CmoCh20G006130 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh20G006130
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionAPO RNA-binding protein
LocationCmo_Chr20 : 3005585 .. 3009939 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGGTTTCATCCGTGAGCTTATATTTATAATGGGGAAGAACAAAAAGGGCGAGCTGAGATGGGTAAAAGTGAATTAATTATCGTTTTAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGGTAAATTCGAAGGAAAATACATTTTGATTTTGGCTTCAATTTTTTCTCTTGGTTCTTATCTACAGAGATTGATGGAAACTTGTCCGTTGTGAGGTGCATTTGCAGAGCACGCAAAGGAAACCCATCCCTCTCTGCCTCCATACTTATCTCTGTCATCATCTTCATCTTCTTCAATCTTTGTTAATTGTTCTTCGGGCTTTTCTTAATCTGATATCTGTTCATGTATCAATTTTCAGTGGGAATGGTTAAATTCACCCGTTGTTGACGTATGCAGGTCAAAATTAGCGTCTGATGATGAAACTCAGAACGGTTCATCGGAACTTCCAACTTCCATACCCAGAGATGATGTCTAAAACCCGACGTGTCGAATCCATTTGTTGACACGACTTATGATGGACGGACGTGCGATGTGTCGTAATGAGAATGCAAAAGGGTAACCGATTTATTTTTCTATAATATAGTTTCTGCATGCATTTGAGCCTACACTTTCTGGATGGTTTTAGTATATAATTTAGTTAAATTATATTTGTTGATGATAATTAAAGTAATTAATCTTATTGTATAAGATTATAATGTATTTTTGGAGTGTAGAAATATTCTAAAATTCATTTAATTTTGAGGATAAAACTGATGACAGCCGGTTGAGTAAGGAAATGAATGAAATGATCCGTAGGGGTTGAAGGGATTGAAACCAGGTGTCAACCATGACCTGGACTTCTATCCATTAATAAACTTTTGAGTATGGAAATGAATTAGTTTGTAATTAATGGACGAATCTGGGAGATATTATCTATATTATATATCGTTGTCAGCTTCACAATTTTAGTATGCAGATGTTAAGGAGAGGTTTTTACATTCATACACCTCCTTAAAGGCTCAATGCGTTATCACTGGCACATAGCTCAGTGCACTCTGTCCAATGAGCAGACTTTGGTGCCTACACTGATACCATTTCTAACATTTAAAGTTTACTGCTAGTAAATATTGTCTGCTTAATCGTTTAATCGTTTATAATAATTAATAAATGGATGAGGATTAAAATGGGTTTGATGGAGGTGGTGGCTGCATCGGGAGGCGTGAGAATGAAATTGGGTTATCTTGGGAGGGTGGAAAATGGGCCCAAGAGGACCCATTGAATAGCGACCTTGGGCATCCCATAGATTGGGTTACCCTTTTTAGCACTTCGAGGTATTTCTCAAAACATTTTCTGTTTTATTTATTTATTTATTTATTTTATAAGAAAATAATAATAATAATAATAACAACAATGTGTCTATTTTTGTCCTATTCTCTCAATTTTGATGGCACAAAATTATTTGGTAAGAACATAGATGCATACATTTATATTTCTTTATTTTCAATTACATTCGGAGAATCACCACGTCTCGAAGAGTCACATTCTATTGATTTCAATTATTATATTTATTAACTCAACAAGAAGAGTTGTGTCTCGTGATGACCCTAGCATTTCCTGCAATATGGTCACGTTACCTATTTTTCGTTTCTTAAAAGTGAAGGCTATCCTTACGAATTAACACGAGTCTTTCCAACATGTTTTGTCTTTATTCACATGCATCATAAAAATTAGCAACGTAAAATTGCTCTAAGTAAATGATAAAGAAGAAATTAAAATTATATTTTAAAAAGAATATAGAATAAAATATTATATAACTTAAAAAATGAAGAAAAATTAAAAATAAAGAGACCAAAATGACCTTTTTAACCTAACTACTATCAATAAAACTATTTTTTTTTATGAAATTTTAATTTTAATTAAATTGGAAAAAATTGAGCATAGACCATTTGAGGTAATCAAACCCGAAAGTAAACCGGAATCTGAAGCATTGAATCGATGAATCGAGCTGCGCAGACCGATTCGGAGTAATGTGAAGGTGAGAGACTCGACCCCCAATAGTATGGTCGGGTTCGGTTCTCGATCATTTTAAGACTAGCCACTGAGTGAATCGGACCGGCTTTCCTCTAATTTGGTTCATTTTGATCCCTTGCCCTCGTTTCTGTGGCGCCCTCGTTTTCCCTCTGGACAAGTGGAACTGCAAATTAATTCTATGGAAATGCCTGTTCTTCCTCCTGTCTGAGCAAATCTGGCTTCAATGCTCCGTCGGCGTCGCTGTTAGTTGTTTCATCTTGTCTTTCAAGCGCTGTGTCTCTCTGCGGTCTTCTCTCGAAATCTCATCCTTCGTTCTTTGAACTCTCAATCTTACTCGCAGTCCGAGCACTTTCGCCGTTGAATTCGAAGGCTCATGTGATTGGATTAAGATCTTAATTTATTCCTTCAAGCTTGTCGCTGGTCGTTTTCCTAAGATTTGGTAAATGTTAGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAGTCAGTGTCCCTTGAACAAACTATCTTTAATTTCTCAATTTTGTGTGATGATTTTACTCTGTTTCGTTTTCTTTTACTTAGTTTTTATCTGAAGTTGCATGTCCCTTGAGCTAGTATGTGTAGTAGGGATGTACCATTTTGAAATGCTGATTGGCCTTGCTTATCATCTAGCTATTACCTGACCATTCCTGCGCGGGTAGTGAGTTCAAAAAATTCATCAATGCATATTATCTAGTTCTTTATGCACAATTGGGCCGTCTGTGAAGTCTGTTCTTTCTGAAATTTTGATTGAACAATCCTGAGGTATTAATATGAATGCATGTTTGTGAATGCTGCTTCTAAAATTCGTAGATTACTGAAGGTGCCCGGAATTCATGAATTCTCTGGTAAAGGGGAGTCGAGGTTGAATTCTTTGGGCCCTTTGTATACACCGCCCGTCGCTCCTACCAATTGAATGGTCATGTGAAGTGTTCGGATTGTGACGACGTGAGCGGTTCGCTGCCTGCGACGTCGCGAGAAGTCCACTGAACTTTATCATTTAGAGGAAGGAGAAGTTGTAACAAGGTTTCCATAGGTGAACCTGCAGAAGGATCATTGTCGATGCCTAAACATCAAACGACCCGTGAACACGTTTAAGTCTGTTCTTTTTGAAGATTATATTAAAAACTCTCAGCTGTTAACGTGAATACATGTTTGTGAAGGCTGTTTCTGAAACTTGTAGGATCATTTTGTTGTTTTTATAGATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA

mRNA sequence

ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA

Coding sequence (CDS)

ATGTTCAAACAAACCATTGAAGGAACAGAGAAGGAGGTAGCCATTGCCAGAACTTGGTTCTTCTTTCTCGACAACAACAAAACTCAGCTCAGCTCAGCTCAGCACAGCTCAATGCAGAAGATAAGAAGAGAAGGCTACAGAAACCAAGAACGTTCATCCATTGTGTTCTGCTGTATATGCGCTTGCACCATGAAAACTATGCCTTTTATGGCTCTTAGAAGGAAGTTCTGTGAGAATATTGTGCAGGAATTCGTGCTACATCGATGCTACAGTTCTAAAGTCGACTTGAAGAAGCTTCGTCCAATGGTTTTGAAGAGAATTCAAAATCGGGCTAATAACTGTCCTATAAAAGGTCTAATTCCAGTGGCACAGCAAGTCTTTGAAGCTAGGGCAATGCTTATTCATGGAGTTTCCACTCTTCTCAAAGCATTTCCGGTTGTCTCTTGCAAATTTTGTCCAGAAGTATATGTTGGTGAGAAAGGTCATCTGATACGAAGCTGTGGCGGTTACAAACGCGGGCCTAAGAATCAGGTTCATGAGTGGACCAGAGGTGGTTTGAATGATGTCCTTGTCCCAGTAGAAGCATTTCACCGTCATCACATGTTCGAAAAGGTTAATGAACATGATGAGAGGCTAAATTTTGAGCGTGTTCCAGCAGTTGTGGAACTCTGCTGGCAAGCTGGAGCCAGTACAAATGATGAAAATCCGTCTTCAAGCACTTGGAATTCAGTTGGTGGTGGTGGAGGCTCAGGCAGGGATGAACCTTTATCCGGTAATGAGATGAGGCTTTTGGCAACCGAAACTCTCAGGGCGTGGGAAACGGTTCGAACGGGCGTGCAGAAACTGTTAATGGTATATCCTACTAAGATCTGTAAATACTGCTCAGACGTTCATGTTGGGCCATCAGTACACCAAGCTAGACCATGTGGAGTTTTTAAATGTGAGAGTTGGCGAGGATCCCACTTCTGGGAGAAGGCGGATGTAGATGATTTAGTTCCTCCAAAGATCGTATGGCATCGGCGACCTCAAGATCCTCCCGTGCTCGTTGATGAAGGGAGGGATTATTACGGGCAATCGCCAGCAGTCCTGGCTCTTTGCACACAGGCTGGTACCATTGCACCACCTAAGTATCATTGTAGGATGAAAGTTCAAGGCTTACCACCACCTCAGAGTCACCTCAAGCTATGA
Homology
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BLAST of CmoCh20G006130 vs. Swiss-Prot
Match: APO4_ARATH (APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.9e-95
Identity = 160/301 (53.16%), Postives = 214/301 (71.10%), Query Frame = 1 

Query: 95  DLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPE 154
           DL+KLRPM+LKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 155 VYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNF 214
           V+VG++GHLI +C  Y R   N++HEW  G +ND+LVPVE++H H++ + V  H ER ++
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 215 ERVPAVVELCWQAGASTNDE---------NPSSSTWNSVGGGGGSGRDEPLSGNEMRLLA 274
           +RVPA++ELC QAGA   +E         NP  S  +             L   +++ + 
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQYSEIHDNPQISEEDI----------RSLPAGDLKYVG 213

Query: 275 TETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEK 334
              L AWE VR GV+KLL+VYP+K+CK C +VHVGPS H+AR CGVFK ESWRG+H+WEK
Sbjct: 214 ANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEK 273

Query: 335 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQG 387
           A V+DLVP K+VWHRRPQDP VLVDEGR YYG +PA+++LC+  G I P KY C+MK QG
Sbjct: 274 AGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQG 324

