CmoCh09G011800 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G011800
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionSerine-rich protein-related, putative
LocationCmo_Chr09 : 8352988 .. 8353482 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG

mRNA sequence

ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG

Coding sequence (CDS)

ATGGCTTCCTTCCTCGGCTCCAACTCTCCACAAGTTTCATCTCTGTCGTCGTTGGAGATCAAATTTGTCGGAATCTGCGGAAAATATCAGATTGATCCAAGGCCGGCATCTCCCGGCCGTTCGATTTCGGTTCAGAAGAATCGCGACGGAAATGCGAATGCGAATGAGAATGTGGTATCGTCGAATAAGAGGAAATGGTGGATGTGTTCTCCGTCTACTCATCCAGCCTCTTTCCGGTGTTCACTCCACAACAAGAAGTCGAGGCACTCTGTTAATGCCCTGAATCGCAGCGAGTTCTCGAACGGATCGTTGGATTTTCGTAGATCGGCAATGACGAATTCGATTGCCAGAATCGGAGGCGTGGAAGGTGCTGATCTCGTGAAGAGAGCTTTATTGGCTTTGATTAGGCCTTCTTCGCATCAGCTGCGGCCGCGATCAGCGTTTCAACCTAGGCCTAGCCGTCTATCAGTCATGTCAAAAGCAGAGCAGGAGTAG
Homology
[Close]
BLAST of CmoCh09G011800 vs. TrEMBL
Match: A0A0A0KWX3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006290 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-35
Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 1 

Query: 28  KYQIDPRPASPGR-SISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKK 87
           ++Q D R ASP R S+SVQKNRD NANA   V S+ K+   MCSP+ HP SFRCSLH K 
Sbjct: 54  RFQTDQRSASPSRRSVSVQKNRDSNANA---VPSNKKKVMCMCSPTKHPGSFRCSLH-KN 113

Query: 88  SRHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRS 147
           S HS++  N S+F N SL+ RRSAMTNS+ RI  VEGADLVKRAL ALIRPSSHQ R +S
Sbjct: 114 STHSIDISNGSQFRNVSLNIRRSAMTNSLVRIECVEGADLVKRALSALIRPSSHQQRRQS 173

Query: 148 AFQPRPSRLSVMSKAEQE 165
           AFQ RPS LSVMSKAE+E
Sbjct: 174 AFQRRPSHLSVMSKAEEE 187

[Close]
BLAST of CmoCh09G011800 vs. TrEMBL
Match: A0A0D2U702_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G057600 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.2e-29
Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSIS-VQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKK 87
           ++ +D RP SP RSI+ ++KN D    A +N+    +++  MCSP+THP SFRCSLH  K
Sbjct: 76  RFSLDNRPISPNRSIATIRKNTD----AVQNLEKRQQKRTCMCSPTTHPGSFRCSLH--K 135

Query: 88  SRHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRS 147
             ++ NA++    SN  L+ RRSAMTNS+ RIGGVEG DLVKRAL ALIRPSSHQ R RS
Sbjct: 136 GFNNSNAVSSYAPSN-RLNARRSAMTNSLVRIGGVEG-DLVKRALSALIRPSSHQQRRRS 195

Query: 148 AFQPRPSRLSVMSKAE 163
           AFQPRPSRLSVMSKAE
Sbjct: 196 AFQPRPSRLSVMSKAE 203

[Close]
BLAST of CmoCh09G011800 vs. TrEMBL
Match: A0A059AJL4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03089 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28
Identity = 88/163 (53.99%), Postives = 108/163 (66.26%), Query Frame = 1 

Query: 6   GSNSPQV-----SSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANANENVVS 65
           G++ P+V     SS SS  ++F        ID RP SPGRSISV+    G         +
Sbjct: 50  GASPPRVRMSGHSSQSSSSVRF-------SID-RPTSPGRSISVRNQIGGGGGGGGRATT 109

Query: 66  -SNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMTNSIARIG 125
             N++K  MCSP++HP SFRC+LH K SR +    + +  S+ SL+FRRSAMTNS+ RIG
Sbjct: 110 VPNQKKTCMCSPTSHPGSFRCALH-KNSRSNPQHHSGTYNSSRSLNFRRSAMTNSLVRIG 169

