CmoCh11G013830 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh11G013830
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ralf-like 4, putative
Location	Cmo_Chr11 : 9662327 .. 9662692 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

mRNA sequence

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

Coding sequence (CDS)

ATGGAAACAATGAAGATCTACCTCGTTCTCCTCCTCGTCTTTACCGCTGTTGCTCCGCTCTCCTTTGCCTTCCATGAAGCCTCCCACAGTTCATCCCTCCTCGACGATAATTCTCAATATAGCTTCTTTGGCGGAGACTCCTCCGAAGCCATGACTGAAGATAGTCGACGACAACTTTTCCAATATGGATTCGTCTATAATAAGGAAGCTCGCAAGAGGTTTTTGAGCTACTATGCACTTAGTAAGAATAATATCCCTTGCGGCCGTCGTGGTACCTCCTACTATGATTGCAAGAAGCGTAGAAGGATTAATCCTTATCGTCGCGGTTGCGCCGCCATCACTGGATGTGCTCGGTTCACCGATTAA

Homology

[Close]

BLAST of CmoCh11G013830 vs. Swiss-Prot
Match: RLF19_ARATH (Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.7e-15
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830 vs. Swiss-Prot
Match: RLF4_ARATH (Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.1e-14
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 50  SETNRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCS 108

Query: 112 AITGCARF 120
           AIT C R+
Sbjct: 110 AITHCYRY 108

[Close]

BLAST of CmoCh11G013830 vs. Swiss-Prot
Match: RLF23_ARATH (Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.5e-11
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 31  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 90
           S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013830 vs. Swiss-Prot
Match: RALF_TOBAC (Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 9.4e-11
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGC 117
           A K+++SY AL KN++PC RRG SYY+CK   + NPY RGC+AIT C
Sbjct: 67  ATKKYISYGALQKNSVPCSRRGASYYNCKPGAQANPYSRGCSAITRC 113

[Close]

BLAST of CmoCh11G013830 vs. Swiss-Prot
Match: RLF33_ARATH (Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013830 vs. TrEMBL
Match: A0A0A0KHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 3.1e-21
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60
           M + K+ L LLL+    APL  A  +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013830 vs. TrEMBL
Match: A0A0A0KCD7_CUCSA (F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-19
Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVA-PLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTE--DSRRQLF 63
           MK+ L LLL+  A+A  L  A  + + +      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013830 vs. TrEMBL
Match: R0HVQ3_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 8.3e-14
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830 vs. TrEMBL
Match: A0A061GMB1_THECC (Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.4e-13
Identity = 48/116 (41.38%), Postives = 67/116 (57.76%), Query Frame = 1


Query: 5   KIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYGF 64
           K++LV LL+  A+   S  FHEAS   +   ++   S   G       ED  + L     
Sbjct: 4   KVWLVFLLLALAMVAESTTFHEASWGLTHFGNDELSSCIDGQCD---VEDVSQTLMDSEI 63

Query: 65  VYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 121
              + A+KR++SY AL  N++PC RRG SYY+C+ R+R NPY RGC+AIT C R+T
Sbjct: 64  NRRQLAQKRYISYGALKANSVPCNRRGNSYYNCQNRKRANPYNRGCSAITHCYRYT 116

[Close]

BLAST of CmoCh11G013830 vs. TrEMBL
Match: D7LGD9_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_902453 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 4.1e-13
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830 vs. TAIR10
Match: AT2G33775.1 (AT2G33775.1 ralf-like 19)

HSP 1 Score: 82.4 bits (202), Expect = 2.1e-16
Identity = 40/69 (57.97%), Postives = 48/69 (69.57%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PC RRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SETNRRQL---------AARRSYISYGALRKNNVPCSRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

[Close]

BLAST of CmoCh11G013830 vs. TAIR10
Match: AT1G28270.1 (AT1G28270.1 ralf-like 4)

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-16
Identity = 39/68 (57.35%), Postives = 48/68 (70.59%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL +          +R++ Y AL KNN+PC RRG SYYDCKKRRR NPYRRGC+
Sbjct: 50  SETNRRQLAR---------GRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCS 108

Query: 112 AITGCARF 120
           AIT C R+
Sbjct: 110 AITHCYRY 108

[Close]

BLAST of CmoCh11G013830 vs. TAIR10
Match: AT3G16570.1 (AT3G16570.1 rapid alkalinization factor 23)

HSP 1 Score: 68.6 bits (166), Expect = 3.1e-12
Identity = 39/91 (42.86%), Postives = 51/91 (56.04%), Query Frame = 1


