CmoCh09G011800.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG
BLAST of CmoCh09G011800.1 vs. TrEMBL
Match: A0A0A0KWX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006290 PE=4 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35 Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TrEMBL
Match: A0A0D2U702_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G057600 PE=4 SV=1) HSP 1 Score: 135.2 bits (339), Expect = 7.2e-29 Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TrEMBL
Match: A0A059AJL4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03089 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28 Identity = 88/163 (53.99%), Postives = 108/163 (66.26%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TrEMBL
Match: A0A0D2RS30_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013700 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 2.8e-28 Identity = 81/140 (57.86%), Postives = 93/140 (66.43%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TrEMBL
Match: Q8H6R2_PONTR (CTV.15 OS=Poncirus trifoliata GN=CTV.15 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.1e-28 Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related) HSP 1 Score: 120.6 bits (301), Expect = 9.3e-28 Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related) HSP 1 Score: 115.2 bits (287), Expect = 3.9e-26 Identity = 68/137 (49.64%), Postives = 93/137 (67.88%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related) HSP 1 Score: 58.5 bits (140), Expect = 4.4e-09 Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. NCBI nr
Match: gi|659108435|ref|XP_008454197.1| (PREDICTED: putative protein TPRXL [Cucumis melo]) HSP 1 Score: 172.2 bits (435), Expect = 7.7e-40 Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. NCBI nr
Match: gi|449469250|ref|XP_004152334.1| (PREDICTED: uncharacterized protein LOC101207294 [Cucumis sativus]) HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35 Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. NCBI nr
Match: gi|823237870|ref|XP_012451582.1| (PREDICTED: uncharacterized protein LOC105773923 [Gossypium raimondii]) HSP 1 Score: 135.2 bits (339), Expect = 1.0e-28 Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. NCBI nr
Match: gi|702484467|ref|XP_010033986.1| (PREDICTED: uncharacterized protein LOC104423200 [Eucalyptus grandis]) HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28 Identity = 88/163 (53.99%), Postives = 108/163 (66.26%), Query Frame = 1
BLAST of CmoCh09G011800.1 vs. NCBI nr
Match: gi|823226238|ref|XP_012445937.1| (PREDICTED: uncharacterized protein LOC105769688 [Gossypium raimondii]) HSP 1 Score: 133.3 bits (334), Expect = 3.9e-28 Identity = 81/140 (57.86%), Postives = 93/140 (66.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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