Query: 126 GVEGADLVKRALLALIRPSSHQLRPRSAFQPRPSRLSVMSKAE 163
           GVEG DLVKRAL ALIRPSSHQLR R+ F+PRPSRLS MS AE
Sbjct: 170 GVEG-DLVKRALAALIRPSSHQLRRRADFKPRPSRLSTMSSAE 202

[Close]
BLAST of CmoCh09G011800 vs. TrEMBL
Match: A0A0D2RS30_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013700 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-28
Identity = 81/140 (57.86%), Postives = 93/140 (66.43%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKS 87
           ++ +D RP SP RSIS  +    N  A  N+ S   ++  MCSP+THP SFRCSLH    
Sbjct: 77  RFSLDSRPISPNRSISAVRR---NTEALRNLQSKQPKRTCMCSPTTHPGSFRCSLHK--- 136

Query: 88  RHSVNALNRSEFSNG-----SLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQL 147
                  N S  S+G      L+ RRSAMTNS+ RIGGVEG DLVKRAL ALIRPSSHQ 
Sbjct: 137 -----GFNNSHASSGYAPSNRLNARRSAMTNSLVRIGGVEG-DLVKRALSALIRPSSHQQ 196

Query: 148 RPRSAFQPRPSRLSVMSKAE 163
           R R+AFQPRPSRLSVMSKAE
Sbjct: 197 RRRAAFQPRPSRLSVMSKAE 204

[Close]
BLAST of CmoCh09G011800 vs. TrEMBL
Match: Q8H6R2_PONTR (CTV.15 OS=Poncirus trifoliata GN=CTV.15 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.1e-28
Identity = 75/137 (54.74%), Postives = 99/137 (72.26%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSISVQKNRDGNANANENVVSSNK-RKWWMCSPSTHPASFRCSLHNKK 87
           ++ ID RP SPGRSIS  +      + + N  S N  ++   CSP+THP SFRC+LH + 
Sbjct: 73  RFSIDNRPISPGRSISYTRQ----ISKSNNAASFNAPKRTCACSPTTHPGSFRCALHKRT 132

Query: 88  SRHSVN-ALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPR 147
           + +S +   + S +S+  L++RRSAMTNS+ RIGGVEG +LVKRAL ALIRPSSHQ R R
Sbjct: 133 NSYSSHKTASSSHYSSSRLNYRRSAMTNSLVRIGGVEG-ELVKRALTALIRPSSHQQRRR 192

Query: 148 SAFQPRPSRLSVMSKAE 163
           +AF+PRPSRLS+MSKA+
Sbjct: 193 AAFEPRPSRLSIMSKAD 204

[Close]
BLAST of CmoCh09G011800 vs. TAIR10
Match: AT5G25280.1 (AT5G25280.1 serine-rich protein-related)

HSP 1 Score: 120.6 bits (301), Expect = 9.3e-28
Identity = 71/135 (52.59%), Postives = 92/135 (68.15%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKS 87
           +Y ID R  SP RSI+V  N+  N   +  +  S +R   MCSP+THP SFRCSLH  K+
Sbjct: 92  RYSIDNRSISPNRSIAVSSNKPSN---HHKIPDSRRR--CMCSPTTHPGSFRCSLH--KN 151

Query: 88  RHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRSA 147
             + +    + ++   L+ RRSAMTNS+ RIGGVEG + V+RAL  LIRPSSHQL+ RSA
Sbjct: 152 VANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEG-EWVRRALTTLIRPSSHQLKRRSA 211

Query: 148 FQPRPSRLSVMSKAE 163
           ++PR SRL+ MSKAE
Sbjct: 212 YEPRRSRLASMSKAE 218

[Close]
BLAST of CmoCh09G011800 vs. TAIR10
Match: AT5G11090.1 (AT5G11090.1 serine-rich protein-related)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-26
Identity = 68/137 (49.64%), Postives = 93/137 (67.88%), Query Frame = 1 