[Close]
BLAST of CmoCh20G006130 vs. Swiss-Prot
Match: APO2_ARATH (APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 1.4e-55
Identity = 116/306 (37.91%), Postives = 165/306 (53.92%), Query Frame = 1 

Query: 112 NNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYK 171
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 126 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 185

Query: 172 RGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGAST 231
              +  +HEWT   + DV+VP+EA+H      K   HDER +  RVPAVVELC Q G   
Sbjct: 186 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 245

Query: 232 NDENPSSSTWNSVGGGGGS---GRDE--------------------------PLSGNEMR 291
             E P+      +   G S     DE                          P S  E  
Sbjct: 246 -PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETV 305

Query: 292 LLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHF 351
            LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ H+A+ CG FK +   G H 
Sbjct: 306 SLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHG 365

Query: 352 WEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMK 388
           W+ A +DDL+PP+ VWH    + P +  E R +YGQ+PAV+ +C QAG + P  Y   M+
Sbjct: 366 WQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMR 425

[Close]
BLAST of CmoCh20G006130 vs. Swiss-Prot
Match: APO1_ARATH (APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.8e-49
Identity = 113/326 (34.66%), Postives = 165/326 (50.61%), Query Frame = 1 

Query: 97  KKLRPM-VLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEV 156
           KKL  M + K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 103 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 162

Query: 157 YVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFE 216
           +V   GH IR C G     +   H W +G +NDVL+PVE++H +  F +  +H+ R  +E
Sbjct: 163 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 222

Query: 217 RVPAVVELCWQAGASTND---------------------------ENPSSSTWNS----- 276
           R+PA+VELC QAG    +                           E P +S+  S     
Sbjct: 223 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 282

Query: 277 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 336
           +   G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 283 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 342

Query: 337 HQARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAV 389
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG++PA+
Sbjct: 343 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 402

[Close]
BLAST of CmoCh20G006130 vs. Swiss-Prot
Match: APO3_ARATH (APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.3e-21
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 261 MRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGS 320
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  H+ R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 321 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHC 380
           H W++A +DD+V P  VWH R P D  VL +  + +YG++PAV+ +C Q G   P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 381 RMKVQGLPPPQSHLKL 396
            M++  + P +  + L
Sbjct: 385 MMRLDVVYPQRDEVDL 400

[Close]
BLAST of CmoCh20G006130 vs. TrEMBL
Match: A0A0A0LQG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1)

HSP 1 Score: 548.5 bits (1412), Expect = 6.6e-153
Identity = 260/325 (80.00%), Postives = 290/325 (89.23%), Query Frame = 1 

Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G L D++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAGA+ +D+N +SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYG +PAV+
Sbjct: 241 HKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALCTQAG IAP KYHC MKVQGL P
Sbjct: 301 ALCTQAGVIAPFKYHCMMKVQGLSP 324

[Close]
BLAST of CmoCh20G006130 vs. TrEMBL
Match: A0A061EHU0_THECC (APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 1.3e-119
Identity = 205/302 (67.88%), Postives = 245/302 (81.13%), Query Frame = 1 

Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R YSSKVDLKKLRPM+LKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW  GGLND+LVPVEAFH H+MF+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H +R +FERVPAVVELCWQAGA  NDEN +S +  +    GG    E LS +++ ++A  
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSGSLVADEFYGGVRGIESLSHDDLTVIANG 189

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TLRAWET+R+GV KLL+VYP K+CKYCS+VHVGPS H+AR CGVF+ ESWRG+HFW+KA 
Sbjct: 190 TLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKKAG 249

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VDDLVPPKIVW RRPQDP VL+DEGRDYYG +PAV+ LC+ AG I P KY C MKV GLP
Sbjct: 250 VDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSGLP 309

Query: 388 PP 390
            P
Sbjct: 310 AP 311

[Close]
BLAST of CmoCh20G006130 vs. TrEMBL
Match: F6HIK2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 1.8e-118
Identity = 206/324 (63.58%), Postives = 254/324 (78.40%), Query Frame = 1 

Query: 70  MALRRKFCENIVQE---FVLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQ 129
           MALR K     + E   F ++ R YS KVDLKKLRPM+LKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 130 VFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGG 189
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEW  G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 190 LNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVG 249
           LND+LVPVE FH   MF+ V +H +R +F+RVPAV ELC QAGA  ++EN SSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 250 GGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQ 309
              G    + LS +E++ +AT TLRAWE +R+G+++LL+VYP K+CKYCS+VHVGPS H+
Sbjct: 181 TFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHK 240

Query: 310 ARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLAL 369
           AR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YG +PAV+ L
Sbjct: 241 ARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDL 300

Query: 370 CTQAGTIAPPKYHCRMKVQGLPPP 390
           CT+AG IAP +YH  MKVQGLP P
Sbjct: 301 CTKAGAIAPARYHSMMKVQGLPGP 324

[Close]
BLAST of CmoCh20G006130 vs. TrEMBL
Match: A0A151R7A7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 1.3e-116
Identity = 189/302 (62.58%), Postives = 247/302 (81.79%), Query Frame = 1 

Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R Y++KVDL+KLRPM+LKRI+ RA   P++ ++P+A++V +AR +LIHGVSTLLK  P++
Sbjct: 14  RLYATKVDLRKLRPMILKRIEKRAQAYPVRAMVPIAKEVLQARNVLIHGVSTLLKFLPLM 73

