CmoCh20G006130.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh20G006130.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	APO RNA-binding protein
Location	Cmo_Chr20 : 3005585 .. 3009939 (-)
Sequence length	1188

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGGTTTCATCCGTGAGCTTATATTTATAATGGGGAAGAACAAAAAGGGCGAGCTGAGATGGGTAAAAGTGAATTAATTATCGTTTTAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGGTAAATTCGAAGGAAAATACATTTTGATTTTGGCTTCAATTTTTTCTCTTGGTTCTTATCTACAGAGATTGATGGAAACTTGTCCGTTGTGAGGTGCATTTGCAGAGCACGCAAAGGAAACCCATCCCTCTCTGCCTCCATACTTATCTCTGTCATCATCTTCATCTTCTTCAATCTTTGTTAATTGTTCTTCGGGCTTTTCTTAATCTGATATCTGTTCATGTATCAATTTTCAGTGGGAATGGTTAAATTCACCCGTTGTTGACGTATGCAGGTCAAAATTAGCGTCTGATGATGAAACTCAGAACGGTTCATCGGAACTTCCAACTTCCATACCCAGAGATGATGTCTAAAACCCGACGTGTCGAATCCATTTGTTGACACGACTTATGATGGACGGACGTGCGATGTGTCGTAATGAGAATGCAAAAGGGTAACCGATTTATTTTTCTATAATATAGTTTCTGCATGCATTTGAGCCTACACTTTCTGGATGGTTTTAGTATATAATTTAGTTAAATTATATTTGTTGATGATAATTAAAGTAATTAATCTTATTGTATAAGATTATAATGTATTTTTGGAGTGTAGAAATATTCTAAAATTCATTTAATTTTGAGGATAAAACTGATGACAGCCGGTTGAGTAAGGAAATGAATGAAATGATCCGTAGGGGTTGAAGGGATTGAAACCAGGTGTCAACCATGACCTGGACTTCTATCCATTAATAAACTTTTGAGTATGGAAATGAATTAGTTTGTAATTAATGGACGAATCTGGGAGATATTATCTATATTATATATCGTTGTCAGCTTCACAATTTTAGTATGCAGATGTTAAGGAGAGGTTTTTACATTCATACACCTCCTTAAAGGCTCAATGCGTTATCACTGGCACATAGCTCAGTGCACTCTGTCCAATGAGCAGACTTTGGTGCCTACACTGATACCATTTCTAACATTTAAAGTTTACTGCTAGTAAATATTGTCTGCTTAATCGTTTAATCGTTTATAATAATTAATAAATGGATGAGGATTAAAATGGGTTTGATGGAGGTGGTGGCTGCATCGGGAGGCGTGAGAATGAAATTGGGTTATCTTGGGAGGGTGGAAAATGGGCCCAAGAGGACCCATTGAATAGCGACCTTGGGCATCCCATAGATTGGGTTACCCTTTTTAGCACTTCGAGGTATTTCTCAAAACATTTTCTGTTTTATTTATTTATTTATTTATTTTATAAGAAAATAATAATAATAATAATAACAACAATGTGTCTATTTTTGTCCTATTCTCTCAATTTTGATGGCACAAAATTATTTGGTAAGAACATAGATGCATACATTTATATTTCTTTATTTTCAATTACATTCGGAGAATCACCACGTCTCGAAGAGTCACATTCTATTGATTTCAATTATTATATTTATTAACTCAACAAGAAGAGTTGTGTCTCGTGATGACCCTAGCATTTCCTGCAATATGGTCACGTTACCTATTTTTCGTTTCTTAAAAGTGAAGGCTATCCTTACGAATTAACACGAGTCTTTCCAACATGTTTTGTCTTTATTCACATGCATCATAAAAATTAGCAACGTAAAATTGCTCTAAGTAAATGATAAAGAAGAAATTAAAATTATATTTTAAAAAGAATATAGAATAAAATATTATATAACTTAAAAAATGAAGAAAAATTAAAAATAAAGAGACCAAAATGACCTTTTTAACCTAACTACTATCAATAAAACTATTTTTTTTTATGAAATTTTAATTTTAATTAAATTGGAAAAAATTGAGCATAGACCATTTGAGGTAATCAAACCCGAAAGTAAACCGGAATCTGAAGCATTGAATCGATGAATCGAGCTGCGCAGACCGATTCGGAGTAATGTGAAGGTGAGAGACTCGACCCCCAATAGTATGGTCGGGTTCGGTTCTCGATCATTTTAAGACTAGCCACTGAGTGAATCGGACCGGCTTTCCTCTAATTTGGTTCATTTTGATCCCTTGCCCTCGTTTCTGTGGCGCCCTCGTTTTCCCTCTGGACAAGTGGAACTGCAAATTAATTCTATGGAAATGCCTGTTCTTCCTCCTGTCTGAGCAAATCTGGCTTCAATGCTCCGTCGGCGTCGCTGTTAGTTGTTTCATCTTGTCTTTCAAGCGCTGTGTCTCTCTGCGGTCTTCTCTCGAAATCTCATCCTTCGTTCTTTGAACTCTCAATCTTACTCGCAGTCCGAGCACTTTCGCCGTTGAATTCGAAGGCTCATGTGATTGGATTAAGATCTTAATTTATTCCTTCAAGCTTGTCGCTGGTCGTTTTCCTAAGATTTGGTAAATGTTAGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAGTCAGTGTCCCTTGAACAAACTATCTTTAATTTCTCAATTTTGTGTGATGATTTTACTCTGTTTCGTTTTCTTTTACTTAGTTTTTATCTGAAGTTGCATGTCCCTTGAGCTAGTATGTGTAGTAGGGATGTACCATTTTGAAATGCTGATTGGCCTTGCTTATCATCTAGCTATTACCTGACCATTCCTGCGCGGGTAGTGAGTTCAAAAAATTCATCAATGCATATTATCTAGTTCTTTATGCACAATTGGGCCGTCTGTGAAGTCTGTTCTTTCTGAAATTTTGATTGAACAATCCTGAGGTATTAATATGAATGCATGTTTGTGAATGCTGCTTCTAAAATTCGTAGATTACTGAAGGTGCCCGGAATTCATGAATTCTCTGGTAAAGGGGAGTCGAGGTTGAATTCTTTGGGCCCTTTGTATACACCGCCCGTCGCTCCTACCAATTGAATGGTCATGTGAAGTGTTCGGATTGTGACGACGTGAGCGGTTCGCTGCCTGCGACGTCGCGAGAAGTCCACTGAACTTTATCATTTAGAGGAAGGAGAAGTTGTAACAAGGTTTCCATAGGTGAACCTGCAGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCGTGAACACGTTTAAGTCTGTTCTTTTTGAAGATTATATTAAAAACTCTCAGCTGTTAACGTGAATACATGTTTGTGAAGGCTGTTTCTGAAACTTGTAGGATCATTTTGTTGTTTTTATAGATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA

mRNA sequence

ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA

Coding sequence (CDS)

ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA

Homology

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BLAST of CmoCh20G006130.1 vs. Swiss-Prot
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.9e-95
Identity = 160/301 (53.16%), Postives = 214/301 (71.10%), Query Frame = 1


Query: 95  DLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPE 154
           DL+KLRPM+LKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 155 VYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNF 214
           V+VG++GHLI +C  Y R   N++HEW  G +ND+LVPVE++H H++ + V  H ER ++
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 215 ERVPAVVELCWQAGASTNDE---------NPSSSTWNSVGGGGGSGRDEPLSGNEMRLLA 274
           +RVPA++ELC QAGA   +E         NP  S  +             L   +++ + 
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQYSEIHDNPQISEEDI----------RSLPAGDLKYVG 213

Query: 275 TETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEK 334
              L AWE VR GV+KLL+VYP+K+CK C +VHVGPS H+AR CGVFK ESWRG+H+WEK
Sbjct: 214 ANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEK 273

Query: 335 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQG 387
           A V+DLVP K+VWHRRPQDP VLVDEGR YYG +PA+++LC+  G I P KY C+MK QG
Sbjct: 274 AGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQG 324

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BLAST of CmoCh20G006130.1 vs. Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55
Identity = 116/306 (37.91%), Postives = 165/306 (53.92%), Query Frame = 1


Query: 112 NNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYK 171
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 126 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 185

Query: 172 RGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGAST 231
              +  +HEWT   + DV+VP+EA+H      K   HDER +  RVPAVVELC Q G   
Sbjct: 186 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 245

Query: 232 NDENPSSSTWNSVGGGGGS---GRDE--------------------------PLSGNEMR 291
             E P+      +   G S     DE                          P S  E  
Sbjct: 246 -PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETV 305

Query: 292 LLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHF 351
            LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ H+A+ CG FK +   G H 
Sbjct: 306 SLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHG 365

Query: 352 WEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMK 388
           W+ A +DDL+PP+ VWH    + P +  E R +YGQ+PAV+ +C QAG + P  Y   M+
Sbjct: 366 WQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMR 425

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BLAST of CmoCh20G006130.1 vs. Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.8e-49
Identity = 113/326 (34.66%), Postives = 165/326 (50.61%), Query Frame = 1


Query: 97  KKLRPM-VLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEV 156
           KKL  M + K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 103 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 162

Query: 157 YVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFE 216
           +V   GH IR C G     +   H W +G +NDVL+PVE++H +  F +  +H+ R  +E
Sbjct: 163 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 222

Query: 217 RVPAVVELCWQAGASTND---------------------------ENPSSSTWNS----- 276
           R+PA+VELC QAG    +                           E P +S+  S     
Sbjct: 223 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 282

Query: 277 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 336
           +   G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 283 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 342

Query: 337 HQARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAV 389
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG++PA+
Sbjct: 343 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 402

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BLAST of CmoCh20G006130.1 vs. Swiss-Prot
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-21
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1


Query: 261 MRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGS 320
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  H+ R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 321 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHC 380
           H W++A +DD+V P  VWH R P D  VL +  + +YG++PAV+ +C Q G   P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 381 RMKVQGLPPPQSHLKL 396
            M++  + P +  + L
Sbjct: 385 MMRLDVVYPQRDEVDL 400

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BLAST of CmoCh20G006130.1 vs. TrEMBL
Match: A0A0A0LQG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 6.6e-153
Identity = 260/325 (80.00%), Postives = 290/325 (89.23%), Query Frame = 1


Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G L D++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAGA+ +D+N +SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYG +PAV+
Sbjct: 241 HKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALCTQAG IAP KYHC MKVQGL P
Sbjct: 301 ALCTQAGVIAPFKYHCMMKVQGLSP 324

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BLAST of CmoCh20G006130.1 vs. TrEMBL
Match: A0A061EHU0_THECC (APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.3e-119
Identity = 205/302 (67.88%), Postives = 245/302 (81.13%), Query Frame = 1


Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R YSSKVDLKKLRPM+LKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW  GGLND+LVPVEAFH H+MF+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H +R +FERVPAVVELCWQAGA  NDEN +S +  +    GG    E LS +++ ++A  
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSGSLVADEFYGGVRGIESLSHDDLTVIANG 189

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TLRAWET+R+GV KLL+VYP K+CKYCS+VHVGPS H+AR CGVF+ ESWRG+HFW+KA 
Sbjct: 190 TLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKKAG 249

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VDDLVPPKIVW RRPQDP VL+DEGRDYYG +PAV+ LC+ AG I P KY C MKV GLP
Sbjct: 250 VDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSGLP 309

Query: 388 PP 390
            P
Sbjct: 310 AP 311

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BLAST of CmoCh20G006130.1 vs. TrEMBL
Match: F6HIK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118
Identity = 206/324 (63.58%), Postives = 254/324 (78.40%), Query Frame = 1