Query: 28  KYQIDPRPASP-GRSISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKK 87
           +Y +D R  SP  +SISV KN+  + N   +       +  MCSP+THP SFRCSLH  K
Sbjct: 90  RYSLDSRSISPTNKSISVSKNQPPSHNHKIS-------RRCMCSPTTHPGSFRCSLH--K 149

Query: 88  SRHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRS 147
           +  + +    + ++   L+ RRSAMTNS+ RIGGVEG + V+RAL  LIRPSSH L+ R+
Sbjct: 150 NVANPHGQGTASYTTNGLNMRRSAMTNSLVRIGGVEG-EWVRRALTTLIRPSSHHLKRRA 209

Query: 148 AFQPRPSRLSVMSKAEQ 164
           A+QPRPSRLS+M+KA++
Sbjct: 210 AYQPRPSRLSIMAKADE 216

[Close]
BLAST of CmoCh09G011800 vs. TAIR10
Match: AT5G20370.1 (AT5G20370.1 serine-rich protein-related)

HSP 1 Score: 58.5 bits (140), Expect = 4.4e-09
Identity = 49/111 (44.14%), Postives = 67/111 (60.36%), Query Frame = 1 

Query: 59  VSSN---KRKWWMCSPSTHPASFRCSLH----NKKSR----HSVNALNRSEFS---NGSL 118
           VSSN   KRK  +CSP+THP SFRCS H    ++KS+     +V   NR + +   N  L
Sbjct: 61  VSSNHQTKRKC-LCSPTTHPGSFRCSFHRRLEHEKSKTLASSTVKRNNRGDNTIRVNVGL 120

Query: 119 DFRRSAMTNSIARIGGVEGADLVKRALLA-LIRPSSHQLRPRSAFQPRPSR 155
           + R+ A+ NS+A+IG VE A+  +R+L A L +PSS     R  F+PR SR
Sbjct: 121 NLRKLALMNSLAKIGSVE-AERFRRSLAANLAKPSSLHSHRRPEFRPRLSR 169

[Close]
BLAST of CmoCh09G011800 vs. NCBI nr
Match: gi|659108435|ref|XP_008454197.1| (PREDICTED: putative protein TPRXL [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 7.7e-40
Identity = 98/137 (71.53%), Postives = 108/137 (78.83%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKS 87
           ++QID R ASP RSISVQKNRD NANA    V SNKRK  +CSP+ HP SFRCSLH K S
Sbjct: 66  RFQIDQRSASPSRSISVQKNRDSNANA----VPSNKRKVCVCSPTKHPGSFRCSLH-KNS 125

Query: 88  RHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRSA 147
            HSV+  N S+  NGSL+ RRSAMTNS+ RIG VEGADLVKRAL ALIRPSSHQ R  SA
Sbjct: 126 THSVDVSNGSQLRNGSLNVRRSAMTNSLVRIGCVEGADLVKRALSALIRPSSHQQRRPSA 185

Query: 148 FQPRPSRLSVMSKAEQE 165
           FQ RPSRLS+MSKAE+E
Sbjct: 186 FQRRPSRLSLMSKAEEE 197

[Close]
BLAST of CmoCh09G011800 vs. NCBI nr
Match: gi|449469250|ref|XP_004152334.1| (PREDICTED: uncharacterized protein LOC101207294 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 92/138 (66.67%), Postives = 105/138 (76.09%), Query Frame = 1 

Query: 28  KYQIDPRPASPGR-SISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKK 87
           ++Q D R ASP R S+SVQKNRD NANA   V S+ K+   MCSP+ HP SFRCSLH K 
Sbjct: 54  RFQTDQRSASPSRRSVSVQKNRDSNANA---VPSNKKKVMCMCSPTKHPGSFRCSLH-KN 113

Query: 88  SRHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRS 147
           S HS++  N S+F N SL+ RRSAMTNS+ RI  VEGADLVKRAL ALIRPSSHQ R +S
Sbjct: 114 STHSIDISNGSQFRNVSLNIRRSAMTNSLVRIECVEGADLVKRALSALIRPSSHQQRRQS 173