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPE+Y+GE+GHLI++C GYK   KN+VHEW +GGLNDVLVPVE+FH ++M++ V  
Sbjct: 74  ACKFCPEIYIGEQGHLIQTCWGYKHRAKNRVHEWVKGGLNDVLVPVESFHLNNMYQNVIR 133

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H+ER +F+R+PAVVELCWQAGA  +DEN +S  WN   G G     E LS N++  +A +
Sbjct: 134 HNERFDFDRIPAVVELCWQAGADAHDENLNSGNWNLDTGNGSILETESLSPNDLVSIANK 193

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TL AWET+R+GV+KLL+VYP K+CKYCS+VHVGPS H+AR CGVFK ESW+G+HFW KA+
Sbjct: 194 TLTAWETLRSGVEKLLLVYPVKVCKYCSEVHVGPSGHKARLCGVFKYESWKGAHFWIKAN 253

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VD+LVPPK+VW RRP DPPVLV+EG+D+YG+ PAVL LC++AG I P KY+C MKVQGL 
Sbjct: 254 VDNLVPPKVVWRRRPHDPPVLVNEGKDFYGRVPAVLDLCSKAGAIVPAKYNCMMKVQGLS 313

Query: 388 PP 390
            P
Sbjct: 314 AP 315

[Close]
BLAST of CmoCh20G006130 vs. TrEMBL
Match: U5FMZ8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 203/327 (62.08%), Postives = 254/327 (77.68%), Query Frame = 1 

Query: 70  MALRRKFCENIVQEF----VLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQ 129
           MALR+K  ENIV+EF     +H R YSS+VD KKLRPM+LKRIQNRA + P+KG++PVA+
Sbjct: 1   MALRKKLWENIVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 130 QVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRG 189
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEW  G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 190 GLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSV 249
           GLND+LVPVE F   +MF+ V EHD+R +F+RVPAVVELC QAGA+ +DEN      +  
Sbjct: 121 GLNDILVPVETFRLDNMFQDVIEHDQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 250 GGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVH 309
           GG G     EP S + +  +A E L AWE +R+GVQ+LL+VYP+K+CK+CS+VH+GPS H
Sbjct: 181 GGIGHIDGGEPFSPSHLMYIAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGH 240

Query: 310 QARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLA 369
           +AR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDP VLV+EGRD+YG +PAV+ 
Sbjct: 241 KARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWRRRPQDPLVLVNEGRDFYGHAPAVVD 300

Query: 370 LCTQAGTIAPPKYHCRMKVQGLPPPQS 392
           LCT+ G I P KY C MK+QGL  P S
Sbjct: 301 LCTKTGIIVPTKYSCMMKIQGLSAPVS 327

[Close]
BLAST of CmoCh20G006130 vs. TAIR10
Match: AT3G21740.1 (AT3G21740.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 349.0 bits (894), Expect = 3.9e-96
Identity = 160/301 (53.16%), Postives = 214/301 (71.10%), Query Frame = 1 

Query: 95  DLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPE 154
           DL+KLRPM+LKRI+NRA + P+K ++PVA+++  AR  LI  ++ LLK FPV++CKFC E
Sbjct: 34  DLRKLRPMILKRIENRAKDYPVKEIVPVAEEILIARKNLISNIAALLKVFPVLTCKFCSE 93

Query: 155 VYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNF 214
           V+VG++GHLI +C  Y R   N++HEW  G +ND+LVPVE++H H++ + V  H ER ++
Sbjct: 94  VFVGKEGHLIETCRSYIRRGNNRLHEWVPGSINDILVPVESYHLHNISQGVIRHQERFDY 153

Query: 215 ERVPAVVELCWQAGASTNDE---------NPSSSTWNSVGGGGGSGRDEPLSGNEMRLLA 274
           +RVPA++ELC QAGA   +E         NP  S  +             L   +++ + 
Sbjct: 154 DRVPAILELCCQAGAIHPEEILQYSEIHDNPQISEEDI----------RSLPAGDLKYVG 213

Query: 275 TETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEK 334
              L AWE VR GV+KLL+VYP+K+CK C +VHVGPS H+AR CGVFK ESWRG+H+WEK
Sbjct: 214 ANALMAWEKVRAGVKKLLLVYPSKVCKRCKEVHVGPSGHKARLCGVFKYESWRGTHYWEK 273

Query: 335 ADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQG 387
           A V+DLVP K+VWHRRPQDP VLVDEGR YYG +PA+++LC+  G I P KY C+MK QG
Sbjct: 274 AGVNDLVPEKMVWHRRPQDPVVLVDEGRSYYGHAPAIVSLCSHTGAIVPVKYACKMKPQG 324

[Close]
BLAST of CmoCh20G006130 vs. TAIR10
Match: AT5G57930.2 (AT5G57930.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 218.4 bits (555), Expect = 7.9e-57
Identity = 116/306 (37.91%), Postives = 165/306 (53.92%), Query Frame = 1 

Query: 112 NNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYK 171
           N   +K L+P+A +V+ AR  LI+ +  L+K   V +C +C E++VG  GH  +SC G  
Sbjct: 129 NGMVVKSLVPLAYKVYNARIRLINNLHRLMKVVRVNACGWCNEIHVGPYGHPFKSCKGPN 188