Query: 31  SSLLDDNSQYSFFGGDSSEAMTEDS---RRQLFQYGFVYNKEARKRFLSYYALSKNNIPC 90
           S+ L D     + GG+  E    DS   RR L          A +R++SY AL +N IPC
Sbjct: 57  SAALGDGGDLFYGGGEMGEEFEMDSEINRRIL----------ATRRYISYGALRRNTIPC 116

Query: 91  GRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
            RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 117 SRRGASYYNCRRGAQANPYSRGCSAITRCRR 137

[Close]

BLAST of CmoCh11G013830 vs. TAIR10
Match: AT4G15800.1 (AT4G15800.1 ralf-like 33)

HSP 1 Score: 64.7 bits (156), Expect = 4.5e-11
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 1


Query: 70  ARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCAR 119
           A  +++SY AL +N +PC RRG SYY+C++  + NPY RGC+AIT C R
Sbjct: 68  ATTKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCRR 116

[Close]

BLAST of CmoCh11G013830 vs. TAIR10
Match: AT3G05490.1 (AT3G05490.1 ralf-like 22)

HSP 1 Score: 63.5 bits (153), Expect = 1.0e-10
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 1


Query: 37  NSQYSFFGGDSSEAMTEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYD 96
           +S +S   G  +E + E+   + F         A+K+++SY A+ +N++PC RRG SYY+
Sbjct: 39  SSLFSGCTGSIAECIAEEEEME-FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYN 98

Query: 97  CKKRRRINPYRRGCAAITGCAR 119
           C++  + NPY RGC+ IT C R
Sbjct: 99  CQRGAQANPYSRGCSTITRCRR 119

[Close]

BLAST of CmoCh11G013830 vs. NCBI nr
Match: gi|449461879|ref|XP_004148669.1| (PREDICTED: protein RALF-like 19 [Cucumis sativus])

HSP 1 Score: 109.4 bits (272), Expect = 4.5e-21
Identity = 64/121 (52.89%), Postives = 74/121 (61.16%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLF 60
           M + K+ L LLL+    APL  A  +    S    D   Y F   +      EDSRR LF
Sbjct: 1   MRSTKLCLFLLLIAVVAAPLCLALSDDWTRSYA--DVPDYDFTNSN------EDSRRLLF 60

Query: 61  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 120
           QYGF Y K  + ++L Y AL KNNIPC  RG SYYDCKKR++ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNIPCRHRGRSYYDCKKRKKANPYRRGCIAITGCARFT 112

Query: 121 D 122
           D
Sbjct: 121 D 112

[Close]

BLAST of CmoCh11G013830 vs. NCBI nr
Match: gi|659080853|ref|XP_008441015.1| (PREDICTED: protein RALF-like 19 [Cucumis melo])

HSP 1 Score: 109.0 bits (271), Expect = 5.9e-21
Identity = 64/122 (52.46%), Postives = 77/122 (63.11%), Query Frame = 1


Query: 1   METMKIYLVLLLVFTAVAPLSFAFHEA-SHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQL 60
           M +MK+ L LL++    APL  AF +  +H+ +       Y F   +      EDSRR L
Sbjct: 1   MRSMKLGLFLLVIAVVAAPLCLAFSDDWTHAYAA----PNYDFTTNN------EDSRRLL 60

Query: 61  FQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARF 120
           FQYGF Y K  + ++L Y AL KNN PC  RG SYYDCKKRR+ NPYRRGC AITGCARF
Sbjct: 61  FQYGFAY-KYPKNKYLGYDALRKNNSPCRHRGRSYYDCKKRRKANPYRRGCIAITGCARF 111

Query: 121 TD 122
           TD
Sbjct: 121 TD 111

[Close]

BLAST of CmoCh11G013830 vs. NCBI nr
Match: gi|449466199|ref|XP_004150814.1| (PREDICTED: protein RALF-like 4 [Cucumis sativus])

HSP 1 Score: 102.1 bits (253), Expect = 7.2e-19
Identity = 62/121 (51.24%), Postives = 76/121 (62.81%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVA-PLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTE--DSRRQLF 63
           MK+ L LLL+  A+A  L  A  + + +      N  Y+F+G      + +  DSRR LF
Sbjct: 1   MKLGLCLLLLVAAIAITLPVALCDWTRAYG----NPDYAFWGTAEPATINDVDDSRRLLF 60

Query: 64  QYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFT 122
           QYGF Y K  + ++L Y AL KNN PC  RG SYYDC KRR+ NPYRRGC AITGCARFT
Sbjct: 61  QYGFAY-KYPKNKYLGYDALRKNNSPCRHRGHSYYDCTKRRKANPYRRGCIAITGCARFT 116