Query: 70  MALRRKFCENIVQE---FVLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQ 129
           MALR K     + E   F ++ R YS KVDLKKLRPM+LKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 130 VFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGG 189
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEW  G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 190 LNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVG 249
           LND+LVPVE FH   MF+ V +H +R +F+RVPAV ELC QAGA  ++EN SSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 250 GGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQ 309
              G    + LS +E++ +AT TLRAWE +R+G+++LL+VYP K+CKYCS+VHVGPS H+
Sbjct: 181 TFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHK 240

Query: 310 ARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLAL 369
           AR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YG +PAV+ L
Sbjct: 241 ARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDL 300

Query: 370 CTQAGTIAPPKYHCRMKVQGLPPP 390
           CT+AG IAP +YH  MKVQGLP P
Sbjct: 301 CTKAGAIAPARYHSMMKVQGLPGP 324

[Close]

BLAST of CmoCh20G006130.1 vs. TrEMBL
Match: A0A151R7A7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.3e-116
Identity = 189/302 (62.58%), Postives = 247/302 (81.79%), Query Frame = 1


Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R Y++KVDL+KLRPM+LKRI+ RA   P++ ++P+A++V +AR +LIHGVSTLLK  P++
Sbjct: 14  RLYATKVDLRKLRPMILKRIEKRAQAYPVRAMVPIAKEVLQARNVLIHGVSTLLKFLPLM 73

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPE+Y+GE+GHLI++C GYK   KN+VHEW +GGLNDVLVPVE+FH ++M++ V  
Sbjct: 74  ACKFCPEIYIGEQGHLIQTCWGYKHRAKNRVHEWVKGGLNDVLVPVESFHLNNMYQNVIR 133

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H+ER +F+R+PAVVELCWQAGA  +DEN +S  WN   G G     E LS N++  +A +
Sbjct: 134 HNERFDFDRIPAVVELCWQAGADAHDENLNSGNWNLDTGNGSILETESLSPNDLVSIANK 193

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TL AWET+R+GV+KLL+VYP K+CKYCS+VHVGPS H+AR CGVFK ESW+G+HFW KA+
Sbjct: 194 TLTAWETLRSGVEKLLLVYPVKVCKYCSEVHVGPSGHKARLCGVFKYESWKGAHFWIKAN 253

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VD+LVPPK+VW RRP DPPVLV+EG+D+YG+ PAVL LC++AG I P KY+C MKVQGL 
Sbjct: 254 VDNLVPPKVVWRRRPHDPPVLVNEGKDFYGRVPAVLDLCSKAGAIVPAKYNCMMKVQGLS 313

Query: 388 PP 390
            P
Sbjct: 314 AP 315

[Close]

BLAST of CmoCh20G006130.1 vs. TrEMBL
Match: U5FMZ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 203/327 (62.08%), Postives = 254/327 (77.68%), Query Frame = 1


Query: 70  MALRRKFCENIVQEF----VLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQ 129
           MALR+K  ENIV+EF     +H R YSS+VD KKLRPM+LKRIQNRA + P+KG++PVA+
Sbjct: 1   MALRKKLWENIVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 130 QVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRG 189
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEW  G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 190 GLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSV 249
           GLND+LVPVE F   +MF+ V EHD+R +F+RVPAVVELC QAGA+ +DEN      +  
Sbjct: 121 GLNDILVPVETFRLDNMFQDVIEHDQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 250 GGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVH 309
           GG G     EP S + +  +A E L AWE +R+GVQ+LL+VYP+K+CK+CS+VH+GPS H
Sbjct: 181 GGIGHIDGGEPFSPSHLMYIAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGH 240

Query: 310 QARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLA 369
           +AR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDP VLV+EGRD+YG +PAV+ 
Sbjct: 241 KARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWRRRPQDPLVLVNEGRDFYGHAPAVVD 300

Query: 370 LCTQAGTIAPPKYHCRMKVQGLPPPQS 392
           LCT+ G I P KY C MK+QGL  P S
Sbjct: 301 LCTKTGIIVPTKYSCMMKIQGLSAPVS 327