Query: 172 RGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGAST 231
              +  +HEWT   + DV+VP+EA+H      K   HDER +  RVPAVVELC Q G   
Sbjct: 189 TSQRKGLHEWTNSVIEDVIVPLEAYHLFDRLGKRIRHDERFSIPRVPAVVELCIQGGVEI 248

Query: 232 NDENPSSSTWNSVGGGGGS---GRDE--------------------------PLSGNEMR 291
             E P+      +   G S     DE                          P S  E  
Sbjct: 249 -PEFPAKRRRKPIIRIGKSEFVDADETELPDPEPQPPPVPLLTELPVSEITPPSSEEETV 308

Query: 292 LLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHF 351
            LA ETL+AWE +R G +KL+ +Y  ++C YC +VHVGP+ H+A+ CG FK +   G H 
Sbjct: 309 SLAEETLQAWEEMRAGAKKLMRMYRVRVCGYCPEVHVGPTGHKAQNCGAFKHQQRNGQHG 368

Query: 352 WEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMK 388
           W+ A +DDL+PP+ VWH    + P +  E R +YGQ+PAV+ +C QAG + P  Y   M+
Sbjct: 369 WQSAVLDDLIPPRYVWHVPDVNGPPMQRELRSFYGQAPAVVEICAQAGAVVPEHYRATMR 428

[Close]
BLAST of CmoCh20G006130 vs. TAIR10
Match: AT1G64810.2 (AT1G64810.2 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 195.7 bits (496), Expect = 5.5e-50
Identity = 113/326 (34.66%), Postives = 165/326 (50.61%), Query Frame = 1 

Query: 97  KKLRPM-VLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVVSCKFCPEV 156
           KKL  M + K++    N   +  L+PVA QV +   +LI G++ LL   PV +C  C  V
Sbjct: 127 KKLAQMGIEKQLDPPKNGLLVPNLVPVADQVIDNWKLLIKGLAQLLHVVPVFACSECGAV 186

Query: 157 YVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNEHDERLNFE 216
           +V   GH IR C G     +   H W +G +NDVL+PVE++H +  F +  +H+ R  +E
Sbjct: 187 HVANVGHNIRDCNGPTNSQRRGSHSWVKGTINDVLIPVESYHMYDPFGRRIKHETRFEYE 246

Query: 217 RVPAVVELCWQAGASTND---------------------------ENPSSSTWNS----- 276
           R+PA+VELC QAG    +                           E P +S+  S     
Sbjct: 247 RIPALVELCIQAGVEIPEYPCRRRTQPIRMMGKRVIDRGGYHKEPEKPQTSSSLSSPLAE 306

Query: 277 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 336
           +   G   R  P +  ++  +A ET+ A+E VR GV KL+  +  K C YCS+VHVGP  
Sbjct: 307 LDTLGVFERYPPPTPEDIPKIAQETMDAYEKVRLGVTKLMRKFTVKACGYCSEVHVGPWG 366

Query: 337 HQARPCGVFKCESWR-GSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAV 389
           H  + CG FK   WR G H W+ A VD++ PP  VWH R      L    R +YG++PA+
Sbjct: 367 HSVKLCGEFK-HQWRDGKHGWQDALVDEVFPPNYVWHVRDLKGNPLTGNLRRFYGKAPAL 426

[Close]
BLAST of CmoCh20G006130 vs. TAIR10
Match: AT5G61930.1 (AT5G61930.1 Arabidopsis thaliana protein of unknown function (DUF794))

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22
Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1 

Query: 261 MRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGS 320
           ++ L+ ET+ +W  +  GV+KL+  Y    C YC ++ VGP  H+ R C   K +   G 
Sbjct: 265 LKELSFETMESWFEMVLGVRKLMERYRVWTCGYCPEIQVGPKGHKVRMCKATKHQMRDGM 324

Query: 321 HFWEKADVDDLVPPKIVWH-RRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHC 380
           H W++A +DD+V P  VWH R P D  VL +  + +YG++PAV+ +C Q G   P +Y+ 
Sbjct: 325 HAWQEATIDDVVGPTYVWHVRDPTDGSVLDNSLKRFYGKAPAVIEMCVQGGAPVPDQYNS 384

Query: 381 RMKVQGLPPPQSHLKL 396
            M++  + P +  + L
Sbjct: 385 MMRLDVVYPQRDEVDL 400

[Close]
BLAST of CmoCh20G006130 vs. NCBI nr
Match: gi|449468339|ref|XP_004151879.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis sativus])

HSP 1 Score: 548.5 bits (1412), Expect = 9.5e-153
Identity = 260/325 (80.00%), Postives = 290/325 (89.23%), Query Frame = 1 

Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA N PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKNYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCKFCPEVYVGE+GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKFCPEVYVGEEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G L D++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAGA+ +D+N +SST NS
Sbjct: 121 GDLKDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCSQAGANPDDKNLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEPLS +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPLSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVF  ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+G+DYYG +PAV+
Sbjct: 241 HKARLCGVFTYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGKDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALCTQAG IAP KYHC MKVQGL P
Sbjct: 301 ALCTQAGVIAPFKYHCMMKVQGLSP 324

[Close]
BLAST of CmoCh20G006130 vs. NCBI nr
Match: gi|659111656|ref|XP_008455841.1| (PREDICTED: APO protein 4, mitochondrial [Cucumis melo])

