Cp4.1LG00g01220.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTAGAGAACTGGAAGAAGACAATTAAGGCCCTATGCGGTGCGTTGGTATAAAAGGATGCAGCGTATGGAGACCACGAGAAACATTGCGAGCCCTAGCCCTCAGATCTGAACAACATCTCATTCCAACGCCATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTTAGAGATTATCATTTCTTATTTATATGTTTGGGTTTCTTGCGATTCGAGATCGGAGGTTAGAGATCTCGAAGTCTCTATTAGTATTCTGAACATGTTCGTCCATCTTTGAGGATTCATGCTGAGTTTTGCTACGGTTGAATCGATCTGATCGTTTTCTCTGTTTTCCCCCAATATACTCTAGGAAACTAATACCTAGTATTGGCCTTCATCAAATTTTTCCATGGATTCATTGTCCTTGCCCGAGACGAAACCGCCTACCAGGAACATGCTATTTATTATTATTTATTTTTTTTTTATGGAAATTTGACTTGGTGAAATGATTTTGGAAATACTTAGGAAGCGTTTACTTTTATGAAACTAATAACAAATATATGGATTTTTTTTTAGANTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATGGCGTTGGCCTTGGTGAGTAGAAATCATGATTAAGGTGAACAATTGATTTTAGTCAATAGTACATGGCTTCTTACTTTTTATTTTTGCTATTAGTTTTTTAGCTCCAGTTTTTGTGCTATTTTACGGAAGTTGTGTTAGATCTGCAGTTACTTTTATTCTGTTTCAATTGGGTTTCATTAGGTTTTGAGTTGTGGATGTACGAAGCTTATTGTTGCGTAATGTTTTGACTTTTTTATTTTTTATTTGGAGTAGATTTTCATCCCTCCCTTTCGCTTTTTCATGAGGAGAAATCAGCCTTTCTATATTCATATGTAAGTAGACTCTAAGACGAGCAATGGCACTTGGAATCTTGCAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGGTAACTCCCGTCTATTTCTCAACACTTGTGGCCTTTTGTAGTATTTGATTTGAAGCTAGTTTATTTCCCTGTGTTGTCATCCAGATGTTCTAATTGTTGATTCATTGATATTACTGTGAATTCACCTAAATAGGCTTGCCGTGTTCCTTACTAGCCTTTTTCTTCATAATGCCTCTTCAACTGATCCCCAAGTGCTGAAATGTTTTTTGCAACTTTGATCAACATGTTCGTCTTTTTCCATCTTACAAGTAGCCTGAACTATAAAAATATGTACATTCCTTTTCTACAATAATAGCCAAAAGTTTTGAAGAATGGTCAACCACCATTTGCGTCACAAATCTCCCTTCACTTGGAGTTTCAATCATAATTTAAGCAAAAATAAAACATACAAAAATTGCCTCTTATATCTGAATATGCTTCAGACAAGCACGTTAATAGTTTCTTGAAACATGATTGATTTCCACAATTTCCCTCGATTCCTTTACAAGTCTCCTTTGGGAAAATCACTTGCCCTTAAATCTATCTTTTGTGACATGATTAACTTTTTTGGCATCGATGCTATTAGGAACACTCTGGTCCCAATGTATCGTTGTGGTAAATCCATTTAGGCATTAGTTATGTGTCTTCCCTTGCTCTCTTCGCTTCTTTTTGCAGCTTAACAAAGTTCATCCTGAACCCTTGCTTAGGGCTTCCTCTCAATGGAAATCTTCATTTGCCCTCAAGTTTCAATACATAATTAACAAAGGAAGTTTGGAAAATCCCAGTCTATTCTTCTCAGTTTGGCTATAAAATGAAAAATTCAAAACTTCCAAAGCAAGTGAAATTCTCTATGGGAACTTTTGAGTTGAAGTGTTAACATTCACTCAAATCCCTTGATAATGTCCCTTATGATCTCACTGTGTCTATGAACACCCTCATTTTCAGCACTTAAAACCGTTCTCTTTATTCCTTGATGGTCATCTTTCTAATAGTGATGGCTTAATGGCCACAATGTTTGATGGTTTATTTTTTGCCTATTTGTTGGCTTGATAGGAAAGGAACCAGTCTTTTGGTTATGGCGAATAGAATCCCATGTTATACTCGATGTTTTATCATTGAACCATGTTTTAGGTTATAATTCTTAAGTTTGGATATGTTAAAGCTTGTGCTGGGAGTTTATTTTAAGAAACAGGGGTCAGTATACTGTTTGAATTGTGCTTATAAATGGGGTTTAGTTTGTGTGACCTATGTTCATCCTTTTTGTTTTTGGTTTGGGATTTATAAGAAATTTAAATAATTTACATGTTTACCATTTTTTGTATAGAAAATTCATTTCTACATTAAATTTGGTAAAAATATCATAATATTTTTCTTTTGTAATCAGCCAGTACAGTAAGTAGTTTACTACCGTTGTCAACCGTGTAATCTTTTTGAATAATTATTTTGTAATGTGAATATTCAACTACTTTTGTAATTGCTTCTCAAATATTCACCAAGGTGCGATGAAGTGTGCATAAATTCTTTCGAACAGGCCAAGCTTTCTGAACCATTGTTATCTTTGTAGTTCTTTCTTGATGTTAATTTTGTGTTTCATCCCTTATGAAATTGTCTTACCTTTCTGGAAAAACTTTTGGGAACATCACCATTTTTCAAACTTCAGGAAGGAAACCTCCAAATTTGCCCATCCAACTAATTTACAAACCCTCCAATCATCTTCTTTTTTGAAAATGCATCCTCTTTGTGTGGAATCTGCATTAACTCTAGCGCTTATGATTGCTATGGTTTATAGAGGAATGTGAAGGTAATTGTAAATTTGGAGGAATGAAAAGAATACTGAGCTTGGTTTATGAATTTTGTTTGTCCTTCTTTGATCATTCAATGATCACTTGTGTCTCTTTCAAAGTTTTAGGAGATGGTAAATATTCTAACAAATAGTTGGGGGATGTGTGTATTCATTGTACAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTGCTATCAGTTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGGAGAGGAACCTTAGATGAAAAGTTGGAGGTGGTCACACACACACACACACTTTTTTTTTTCTTTTTCATTAAAAAATTCTTACTTCCCTTCCTCGCTACACTCATTTGCAGAGTTCACCCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAACCCGGTTCTGCCAACTTATTTTCTCATAATAAATGTCACACTTGTTAGAGACTACCTATTTTCAATGCATTATATTACGATGAACTTCAACATTTCTGGGTTTTATTTATTTATTTATTTATTCTTCAATTAAGAACGAAATAAACAAAAGTATCTGATT TTTAGAGAACTGGAAGAAGACAATTAAGGCCCTATGCGGTGCGTTGGTATAAAAGGATGCAGCGTATGGAGACCACGAGAAACATTGCGAGCCCTAGCCCTCAGATCTGAACAACATCTCATTCCAACGCCATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAATTGCATAATATATGGTTGATGCTTCTTCCAATCTACAATTTTTTGCTATCAGTTTTCCCCATCATCGTTAAAATAAGAACATTGAGAGGAGAGGAACCTTAGATGAAAAGTTGGAGGTGGTCACACACACACACACACTTTTTTTTTTCTTTTTCATTAAAAAATTCTTACTTCCCTTCCTCGCTACACTCATTTGCAGAGTTCACCCCATTTGTAGCTTACATTATTGTTATGTGAACATAACTGCTACAATTTTTTTGGCCAACCCGGTTCTGCCAACTTATTTTCTCATAATAAATGTCACACTTGTTAGAGACTACCTATTTTCAATGCATTATATTACGATGAACTTCAACATTTCTGGGTTTTATTTATTTATTTATTTATTCTTCAATTAAGAACGAAATAAACAAAAGTATCTGATT ATGGCCAGCTTTGACGAAGCCCCTCCCGGCAATTCCAAAGCTGGAGAGAAGATTTTCAAGACCAAATGCGCTCAGTGCCACACTGTCGACAAGGGTGCTGGTCACAAGCAAGGTCCCAATTTGAATGGGCTATTTGGACGGCAATCTGGCACAACTGCTGGATACTCTTATTCTGCTGCCAACAAGAATATGGCCGTGATATGGGAAGAAAAGACCTTGTATGACTACTTGCTTAACCCCAAGAAGTATATTCCTGGAACAAAGATGGTTTTCCCAGGGCTGAAGAAACCGCAGGATCGTGCCGACCTTATTGCTTATCTGAAGGAAGCAACTGCTTAA MASFDEAPPGNSKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAGYSYSAANKNMAVIWEEKTLYDYLLNPKKYIPGTKMVFPGLKKPQDRADLIAYLKEATA
BLAST of Cp4.1LG00g01220.1 vs. Swiss-Prot
Match: CYC_VIGRR (Cytochrome c OS=Vigna radiata var. radiata PE=1 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 1.7e-59 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. Swiss-Prot
Match: CYC_CUCMA (Cytochrome c OS=Cucurbita maxima PE=1 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.3e-59 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. Swiss-Prot
Match: CYC_BRANA (Cytochrome c OS=Brassica napus PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 3.9e-59 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. Swiss-Prot
Match: CYC_BRAOL (Cytochrome c OS=Brassica oleracea PE=1 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 3.9e-59 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. Swiss-Prot
