CmoCh11G013830.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G013830.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ralf-like 4, putative
Location	Cmo_Chr11 : 9662327 .. 9662692 (+)
Sequence length	366

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

Homology

[Close]

BLAST of CmoCh11G013830.1 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830.1 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 50  SETNRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCS 108

Query: 112 AITGCARF 120
           AIT C R+
Sbjct: 110 AITHCYRY 108

[Close]

BLAST of CmoCh11G013830.1 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-11
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 31  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 90
           S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013830.1 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC 117
           A K+++SY AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmoCh11G013830.1 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013830.1 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60
           M + K+ L LLL+    APL  A  +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013830.1 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-19
Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVA-PLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTE--DSRRQLF 63
           MK+ L LLL+  A+A  L  A  + + +      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013830.1 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830.1 vs. TrEMBL
Match: A0A061GMB1_THECC (Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 5   KIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGF 64
           K++LV LL+  A+   S  FHEAS   +   ++   S   G       ED  + L     
Sbjct: 4   KVWLVFLLLALAMVAESTTFHEASWGLTHFGNDELSSCIDGQCD---VEDVSQTLMDSEI 63

Query: 65  VYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
              + A+KR++SY AL  N++PC RRG SYY+C+ R+R NPY RGC+AIT C R+T
Sbjct: 64  NRRQLAQKRYISYGALKANSVPCNRRGNSYYNCQNRKRANPYNRGCSAITHCYRYT 116

[Close]

BLAST of CmoCh11G013830.1 vs. TrEMBL
Match: D7LGD9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902453 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-13
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830.1 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830.1 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 50  SETNRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCS 108

Query: 112 AITGCARF 120
           AIT C R+
Sbjct: 110 AITHCYRY 108

[Close]

BLAST of CmoCh11G013830.1 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 31  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 90
           S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013830.1 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013830.1 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 1


Query: 37  NSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYD 96
           +S +S   G  +E + E+   + F         A+K+++SY A+ +N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh11G013830.1 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60
           M + K+ L LLL+    APL  A  +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013830.1 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 5.9e-21
Identity = 64/122 (52.46%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEA-SHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQL 60
           M +MK+ L LL++    APL  AF +  +H+ +       Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAA----PNYDFTTNN------EDSRRLL 60

Query: 61  FQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGF Y K  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 122
           TD
Sbjct: 121 TD 111

[Close]

BLAST of CmoCh11G013830.1 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-19
Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVA-PLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTE--DSRRQLF 63
           MK+ L LLL+  A+A  L  A  + + +      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013830.1 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYG 63
           +K+ L+ LL+  AV   + +FH+AS     L   S   F G D+   M  ++ R+    G
Sbjct: 3   VKLCLIFLLLALAVVAEASSFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAGG 62

Query: 64  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 122
                   ++++SY AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  --------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]

BLAST of CmoCh11G013830.1 vs. NCBI nr
Match: gi|565475268|ref|XP_006295275.1| (hypothetical protein CARUB_v10024364mg [Capsella rubella])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

The following BLAST results are available for this feature:

BLAST of CmoCh11G013830.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	3.7e-15	57.97	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	1.1e-14	57.35	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RLF23_ARATH	5.5e-11	42.86	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RALF_TOBAC	9.4e-11	59.57	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF33_ARATH	8.0e-10	53.06	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]

BLAST of CmoCh11G013830.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	3.1e-21	52.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	5.0e-19	51.24	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
R0HVQ3_9BRAS	8.3e-14	59.42	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
A0A061GMB1_THECC	1.4e-13	41.38	Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1	[more]
D7LGD9_ARALL	4.1e-13	57.97	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of CmoCh11G013830.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	2.1e-16	57.97	ralf-like 19	[more]
AT1G28270.1	6.0e-16	57.35	ralf-like 4	[more]
AT3G16570.1	3.1e-12	42.86	rapid alkalinization factor 23	[more]
AT4G15800.1	4.5e-11	53.06	ralf-like 33	[more]
AT3G05490.1	1.0e-10	37.80	ralf-like 22	[more]

BLAST of CmoCh11G013830.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	4.5e-21	52.89	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	5.9e-21	52.46	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	7.2e-19	51.24	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	1.1e-16	43.22	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]
gi\|565475268\|ref\|XP_006295275.1\|	1.2e-13	59.42	hypothetical protein CARUB_v10024364mg [Capsella rubella]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh11G013830	CmoCh11G013830	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013830.1	CmoCh11G013830.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013830.1.exon.1	CmoCh11G013830.1.exon.1	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh11G013830.1.CDS.1	CmoCh11G013830.1.CDS.1	CDS

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 53..118 score: 1.7
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 6..120 score: 3.0