CmoCh13G008920.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACAAACCAGTGGTTGAAGACGAGGATGGTCATCTCGAAATCCTCAAGGCGGTGGCGCAGGCATGGCAAAGTCACACCGGTACTTCAAAGCCTGCAAGTGAATTCGACGCCCATCGCCGCAATTGCAGAGCCAATCCATCTCGGTTCAAGCTTGAGGCGATACGAAGCCGGTCTTCCGTCGGTGGCATGAGGAGATGGGACTTCGGACAGTCGCTGTGGGATTCGTATGAGATTGTGGCGGTTTCGAAGAAGCTGGAGACGGGGTTGGTGCTCGACGGCGACGGGTTTCGAGAGGCCGATGGCGGTGGGCGGAATCAGAGGAAACAGCGAGAGAGTTGTAATAGTTTGAGAAATTTGTTCAATAGAACTTCGAGGAGATTCAATTAG ATGAAGAACAAACCAGTGGTTGAAGACGAGGATGGTCATCTCGAAATCCTCAAGGCGGTGGCGCAGGCATGGCAAAGTCACACCGGTACTTCAAAGCCTGCAAGTGAATTCGACGCCCATCGCCGCAATTGCAGAGCCAATCCATCTCGGTTCAAGCTTGAGGCGATACGAAGCCGGTCTTCCGTCGGTGGCATGAGGAGATGGGACTTCGGACAGTCGCTGTGGGATTCGTATGAGATTGTGGCGGTTTCGAAGAAGCTGGAGACGGGGTTGGTGCTCGACGGCGACGGGTTTCGAGAGGCCGATGGCGGTGGGCGGAATCAGAGGAAACAGCGAGAGAGTTGTAATAGTTTGAGAAATTTGTTCAATAGAACTTCGAGGAGATTCAATTAG ATGAAGAACAAACCAGTGGTTGAAGACGAGGATGGTCATCTCGAAATCCTCAAGGCGGTGGCGCAGGCATGGCAAAGTCACACCGGTACTTCAAAGCCTGCAAGTGAATTCGACGCCCATCGCCGCAATTGCAGAGCCAATCCATCTCGGTTCAAGCTTGAGGCGATACGAAGCCGGTCTTCCGTCGGTGGCATGAGGAGATGGGACTTCGGACAGTCGCTGTGGGATTCGTATGAGATTGTGGCGGTTTCGAAGAAGCTGGAGACGGGGTTGGTGCTCGACGGCGACGGGTTTCGAGAGGCCGATGGCGGTGGGCGGAATCAGAGGAAACAGCGAGAGAGTTGTAATAGTTTGAGAAATTTGTTCAATAGAACTTCGAGGAGATTCAATTAG
BLAST of CmoCh13G008920.1 vs. TrEMBL
Match: A0A0A0LTM3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046880 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 5.0e-49 Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. TrEMBL
Match: A0A151TT50_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_009428 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 4.7e-31 Identity = 79/132 (59.85%), Postives = 93/132 (70.45%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. TrEMBL
Match: M5WLX8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024800mg PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 1.5e-29 Identity = 81/136 (59.56%), Postives = 97/136 (71.32%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. TrEMBL
Match: V4TNE3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022689mg PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 3.4e-29 Identity = 80/138 (57.97%), Postives = 95/138 (68.84%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. TrEMBL
Match: B9RAU1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1508640 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 1.7e-28 Identity = 75/131 (57.25%), Postives = 94/131 (71.76%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. TAIR10
Match: AT4G24700.1 (AT4G24700.1 unknown protein) HSP 1 Score: 97.4 bits (241), Expect = 6.7e-21 Identity = 59/133 (44.36%), Postives = 84/133 (63.16%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. NCBI nr
Match: gi|778657893|ref|XP_011651756.1| (PREDICTED: uncharacterized protein LOC105434938 [Cucumis sativus]) HSP 1 Score: 201.8 bits (512), Expect = 7.2e-49 Identity = 107/135 (79.26%), Postives = 115/135 (85.19%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. NCBI nr
Match: gi|659067325|ref|XP_008438871.1| (PREDICTED: uncharacterized protein LOC103483829 [Cucumis melo]) HSP 1 Score: 199.9 bits (507), Expect = 2.7e-48 Identity = 106/135 (78.52%), Postives = 114/135 (84.44%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. NCBI nr
Match: gi|694370157|ref|XP_009362938.1| (PREDICTED: uncharacterized protein LOC103952950 [Pyrus x bretschneideri]) HSP 1 Score: 143.7 bits (361), Expect = 2.3e-31 Identity = 82/136 (60.29%), Postives = 98/136 (72.06%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. NCBI nr
Match: gi|1012359033|gb|KYP70217.1| (hypothetical protein KK1_009428 [Cajanus cajan]) HSP 1 Score: 142.1 bits (357), Expect = 6.7e-31 Identity = 79/132 (59.85%), Postives = 93/132 (70.45%), Query Frame = 1
BLAST of CmoCh13G008920.1 vs. NCBI nr
Match: gi|1009175864|ref|XP_015869119.1| (PREDICTED: uncharacterized protein LOC107406504 [Ziziphus jujuba]) HSP 1 Score: 139.0 bits (349), Expect = 5.7e-30 Identity = 74/126 (58.73%), Postives = 93/126 (73.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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