[Close]

BLAST of CmoCh20G006130.1 vs. TAIR10
Match: AT3G21740.1 (AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 349.0 bits (894), Expect = 3.9e-96
Identity = 160/301 (53.16%), Postives = 214/301 (71.10%), Query Frame = 1


Query: 95  DLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPE 154
           DL+KLRPM+LKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 155 VYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNF 214
           V+VG++GHLI +C  Y R   N++HEW  G +ND+LVPVE++H H++ + V  H ER ++
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 215 ERVPAVVELCWQAGASTNDE---------NPSSSTWNSVGGGGGSGRDEPLSGNEMRLLA 274
           +RVPA++ELC QAGA   +E         NP  S  +             L   +++ + 
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQYSEIHDNPQISEEDI----------RSLPAGDLKYVG 213

Query: 275 TETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEK 334
              L AWE VR GV+KLL+VYP+K+CK C +VHVGPS H+AR CGVFK ESWRG+H+WEK
Sbjct: 214 ANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEK 273

Query: 335 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQG 387
           A V+DLVP K+VWHRRPQDP VLVDEGR YYG +PA+++LC+  G I P KY C+MK QG
Sbjct: 274 AGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQG 324

[Close]

BLAST of CmoCh20G006130.1 vs. TAIR10
Match: AT5G57930.2 (AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 218.4 bits (555), Expect = 7.9e-57
Identity = 116/306 (37.91%), Postives = 165/306 (53.92%), Query Frame = 1


Query: 112 NNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYK 171
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 129 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 188

Query: 172 RGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGAST 231
              +  +HEWT   + DV+VP+EA+H      K   HDER +  RVPAVVELC Q G   
Sbjct: 189 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 248

Query: 232 NDENPSSSTWNSVGGGGGS---GRDE--------------------------PLSGNEMR 291
             E P+      +   G S     DE                          P S  E  
Sbjct: 249 -PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETV 308

Query: 292 LLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHF 351
            LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ H+A+ CG FK +   G H 
Sbjct: 309 SLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHG 368

Query: 352 WEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMK 388
           W+ A +DDL+PP+ VWH    + P +  E R +YGQ+PAV+ +C QAG + P  Y   M+
Sbjct: 369 WQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMR 428

[Close]

BLAST of CmoCh20G006130.1 vs. TAIR10
Match: AT1G64810.2 (AT1G64810.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-50
Identity = 113/326 (34.66%), Postives = 165/326 (50.61%), Query Frame = 1


Query: 97  KKLRPM-VLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEV 156
           KKL  M + K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 127 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 186

Query: 157 YVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFE 216
           +V   GH IR C G     +   H W +G +NDVL+PVE++H +  F +  +H+ R  +E
Sbjct: 187 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 246

Query: 217 RVPAVVELCWQAGASTND---------------------------ENPSSSTWNS----- 276
           R+PA+VELC QAG    +                           E P +S+  S     
Sbjct: 247 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 306

Query: 277 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 336
           +   G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 307 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 366

Query: 337 HQARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAV 389
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG++PA+
Sbjct: 367 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 426

[Close]

BLAST of CmoCh20G006130.1 vs. TAIR10
Match: AT5G61930.1 (AT5G61930.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1


Query: 261 MRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGS 320
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  H+ R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 321 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHC 380
           H W++A +DD+V P  VWH R P D  VL +  + +YG++PAV+ +C Q G   P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 381 RMKVQGLPPPQSHLKL 396
            M++  + P +  + L
Sbjct: 385 MMRLDVVYPQRDEVDL 400

[Close]

BLAST of CmoCh20G006130.1 vs. NCBI nr
Match: gi|449468339|ref|XP_004151879.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 9.5e-153
Identity = 260/325 (80.00%), Postives = 290/325 (89.23%), Query Frame = 1


Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G L D++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAGA+ +D+N +SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYG +PAV+
Sbjct: 241 HKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALCTQAG IAP KYHC MKVQGL P
Sbjct: 301 ALCTQAGVIAPFKYHCMMKVQGLSP 324

