CmoCh20G010850.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAACAAATTCATTCCTTATAAAATCCTAAATTCTCTCGCAAATTTCTCTCCATCTCTCTTTCTGAACTTTTTCTTCTTCTTCCTTGGAGAGAAAATAGGTGATCCAATCAAGCCGAGGAGAAATGGGAGCTTGTGCGACTAAGCCGAAGGTTGACGCCGGCAAGGCTCCGGCACCTGAGCCGGAGAACAAGGATGTTGATGCTGTAGTCGCTGTTCAACCGGAGAAGAACGTTGAGGTTCCGGTGGTGGAAGTTGCCGGAGAGGGAAACCAAAGCGATAAAGGCAAGGAAGTTGTTGTTGATGACGACGACAATAAGGCGGATGATCAGAGAGTTAAAACCCGCTCACTTAGCAACTTGTTTAAAGAGGTATTTCGCAATCTTCGTCTATTTTAGTTTCCTCGATTTTGTTTCGATTTTCTTCCGATTATCGATTGCTAATCGTTCTTTGAATGTCTATTGAGAATCTGATGCTGTTTTTGTTGAGTATAATTAAATATATTGTTTGAGAAATTCATCGTTGTTCTTTTTTTTCTCTGTTTATCGTTGAAATTCTTTCTCGCTATTTGTTGTTCGTTGAATGGATTGTGCTGGTTGATTTTGAAATTAGGGGACTCTGCGGCTGTTTGGTTCTTGAGAAAGAAATGGGAGAAAAAGTATAAGAAAATGAAGAATATGCTATTGATACCTGGAGTTTCTCTGTTTCTGAATTGAATATTTTATAGCCTTTTCATTTTTTCATTCGGAGCCTCTGGAGTTTATTCGCGAATCACGGCGGTTTATCGGGAACCAAACAGATTTGTTTACTCTTTTCCAGAAAAAAAACCTTTATCCTCTTTTGGACGTAAAGCGAACTGAACAGTCGTCCCAAAGGTAAAAAGCGATGTAAATAATTGCAATTATACTTTCCAAAATGGCCCACTTCTTCGTAATTTATGACTTGTCGGCATCCTAGAATTTAGAGATTCAAACTTTCAAGGAAAAATTTCACCTCATTTCCAATGGTTTCCTTTTCGATTCAAGAACTCTGTTGGTTTGATTGGACGTTCCGAGACTTCGATAATTTAGGTTCGAATCTTTTGCACTAAAGAATCAATACATAGAATCTTCCATAATCCACAACACATTCGTTTGGTGACAAACAAAAGTGTCTTTCCTTGAGGGGCCCCCCTTTTTCCTCATCTTTCTTCTATGGCTGTTTCATGGCTCATTGAACCTTACCTGTTTGGCTGCACCTTATAGAGGTTTCTTTCCTTCCCATGTGATCTTGATGGGAAAAGGGTTGATGCATTTTTCACCCGCACGTTCGGATACGGCATGTCCCCAGGGCCCTAGTTATGCATTCCTGCAACCAGAAAAACACAGTTGGATTCGAGTAAATATTGATCTGTAGGTTATGTTGATAGTTGGCCTTAGGATCAGCTGACCTTCCATGGGTCGTACTTTTATTGTCTCTGCTTGTAACGACCCTAAGCCCACCGCTAGAAGATATTGTCCTCTTTGGGCTTTTCTTTTCGAGCTTTCCCTCAAGGTTTTTAAAACGCGGATACCAAGGAGAGGTTTTCACACTCTTATAAAGAATACTCCGTTCTCCTCCCCAACCAATGTGGGATCTCACACCGCTCCTAATAGTTTGTTGTTTGTGCATTGCTTGGAAAATGACTGTTGATCAATATGATCTTGCATTGCCAACTGGTGGGTGCCCAAATTGATTTTGTATTATAAATGAGATGTGTGTTCGTAAATGGTTAGCTAGCTTAGCTGTAGCTGTGCTTTGAAGTTGTCGGTTTGAACTGCTTCAAAATATGGGACACAAAGTTTGGTTTGATCTACTCAGATCAATTTTGTTTTGAAAAATATGTTATGGCAGCTAAAACTTTCTTTGCTTATAGTCTAAATCTGAATATACTGCAGAAAGAAGGGAGTGAATCAAATGAATGTGAGAAGCCAGCAGGGGAAATAAAGGCACCTCAAACTGAACTAGAAACTGAAAAGTGTATAGAAGAGCCCCAAACAGAGGTGCCTCAAACGGTTGTCGAGACCGAAAAACATATCGACGAAGCGGAGACGAAGGTGCCTCAAACTGTAGTAGAGCCTGAAAAACATACAGATAAAGCCGAACCAAATGCGCCTGAAACCGAGTCAGAAAGGATACAGATCGCTGATGTTGTTCCCACAACTTCTGAGACCCTTCCTGAGGAGAAAGTAATCTTGCCTTCACCACCTGATGAAACTGAAGTAGTGACATTAGTTGAAGCAACACCAGCAGCAGATGAGACCAAAGCATCTGAGAAGAAAAAAGAAGATATCATTGATGTCGAGAAGACCGAGATGGAGACACCGAAAGAAACCGACTCGAAGCCCGCTGCTCCAACGGAAACCAGTACCGAGCCAGCACAACAAAACGATGAAGTAGTGAAGGTAATTGGTGAGGAGAAAATAACAAGCTGATGAAAAGTGAAGTATTGAAAGTATAAGAAGACGCCTTTGTTGTTGGCTGTTTAAATTTATGATGTGGGAGAAACTTTGCCCAAAGAAGACGTGGCTGCAATCTGCCATGATGATCAAGGTTAGATTGTTGTGTTTGGAGGCTTTGTTTCTATTGTTTTGTTGTATATCATTTGTTGGTTTTTCGTTGAGTTGCTCATCCTCTTTCCTTTGCTTTGCATGTAGACATACGAGTTTGTAAGATTAATATGAACATAGAATGCCCTCTTTTAAATGTGAAATTTACAATTCTTCATGATTTTGACTCTGAAATTTGCCTCAACTTTATGCTCATTTCTGTCTTTGAAACTATTTCTAAA GAACAAATTCATTCCTTATAAAATCCTAAATTCTCTCGCAAATTTCTCTCCATCTCTCTTTCTGAACTTTTTCTTCTTCTTCCTTGGAGAGAAAATAGGTGATCCAATCAAGCCGAGGAGAAATGGGAGCTTGTGCGACTAAGCCGAAGGTTGACGCCGGCAAGGCTCCGGCACCTGAGCCGGAGAACAAGGATGTTGATGCTGTAGTCGCTGTTCAACCGGAGAAGAACGTTGAGGTTCCGGTGGTGGAAGTTGCCGGAGAGGGAAACCAAAGCGATAAAGGCAAGGAAGTTGTTGTTGATGACGACGACAATAAGGCGGATGATCAGAGAGTTAAAACCCGCTCACTTAGCAACTTGTTTAAAGAGAAAGAAGGGAGTGAATCAAATGAATGTGAGAAGCCAGCAGGGGAAATAAAGGCACCTCAAACTGAACTAGAAACTGAAAAGTGTATAGAAGAGCCCCAAACAGAGGTGCCTCAAACGGTTGTCGAGACCGAAAAACATATCGACGAAGCGGAGACGAAGGTGCCTCAAACTGTAGTAGAGCCTGAAAAACATACAGATAAAGCCGAACCAAATGCGCCTGAAACCGAGTCAGAAAGGATACAGATCGCTGATGTTGTTCCCACAACTTCTGAGACCCTTCCTGAGGAGAAAGTAATCTTGCCTTCACCACCTGATGAAACTGAAGTAGTGACATTAGTTGAAGCAACACCAGCAGCAGATGAGACCAAAGCATCTGAGAAGAAAAAAGAAGATATCATTGATGTCGAGAAGACCGAGATGGAGACACCGAAAGAAACCGACTCGAAGCCCGCTGCTCCAACGGAAACCAGTACCGAGCCAGCACAACAAAACGATGAAGTAGTGAAGGTAATTGGTGAGGAGAAAATAACAAGCTGATGAAAAGTGAAGTATTGAAAGTATAAGAAGACGCCTTTGTTGTTGGCTGTTTAAATTTATGATGTGGGAGAAACTTTGCCCAAAGAAGACGTGGCTGCAATCTGCCATGATGATCAAGGTTAGATTGTTGTGTTTGGAGGCTTTGTTTCTATTGTTTTGTTGTATATCATTTGTTGGTTTTTCGTTGAGTTGCTCATCCTCTTTCCTTTGCTTTGCATGTAGACATACGAGTTTGTAAGATTAATATGAACATAGAATGCCCTCTTTTAAATGTGAAATTTACAATTCTTCATGATTTTGACTCTGAAATTTGCCTCAACTTTATGCTCATTTCTGTCTTTGAAACTATTTCTAAA