1.3
IPR008195Ribosomal protein L34AePFAMPF01199Ribosomal_L34ecoord: 1..96
score: 3.0
IPR018065Ribosomal protein L34e, conserved sitePROSITEPS01145RIBOSOMAL_L34Ecoord: 15..28
scor
NoneNo IPR availablePANTHERPTHR10759:SF13SUBFAMILY NOT NAMEDcoord: 1..120
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG00g02510Cucurbita maxima (Rimu)cmacpeB025