[Close]

BLAST of CmoCh20G006130.1 vs. NCBI nr
Match: gi|659111656|ref|XP_008455841.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 8.9e-151
Identity = 256/325 (78.77%), Postives = 288/325 (88.62%), Query Frame = 1


Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA + PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKSYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCK+CPEVYVG +GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKYCPEVYVGAEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G LND++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAG + +D++ +SST NS
Sbjct: 121 GDLNDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCCQAGVNPDDKDLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEP S +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPFSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVFK ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+GRDYYG +PAV+
Sbjct: 241 HKARLCGVFKYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGRDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALC QAG IAP KYHC MKVQGL P
Sbjct: 301 ALCMQAGAIAPFKYHCMMKVQGLSP 324

[Close]

BLAST of CmoCh20G006130.1 vs. NCBI nr
Match: gi|590652086|ref|XP_007033060.1| (APO protein 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 438.0 bits (1125), Expect = 1.8e-119
Identity = 205/302 (67.88%), Postives = 245/302 (81.13%), Query Frame = 1


Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R YSSKVDLKKLRPM+LKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW  GGLND+LVPVEAFH H+MF+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H +R +FERVPAVVELCWQAGA  NDEN +S +  +    GG    E LS +++ ++A  
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSGSLVADEFYGGVRGIESLSHDDLTVIANG 189

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TLRAWET+R+GV KLL+VYP K+CKYCS+VHVGPS H+AR CGVF+ ESWRG+HFW+KA 
Sbjct: 190 TLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKKAG 249

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VDDLVPPKIVW RRPQDP VL+DEGRDYYG +PAV+ LC+ AG I P KY C MKV GLP
Sbjct: 250 VDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSGLP 309

Query: 388 PP 390
            P
Sbjct: 310 AP 311

[Close]

BLAST of CmoCh20G006130.1 vs. NCBI nr
Match: gi|359485666|ref|XP_002273999.2| (PREDICTED: APO protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 434.1 bits (1115), Expect = 2.6e-118
Identity = 206/324 (63.58%), Postives = 254/324 (78.40%), Query Frame = 1


Query: 70  MALRRKFCENIVQE---FVLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQ 129
           MALR K     + E   F ++ R YS KVDLKKLRPM+LKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 130 VFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGG 189
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEW  G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 190 LNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVG 249
           LND+LVPVE FH   MF+ V +H +R +F+RVPAV ELC QAGA  ++EN SSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 250 GGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQ 309
              G    + LS +E++ +AT TLRAWE +R+G+++LL+VYP K+CKYCS+VHVGPS H+
Sbjct: 181 TFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHK 240

Query: 310 ARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLAL 369
           AR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YG +PAV+ L
Sbjct: 241 ARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDL 300

Query: 370 CTQAGTIAPPKYHCRMKVQGLPPP 390
           CT+AG IAP +YH  MKVQGLP P
Sbjct: 301 CTKAGAIAPARYHSMMKVQGLPGP 324

[Close]

BLAST of CmoCh20G006130.1 vs. NCBI nr
Match: gi|743883363|ref|XP_011037010.1| (PREDICTED: APO protein 4, mitochondrial [Populus euphratica])

HSP 1 Score: 428.7 bits (1101), Expect = 1.1e-116
Identity = 202/327 (61.77%), Postives = 254/327 (77.68%), Query Frame = 1


Query: 70  MALRRKFCENIVQEF----VLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQ 129
           MA  +K  EN+V+EF     +H R YSS+VD KKLRPM+LKRIQNRA + P+KG++PVA+
Sbjct: 1   MAFTKKLWENLVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 130 QVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRG 189
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEW  G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 190 GLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSV 249
           GLND+LVPVE F  H+MF+ V EH++R +F+RVPAVVELC QAGA+ +DEN      +  
Sbjct: 121 GLNDILVPVETFRLHNMFQDVIEHNQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 250 GGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVH 309
           GG G     EP S + +   A E L AWE +R+GVQ+LL+VYP+K+CK+CS+VH+GPS H
Sbjct: 181 GGIGHIDGGEPFSPSHLMHTAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGH 240