[Close]

BLAST of CmoCh11G013830 vs. NCBI nr
Match: gi|1009109354|ref|XP_015889777.1| (PREDICTED: protein RALF-like 19 [Ziziphus jujuba])

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-16
Identity = 51/118 (43.22%), Postives = 71/118 (60.17%), Query Frame = 1


Query: 4   MKIYLVLLLVFTAVAPLSFAFHEASHSSSLLDDNSQYSFFGGDSSEAMTEDSRRQLFQYG 63
           +K+ L+ LL+  AV   + +FH+AS     L   S   F G D+   M  ++ R+    G
Sbjct: 3   VKLCLIFLLLALAVVAEASSFHDASWGLDHLSHGSVGDFIGEDNEMLMDSEASRRALAGG 62

Query: 64  FVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCAAITGCARFTD 122
                   ++++SY AL KN +PCGRRG SYY+C+KR+R NPY+RGC  IT CARFTD
Sbjct: 63  --------RKYISYSALKKNRVPCGRRGQSYYNCQKRQRANPYKRGCTVITHCARFTD 112

[Close]

BLAST of CmoCh11G013830 vs. NCBI nr
Match: gi|565475268|ref|XP_006295275.1| (hypothetical protein CARUB_v10024364mg [Capsella rubella])

HSP 1 Score: 84.7 bits (208), Expect = 1.2e-13
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 1


Query: 52  TEDSRRQLFQYGFVYNKEARKRFLSYYALSKNNIPCGRRGTSYYDCKKRRRINPYRRGCA 111
           +E +RRQL          AR+ ++SY AL KNN+PCGRRG SYYDCKKR+R NPYRRGC+
Sbjct: 50  SEANRRQL---------AARRSYISYGALKKNNVPCGRRGRSYYDCKKRKRANPYRRGCS 109

Query: 112 AITGCARFT 121
            IT C R T
Sbjct: 110 VITHCYRQT 109

The following BLAST results are available for this feature:

BLAST of CmoCh11G013830 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RLF19_ARATH	3.7e-15	57.97	Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1	[more]
RLF4_ARATH	1.1e-14	57.35	Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1	[more]
RLF23_ARATH	5.5e-11	42.86	Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23 PE=1 SV=1	[more]
RALF_TOBAC	9.4e-11	59.57	Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1	[more]
RLF33_ARATH	8.0e-10	53.06	Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1	[more]

BLAST of CmoCh11G013830 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHU4_CUCSA	3.1e-21	52.89	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G484570 PE=4 SV=1	[more]
A0A0A0KCD7_CUCSA	5.0e-19	51.24	F3H9.8 protein OS=Cucumis sativus GN=Csa_6G199790 PE=4 SV=1	[more]
R0HVQ3_9BRAS	8.3e-14	59.42	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10024364mg PE=4 SV=1	[more]
A0A061GMB1_THECC	1.4e-13	41.38	Ralf-like 4, putative OS=Theobroma cacao GN=TCM_029845 PE=4 SV=1	[more]
D7LGD9_ARALL	4.1e-13	57.97	Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA...	[more]

BLAST of CmoCh11G013830 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33775.1	2.1e-16	57.97	ralf-like 19	[more]
AT1G28270.1	6.0e-16	57.35	ralf-like 4	[more]
AT3G16570.1	3.1e-12	42.86	rapid alkalinization factor 23	[more]
AT4G15800.1	4.5e-11	53.06	ralf-like 33	[more]
AT3G05490.1	1.0e-10	37.80	ralf-like 22	[more]

BLAST of CmoCh11G013830 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449461879\|ref\|XP_004148669.1\|	4.5e-21	52.89	PREDICTED: protein RALF-like 19 [Cucumis sativus]	[more]
gi\|659080853\|ref\|XP_008441015.1\|	5.9e-21	52.46	PREDICTED: protein RALF-like 19 [Cucumis melo]	[more]
gi\|449466199\|ref\|XP_004150814.1\|	7.2e-19	51.24	PREDICTED: protein RALF-like 4 [Cucumis sativus]	[more]
gi\|1009109354\|ref\|XP_015889777.1\|	1.1e-16	43.22	PREDICTED: protein RALF-like 19 [Ziziphus jujuba]	[more]
gi\|565475268\|ref\|XP_006295275.1\|	1.2e-13	59.42	hypothetical protein CARUB_v10024364mg [Capsella rubella]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008801	RALF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh11G013830.1	CmoCh11G013830.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 53..118 score: 1.7
None	No IPR available	PANTHER	PTHR33136	FAMILY NOT NAMED	coord: 6..120 score: 3.0