ATGGGAGCTTGTGCGACTAAGCCGAAGGTTGACGCCGGCAAGGCTCCGGCACCTGAGCCGGAGAACAAGGATGTTGATGCTGTAGTCGCTGTTCAACCGGAGAAGAACGTTGAGGTTCCGGTGGTGGAAGTTGCCGGAGAGGGAAACCAAAGCGATAAAGGCAAGGAAGTTGTTGTTGATGACGACGACAATAAGGCGGATGATCAGAGAGTTAAAACCCGCTCACTTAGCAACTTGTTTAAAGAGAAAGAAGGGAGTGAATCAAATGAATGTGAGAAGCCAGCAGGGGAAATAAAGGCACCTCAAACTGAACTAGAAACTGAAAAGTGTATAGAAGAGCCCCAAACAGAGGTGCCTCAAACGGTTGTCGAGACCGAAAAACATATCGACGAAGCGGAGACGAAGGTGCCTCAAACTGTAGTAGAGCCTGAAAAACATACAGATAAAGCCGAACCAAATGCGCCTGAAACCGAGTCAGAAAGGATACAGATCGCTGATGTTGTTCCCACAACTTCTGAGACCCTTCCTGAGGAGAAAGTAATCTTGCCTTCACCACCTGATGAAACTGAAGTAGTGACATTAGTTGAAGCAACACCAGCAGCAGATGAGACCAAAGCATCTGAGAAGAAAAAAGAAGATATCATTGATGTCGAGAAGACCGAGATGGAGACACCGAAAGAAACCGACTCGAAGCCCGCTGCTCCAACGGAAACCAGTACCGAGCCAGCACAACAAAACGATGAAGTAGTGAAGGTAATTGGTGAGGAGAAAATAACAAGCTGA
BLAST of CmoCh20G010850.1 vs. TrEMBL
Match: A0A0A0LQ67_CUCSA (Zonadhesin OS=Cucumis sativus GN=Csa_2G301490 PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 4.9e-56 Identity = 176/340 (51.76%), Postives = 200/340 (58.82%), Query Frame = 1
BLAST of CmoCh20G010850.1 vs. TrEMBL
Match: A0A067KU05_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09483 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.1e-06 Identity = 94/277 (33.94%), Postives = 130/277 (46.93%), Query Frame = 1
BLAST of CmoCh20G010850.1 vs. NCBI nr
Match: gi|659121982|ref|XP_008460915.1| (PREDICTED: probable serine/threonine-protein kinase kinX [Cucumis melo]) HSP 1 Score: 231.5 bits (589), Expect = 1.7e-57 Identity = 176/325 (54.15%), Postives = 196/325 (60.31%), Query Frame = 1
BLAST of CmoCh20G010850.1 vs. NCBI nr
Match: gi|449459296|ref|XP_004147382.1| (PREDICTED: neurofilament medium polypeptide-like [Cucumis sativus]) HSP 1 Score: 226.1 bits (575), Expect = 7.1e-56 Identity = 176/340 (51.76%), Postives = 200/340 (58.82%), Query Frame = 1
BLAST of CmoCh20G010850.1 vs. NCBI nr
Match: gi|802615811|ref|XP_012075313.1| (PREDICTED: variable charge X-linked protein 3B [Jatropha curcas]) HSP 1 Score: 61.2 bits (147), Expect = 3.0e-06 Identity = 94/277 (33.94%), Postives = 130/277 (46.93%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
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