Query: 310 QARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLA 369
           +AR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDPPVLV+EGRD+YG +PAV+ 
Sbjct: 241 KARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWWRRPQDPPVLVNEGRDFYGHAPAVVD 300

Query: 370 LCTQAGTIAPPKYHCRMKVQGLPPPQS 392
           LCT+ G I PPKY C MK+QGL  P S
Sbjct: 301 LCTKTGIIVPPKYSCMMKIQGLSAPVS 327

The following BLAST results are available for this feature:

BLAST of CmoCh20G006130.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
APO4_ARATH	6.9e-95	53.16	APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2	[more]
APO2_ARATH	1.4e-55	37.91	APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1	[more]
APO1_ARATH	9.8e-49	34.66	APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1	[more]
APO3_ARATH	2.3e-21	35.29	APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1	[more]

BLAST of CmoCh20G006130.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LQG5_CUCSA	6.6e-153	80.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1	[more]
A0A061EHU0_THECC	1.3e-119	67.88	APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1	[more]
F6HIK2_VITVI	1.8e-118	63.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=...	[more]
A0A151R7A7_CAJCA	1.3e-116	62.58	Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1	[more]
U5FMZ8_POPTR	1.7e-116	62.08	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1	[more]

BLAST of CmoCh20G006130.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G21740.1	3.9e-96	53.16	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G57930.2	7.9e-57	37.91	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT1G64810.2	5.5e-50	34.66	Arabidopsis thaliana protein of unknown function (DUF794)	[more]
AT5G61930.1	1.3e-22	35.29	Arabidopsis thaliana protein of unknown function (DUF794)	[more]

BLAST of CmoCh20G006130.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449468339\|ref\|XP_004151879.1\|	9.5e-153	80.00	PREDICTED: APO protein 4, mitochondrial [Cucumis sativus]	[more]
gi\|659111656\|ref\|XP_008455841.1\|	8.9e-151	78.77	PREDICTED: APO protein 4, mitochondrial [Cucumis melo]	[more]
gi\|590652086\|ref\|XP_007033060.1\|	1.8e-119	67.88	APO protein 4 isoform 1 [Theobroma cacao]	[more]
gi\|359485666\|ref\|XP_002273999.2\|	2.6e-118	63.58	PREDICTED: APO protein 4, mitochondrial [Vitis vinifera]	[more]
gi\|743883363\|ref\|XP_011037010.1\|	1.1e-116	61.77	PREDICTED: APO protein 4, mitochondrial [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR023342	APO_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003723	RNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh20G006130	CmoCh20G006130	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh20G006130.1	CmoCh20G006130.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G006130.1.CDS.4	CmoCh20G006130.1.CDS.4	CDS
CmoCh20G006130.1.CDS.3	CmoCh20G006130.1.CDS.3	CDS
CmoCh20G006130.1.CDS.2	CmoCh20G006130.1.CDS.2	CDS
CmoCh20G006130.1.CDS.1	CmoCh20G006130.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh20G006130.1.exon.4	CmoCh20G006130.1.exon.4	exon
CmoCh20G006130.1.exon.3	CmoCh20G006130.1.exon.3	exon
CmoCh20G006130.1.exon.2	CmoCh20G006130.1.exon.2	exon
CmoCh20G006130.1.exon.1	CmoCh20G006130.1.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023342	APO domain	PFAM	PF05634	APO_RNA-bind	coord: 92..231 score: 8.1E-39coord: 264..382 score: 8.2
IPR023342	APO domain	PROFILE	PS51499	APO	coord: 148..233 score: 19.947coord: 290..375 score: 19
None	No IPR available	PANTHER	PTHR10388	EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1	coord: 41..366 score: 2.8E
None	No IPR available	PANTHER	PTHR10388:SF20	APO PROTEIN 4, MITOCHONDRIAL	coord: 41..366 score: 2.8E