HSP 1 Score: 542.0 bits (1395), Expect = 8.9e-151
Identity = 256/325 (78.77%), Postives = 288/325 (88.62%), Query Frame = 1 

Query: 64  MKTMPFMALRRKFCENIVQEFVLHRCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVA 123
           MKTM FMA+RRKF +N+VQEF+L RCYSSKV+LKKLRPM+LKRIQ+RA + PIKG+ PVA
Sbjct: 1   MKTMAFMAIRRKFRDNVVQEFMLQRCYSSKVNLKKLRPMILKRIQDRAKSYPIKGMTPVA 60

Query: 124 QQVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTR 183
           QQV EARAMLIHGVSTLLK+FPV+SCK+CPEVYVG +GHLIRSCGGYKRG KNQVH+W R
Sbjct: 61  QQVLEARAMLIHGVSTLLKSFPVLSCKYCPEVYVGAEGHLIRSCGGYKRGAKNQVHQWIR 120

Query: 184 GGLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNS 243
           G LND++VPVEAFH HHMF+ V +HDER NFERVPAVVELC QAG + +D++ +SST NS
Sbjct: 121 GDLNDIIVPVEAFHLHHMFQDVIKHDERFNFERVPAVVELCCQAGVNPDDKDLASSTQNS 180

Query: 244 VGGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSV 303
             GGG SG DEP S +EM LLATET+RAWET+RTGVQKLLMVYPTK+CKYCS+VHVGPS 
Sbjct: 181 AEGGG-SGMDEPFSDHEMMLLATETIRAWETLRTGVQKLLMVYPTKVCKYCSEVHVGPSG 240

Query: 304 HQARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVL 363
           H+AR CGVFK ESWRGSHFWEKADVDDLVPPKIVWHRR QDPPVLVD+GRDYYG +PAV+
Sbjct: 241 HKARLCGVFKYESWRGSHFWEKADVDDLVPPKIVWHRRQQDPPVLVDKGRDYYGHAPAVV 300

Query: 364 ALCTQAGTIAPPKYHCRMKVQGLPP 389
           ALC QAG IAP KYHC MKVQGL P
Sbjct: 301 ALCMQAGAIAPFKYHCMMKVQGLSP 324

[Close]
BLAST of CmoCh20G006130 vs. NCBI nr
Match: gi|590652086|ref|XP_007033060.1| (APO protein 4 isoform 1 [Theobroma cacao])

HSP 1 Score: 438.0 bits (1125), Expect = 1.8e-119
Identity = 205/302 (67.88%), Postives = 245/302 (81.13%), Query Frame = 1 

Query: 88  RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQVFEARAMLIHGVSTLLKAFPVV 147
           R YSSKVDLKKLRPM+LKRI+NRA + P+ G+IPVAQ+V  ARA+L  GVS LLK FPV+
Sbjct: 10  RSYSSKVDLKKLRPMILKRIENRAKDYPVPGMIPVAQEVLMARALLFQGVSILLKLFPVL 69

Query: 148 SCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGGLNDVLVPVEAFHRHHMFEKVNE 207
           +CKFCPEVY+GEKGHLI++C GYKR  KN+VHEW  GGLND+LVPVEAFH H+MF+ V +
Sbjct: 70  ACKFCPEVYIGEKGHLIKTCCGYKRIGKNRVHEWVNGGLNDILVPVEAFHLHNMFQGVIK 129

Query: 208 HDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVGGGGGSGRDEPLSGNEMRLLATE 267
           H +R +FERVPAVVELCWQAGA  NDEN +S +  +    GG    E LS +++ ++A  
Sbjct: 130 HQQRFDFERVPAVVELCWQAGADLNDENLNSGSLVADEFYGGVRGIESLSHDDLTVIANG 189

Query: 268 TLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQARPCGVFKCESWRGSHFWEKAD 327
           TLRAWET+R+GV KLL+VYP K+CKYCS+VHVGPS H+AR CGVF+ ESWRG+HFW+KA 
Sbjct: 190 TLRAWETLRSGVMKLLLVYPAKVCKYCSEVHVGPSGHRARLCGVFRYESWRGAHFWKKAG 249

Query: 328 VDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLALCTQAGTIAPPKYHCRMKVQGLP 387
           VDDLVPPKIVW RRPQDP VL+DEGRDYYG +PAV+ LC+ AG I P KY C MKV GLP
Sbjct: 250 VDDLVPPKIVWRRRPQDPLVLLDEGRDYYGHAPAVVDLCSGAGAIVPTKYSCMMKVSGLP 309

Query: 388 PP 390
            P
Sbjct: 310 AP 311

[Close]
BLAST of CmoCh20G006130 vs. NCBI nr
Match: gi|359485666|ref|XP_002273999.2| (PREDICTED: APO protein 4, mitochondrial [Vitis vinifera])

HSP 1 Score: 434.1 bits (1115), Expect = 2.6e-118
Identity = 206/324 (63.58%), Postives = 254/324 (78.40%), Query Frame = 1 

Query: 70  MALRRKFCENIVQE---FVLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQQ 129
           MALR K     + E   F ++ R YS KVDLKKLRPM+LKRI+NRA   PI  +IPVAQ 
Sbjct: 1   MALRGKLWHCFLDEASGFAMYARFYSVKVDLKKLRPMILKRIENRAKEYPISSMIPVAQD 60