Match: CYC2_ARATH (Cytochrome c-2 OS=Arabidopsis thaliana GN=CYTC-2 PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 2.1e-57 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TrEMBL
Match: A0A0S3RSC9_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.04G064500 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TrEMBL
Match: A0A0L9U2E1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan03g036400 PE=3 SV=1) HSP 1 Score: 231.5 bits (589), Expect = 5.1e-58 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TrEMBL
Match: A0A078FH37_BRANA (BnaA07g10260D protein OS=Brassica napus GN=BnaC07g13460D PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TrEMBL
Match: A0A0A0KPD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G244150 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57 Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TrEMBL
Match: M4D786_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 2.5e-57 Identity = 109/112 (97.32%), Postives = 110/112 (98.21%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TAIR10
Match: AT4G10040.1 (AT4G10040.1 cytochrome c-2) HSP 1 Score: 222.6 bits (566), Expect = 1.2e-58 Identity = 105/112 (93.75%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. TAIR10
Match: AT1G22840.1 (AT1G22840.1 CYTOCHROME C-1) HSP 1 Score: 221.1 bits (562), Expect = 3.5e-58 Identity = 104/112 (92.86%), Postives = 108/112 (96.43%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. NCBI nr
Match: gi|950955084|ref|XP_014496567.1| (PREDICTED: cytochrome c [Vigna radiata var. radiata]) HSP 1 Score: 231.5 bits (589), Expect = 7.3e-58 Identity = 109/112 (97.32%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. NCBI nr
Match: gi|118013|sp|P00052.1|CYC_VIGRR (RecName: Full=Cytochrome c) HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57 Identity = 108/111 (97.30%), Postives = 110/111 (99.10%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. NCBI nr
Match: gi|729296184|ref|XP_010542745.1| (PREDICTED: cytochrome c [Tarenaya hassleriana]) HSP 1 Score: 229.6 bits (584), Expect = 2.8e-57 Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. NCBI nr
Match: gi|449457373|ref|XP_004146423.1| (PREDICTED: cytochrome c [Cucumis sativus]) HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57 Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 1
BLAST of Cp4.1LG00g01220.1 vs. NCBI nr
Match: gi|117976|sp|P00051.1|CYC_CUCMA (RecName: Full=Cytochrome c) HSP 1 Score: 229.2 bits (583), Expect = 3.6e-57 Identity = 109/111 (98.20%), Postives = 109/111 (98.20%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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