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh11G013830	Cucumber (Gy14) v2	cgybcmoB156
CmoCh11G013830	Cucumber (Gy14) v2	cgybcmoB270
CmoCh11G013830	Cucumber (Gy14) v2	cgybcmoB881
CmoCh11G013830	Melon (DHL92) v3.6.1	cmomedB091
CmoCh11G013830	Melon (DHL92) v3.6.1	cmomedB123
CmoCh11G013830	Melon (DHL92) v3.6.1	cmomedB139
CmoCh11G013830	Melon (DHL92) v3.6.1	cmomedB143
CmoCh11G013830	Melon (DHL92) v3.6.1	cmomedB146
CmoCh11G013830	Silver-seed gourd	carcmoB0018
CmoCh11G013830	Silver-seed gourd	carcmoB0256
CmoCh11G013830	Silver-seed gourd	carcmoB0401
CmoCh11G013830	Silver-seed gourd	carcmoB0508
CmoCh11G013830	Cucumber (Chinese Long) v3	cmocucB0121
CmoCh11G013830	Cucumber (Chinese Long) v3	cmocucB0133
CmoCh11G013830	Cucumber (Chinese Long) v3	cmocucB0136
CmoCh11G013830	Cucumber (Chinese Long) v3	cmocucB0146
CmoCh11G013830	Cucumber (Chinese Long) v3	cmocucB0160
CmoCh11G013830	Watermelon (97103) v2	cmowmbB078
CmoCh11G013830	Watermelon (97103) v2	cmowmbB088
CmoCh11G013830	Watermelon (97103) v2	cmowmbB111
CmoCh11G013830	Watermelon (97103) v2	cmowmbB128
CmoCh11G013830	Wax gourd	cmowgoB0104
CmoCh11G013830	Wax gourd	cmowgoB0110
CmoCh11G013830	Wax gourd	cmowgoB0124
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB131
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB096
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB105
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB110
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB125
CmoCh11G013830	Cucurbita moschata (Rifu)	cmocmoB129
CmoCh11G013830	Cucumber (Gy14) v1	cgycmoB0624
CmoCh11G013830	Cucumber (Gy14) v1	cgycmoB0684
CmoCh11G013830	Cucumber (Gy14) v1	cgycmoB1084
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB117
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB318
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB494
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB678
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB761
CmoCh11G013830	Cucurbita maxima (Rimu)	cmacmoB842
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB093
CmoCh11G013830	Wild cucumber (PI 183967)	cmocpiB120
CmoCh11G013830	Wild cucumber (PI 183967)	cmocpiB136
CmoCh11G013830	Cucumber (Chinese Long) v2	cmocuB107
CmoCh11G013830	Cucumber (Chinese Long) v2	cmocuB117
CmoCh11G013830	Cucumber (Chinese Long) v2	cmocuB137
CmoCh11G013830	Melon (DHL92) v3.5.1	cmomeB085
CmoCh11G013830	Melon (DHL92) v3.5.1	cmomeB114
CmoCh11G013830	Melon (DHL92) v3.5.1	cmomeB128
CmoCh11G013830	Melon (DHL92) v3.5.1	cmomeB133
CmoCh11G013830	Watermelon (Charleston Gray)	cmowcgB088
CmoCh11G013830	Watermelon (Charleston Gray)	cmowcgB086
CmoCh11G013830	Watermelon (Charleston Gray)	cmowcgB109
CmoCh11G013830	Watermelon (Charleston Gray)	cmowcgB123
CmoCh11G013830	Watermelon (97103) v1	cmowmB081
CmoCh11G013830	Watermelon (97103) v1	cmowmB098
CmoCh11G013830	Watermelon (97103) v1	cmowmB106
CmoCh11G013830	Watermelon (97103) v1	cmowmB109
CmoCh11G013830	Cucurbita pepo (Zucchini)	cmocpeB087
CmoCh11G013830	Cucurbita pepo (Zucchini)	cmocpeB092
CmoCh11G013830	Cucurbita pepo (Zucchini)	cmocpeB095
CmoCh11G013830	Cucurbita pepo (Zucchini)	cmocpeB114
CmoCh11G013830	Cucurbita pepo (Zucchini)	cmocpeB126
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB103
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB108
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB113
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB116
CmoCh11G013830	Bottle gourd (USVL1VR-Ls)	cmolsiB140