Query: 130 VFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRGG 189
           V +AR++LI GVSTL+  FPV++CKFCPEVY+GE+GHLI++C GYKR  KNQVHEW  G 
Sbjct: 61  VLKARSLLIQGVSTLMNVFPVMACKFCPEVYIGEQGHLIQTCYGYKRRSKNQVHEWISGS 120

Query: 190 LNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSVG 249
           LND+LVPVE FH   MF+ V +H +R +F+RVPAV ELC QAGA  ++EN SSS+W S  
Sbjct: 121 LNDILVPVETFHLQKMFQDVIKHHQRFDFDRVPAVFELCLQAGADLDEENLSSSSWKSES 180

Query: 250 GGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVHQ 309
              G    + LS +E++ +AT TLRAWE +R+G+++LL+VYP K+CKYCS+VHVGPS H+
Sbjct: 181 TFSGVHGTKSLSPDELKFVATGTLRAWEVLRSGIRRLLLVYPAKVCKYCSEVHVGPSGHK 240

Query: 310 ARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLAL 369
           AR CGVFK ESWRG+HFW+KADVDDLVPPKIVW +RPQDPPVLV+EGRD+YG +PAV+ L
Sbjct: 241 ARLCGVFKYESWRGAHFWKKADVDDLVPPKIVWRQRPQDPPVLVNEGRDFYGHAPAVVDL 300

Query: 370 CTQAGTIAPPKYHCRMKVQGLPPP 390
           CT+AG IAP +YH  MKVQGLP P
Sbjct: 301 CTKAGAIAPARYHSMMKVQGLPGP 324

[Close]
BLAST of CmoCh20G006130 vs. NCBI nr
Match: gi|743883363|ref|XP_011037010.1| (PREDICTED: APO protein 4, mitochondrial [Populus euphratica])

HSP 1 Score: 428.7 bits (1101), Expect = 1.1e-116
Identity = 202/327 (61.77%), Postives = 254/327 (77.68%), Query Frame = 1 

Query: 70  MALRRKFCENIVQEF----VLH-RCYSSKVDLKKLRPMVLKRIQNRANNCPIKGLIPVAQ 129
           MA  +K  EN+V+EF     +H R YSS+VD KKLRPM+LKRIQNRA + P+KG++PVA+
Sbjct: 1   MAFTKKLWENLVEEFSKTYFMHSRFYSSRVDFKKLRPMILKRIQNRAKDYPVKGMVPVAR 60

Query: 130 QVFEARAMLIHGVSTLLKAFPVVSCKFCPEVYVGEKGHLIRSCGGYKRGPKNQVHEWTRG 189
           +V E R +LI GVSTL++ FPV++CKFCPEVY+GEKGHLI++C GYKR  + +VHEW  G
Sbjct: 61  EVLEKRKLLIQGVSTLMEVFPVLACKFCPEVYIGEKGHLIQTCYGYKRCGRKRVHEWIPG 120

Query: 190 GLNDVLVPVEAFHRHHMFEKVNEHDERLNFERVPAVVELCWQAGASTNDENPSSSTWNSV 249
           GLND+LVPVE F  H+MF+ V EH++R +F+RVPAVVELC QAGA+ +DEN      +  
Sbjct: 121 GLNDILVPVETFRLHNMFQDVIEHNQRFDFDRVPAVVELCRQAGANIDDENLHPGMLDLD 180

Query: 250 GGGGGSGRDEPLSGNEMRLLATETLRAWETVRTGVQKLLMVYPTKICKYCSDVHVGPSVH 309
           GG G     EP S + +   A E L AWE +R+GVQ+LL+VYP+K+CK+CS+VH+GPS H
Sbjct: 181 GGIGHIDGGEPFSPSHLMHTAKEILDAWEKLRSGVQRLLLVYPSKVCKHCSEVHIGPSGH 240

Query: 310 QARPCGVFKCESWRGSHFWEKADVDDLVPPKIVWHRRPQDPPVLVDEGRDYYGQSPAVLA 369
           +AR CGVFK ESW G HFW+KA+VDDLVPPKIVW RRPQDPPVLV+EGRD+YG +PAV+ 
Sbjct: 241 KARLCGVFKFESWHGKHFWKKAEVDDLVPPKIVWWRRPQDPPVLVNEGRDFYGHAPAVVD 300

Query: 370 LCTQAGTIAPPKYHCRMKVQGLPPPQS 392
           LCT+ G I PPKY C MK+QGL  P S
Sbjct: 301 LCTKTGIIVPPKYSCMMKIQGLSAPVS 327

The following BLAST results are available for this feature:
BLAST of CmoCh20G006130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
APO4_ARATH6.9e-9553.16APO protein 4, mitochondrial OS=Arabidopsis thaliana GN=APO4 PE=2 SV=2[more]
APO2_ARATH1.4e-5537.91APO protein 2, chloroplastic OS=Arabidopsis thaliana GN=APO2 PE=2 SV=1[more]
APO1_ARATH9.8e-4934.66APO protein 1, chloroplastic OS=Arabidopsis thaliana GN=APO1 PE=2 SV=1[more]
APO3_ARATH2.3e-2135.29APO protein 3, mitochondrial OS=Arabidopsis thaliana GN=APO3 PE=2 SV=1[more]
BLAST of CmoCh20G006130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LQG5_CUCSA6.6e-15380.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G421010 PE=4 SV=1[more]
A0A061EHU0_THECC1.3e-11967.88APO protein 4 isoform 1 OS=Theobroma cacao GN=TCM_019219 PE=4 SV=1[more]
F6HIK2_VITVI1.8e-11863.58Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02380 PE=4 SV=... [more]
A0A151R7A7_CAJCA1.3e-11662.58Uncharacterized protein OS=Cajanus cajan GN=KK1_040522 PE=4 SV=1[more]
U5FMZ8_POPTR1.7e-11662.08Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s06490g PE=4 SV=1[more]
BLAST of CmoCh20G006130 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G21740.13.9e-9653.16 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT5G57930.27.9e-5737.91 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT1G64810.25.5e-5034.66 Arabidopsis thaliana protein of unknown function (DUF794)[more]
AT5G61930.11.3e-2235.29 Arabidopsis thaliana protein of unknown function (DUF794)[more]
BLAST of CmoCh20G006130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449468339|ref|XP_004151879.1|9.5e-15380.00PREDICTED: APO protein 4, mitochondrial [Cucumis sativus][more]
gi|659111656|ref|XP_008455841.1|8.9e-15178.77PREDICTED: APO protein 4, mitochondrial [Cucumis melo][more]
gi|590652086|ref|XP_007033060.1|1.8e-11967.88APO protein 4 isoform 1 [Theobroma cacao][more]
gi|359485666|ref|XP_002273999.2|2.6e-11863.58PREDICTED: APO protein 4, mitochondrial [Vitis vinifera][more]
gi|743883363|ref|XP_011037010.1|1.1e-11661.77PREDICTED: APO protein 4, mitochondrial [Populus euphratica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023342APO_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh20G006130.1CmoCh20G006130.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023342APO domainPFAMPF05634APO_RNA-bindcoord: 92..231
score: 8.1E-39coord: 264..382
score: 8.2
IPR023342APO domainPROFILEPS51499APOcoord: 148..233
score: 19.947coord: 290..375
score: 19
NoneNo IPR availablePANTHERPTHR10388EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1coord: 41..366
score: 2.8E
NoneNo IPR availablePANTHERPTHR10388:SF20APO PROTEIN 4, MITOCHONDRIALcoord: 41..366
score: 2.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh20G006130Cucsa.072830Cucumber (Gy14) v1cgycmoB0110
CmoCh20G006130CmaCh20G006310Cucurbita maxima (Rimu)cmacmoB552
CmoCh20G006130CmaCh02G001560Cucurbita maxima (Rimu)cmacmoB608
CmoCh20G006130Cla010496Watermelon (97103) v1cmowmB525
CmoCh20G006130Csa2G421010Cucumber (Chinese Long) v2cmocuB534
CmoCh20G006130MELO3C019241Melon (DHL92) v3.5.1cmomeB482
CmoCh20G006130ClCG02G008480Watermelon (Charleston Gray)cmowcgB482
CmoCh20G006130CSPI02G26640Wild cucumber (PI 183967)cmocpiB539
CmoCh20G006130Lsi10G001480Bottle gourd (USVL1VR-Ls)cmolsiB493
CmoCh20G006130Cp4.1LG16g04430Cucurbita pepo (Zucchini)cmocpeB517
CmoCh20G006130Cp4.1LG05g14410Cucurbita pepo (Zucchini)cmocpeB536
CmoCh20G006130MELO3C019241.2Melon (DHL92) v3.6.1cmomedB558
CmoCh20G006130CsaV3_2G035140Cucumber (Chinese Long) v3cmocucB0640
CmoCh20G006130Cla97C02G035080Watermelon (97103) v2cmowmbB548
CmoCh20G006130Bhi10G001136Wax gourdcmowgoB0688
CmoCh20G006130CsGy2G026110Cucumber (Gy14) v2cgybcmoB212
CmoCh20G006130Carg03143Silver-seed gourdcarcmoB0464
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh20G006130CmoCh02G001610Cucurbita moschata (Rifu)cmocmoB406
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh20G006130Cucumber (Gy14) v2cgybcmoB937
CmoCh20G006130Melon (DHL92) v3.6.1cmomedB575
CmoCh20G006130Melon (DHL92) v3.6.1cmomedB577
CmoCh20G006130Silver-seed gourdcarcmoB0043
CmoCh20G006130Silver-seed gourdcarcmoB1184
CmoCh20G006130Cucumber (Chinese Long) v3cmocucB0672
CmoCh20G006130Watermelon (97103) v2cmowmbB552
CmoCh20G006130Wax gourdcmowgoB0675
CmoCh20G006130Cucurbita moschata (Rifu)cmocmoB117
CmoCh20G006130Cucurbita moschata (Rifu)cmocmoB381
CmoCh20G006130Cucumber (Gy14) v1cgycmoB0408
CmoCh20G006130Cucurbita maxima (Rimu)cmacmoB517
CmoCh20G006130Wild cucumber (PI 183967)cmocpiB568
CmoCh20G006130Cucumber (Chinese Long) v2cmocuB562
CmoCh20G006130Melon (DHL92) v3.5.1cmomeB504
CmoCh20G006130Watermelon (Charleston Gray)cmowcgB484
CmoCh20G006130Watermelon (97103) v1cmowmB526
CmoCh20G006130Cucurbita pepo (Zucchini)cmocpeB515
CmoCh20G006130Cucurbita pepo (Zucchini)cmocpeB525
CmoCh20G006130Bottle gourd (USVL1VR-Ls)cmolsiB499