Query: 148 AFQPRPSRLSVMSKAEQE 165
           AFQ RPS LSVMSKAE+E
Sbjct: 174 AFQRRPSHLSVMSKAEEE 187

[Close]
BLAST of CmoCh09G011800 vs. NCBI nr
Match: gi|823237870|ref|XP_012451582.1| (PREDICTED: uncharacterized protein LOC105773923 [Gossypium raimondii])

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-28
Identity = 83/136 (61.03%), Postives = 101/136 (74.26%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSIS-VQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKK 87
           ++ +D RP SP RSI+ ++KN D    A +N+    +++  MCSP+THP SFRCSLH  K
Sbjct: 76  RFSLDNRPISPNRSIATIRKNTD----AVQNLEKRQQKRTCMCSPTTHPGSFRCSLH--K 135

Query: 88  SRHSVNALNRSEFSNGSLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQLRPRS 147
             ++ NA++    SN  L+ RRSAMTNS+ RIGGVEG DLVKRAL ALIRPSSHQ R RS
Sbjct: 136 GFNNSNAVSSYAPSN-RLNARRSAMTNSLVRIGGVEG-DLVKRALSALIRPSSHQQRRRS 195

Query: 148 AFQPRPSRLSVMSKAE 163
           AFQPRPSRLSVMSKAE
Sbjct: 196 AFQPRPSRLSVMSKAE 203

[Close]
BLAST of CmoCh09G011800 vs. NCBI nr
Match: gi|702484467|ref|XP_010033986.1| (PREDICTED: uncharacterized protein LOC104423200 [Eucalyptus grandis])

HSP 1 Score: 134.4 bits (337), Expect = 1.8e-28
Identity = 88/163 (53.99%), Postives = 108/163 (66.26%), Query Frame = 1 

Query: 6   GSNSPQV-----SSLSSLEIKFVGICGKYQIDPRPASPGRSISVQKNRDGNANANENVVS 65
           G++ P+V     SS SS  ++F        ID RP SPGRSISV+    G         +
Sbjct: 50  GASPPRVRMSGHSSQSSSSVRF-------SID-RPTSPGRSISVRNQIGGGGGGGGRATT 109

Query: 66  -SNKRKWWMCSPSTHPASFRCSLHNKKSRHSVNALNRSEFSNGSLDFRRSAMTNSIARIG 125
             N++K  MCSP++HP SFRC+LH K SR +    + +  S+ SL+FRRSAMTNS+ RIG
Sbjct: 110 VPNQKKTCMCSPTSHPGSFRCALH-KNSRSNPQHHSGTYNSSRSLNFRRSAMTNSLVRIG 169

Query: 126 GVEGADLVKRALLALIRPSSHQLRPRSAFQPRPSRLSVMSKAE 163
           GVEG DLVKRAL ALIRPSSHQLR R+ F+PRPSRLS MS AE
Sbjct: 170 GVEG-DLVKRALAALIRPSSHQLRRRADFKPRPSRLSTMSSAE 202

[Close]
BLAST of CmoCh09G011800 vs. NCBI nr
Match: gi|823226238|ref|XP_012445937.1| (PREDICTED: uncharacterized protein LOC105769688 [Gossypium raimondii])

HSP 1 Score: 133.3 bits (334), Expect = 3.9e-28
Identity = 81/140 (57.86%), Postives = 93/140 (66.43%), Query Frame = 1 

Query: 28  KYQIDPRPASPGRSISVQKNRDGNANANENVVSSNKRKWWMCSPSTHPASFRCSLHNKKS 87
           ++ +D RP SP RSIS  +    N  A  N+ S   ++  MCSP+THP SFRCSLH    
Sbjct: 77  RFSLDSRPISPNRSISAVRR---NTEALRNLQSKQPKRTCMCSPTTHPGSFRCSLHK--- 136

Query: 88  RHSVNALNRSEFSNG-----SLDFRRSAMTNSIARIGGVEGADLVKRALLALIRPSSHQL 147
                  N S  S+G      L+ RRSAMTNS+ RIGGVEG DLVKRAL ALIRPSSHQ 
Sbjct: 137 -----GFNNSHASSGYAPSNRLNARRSAMTNSLVRIGGVEG-DLVKRALSALIRPSSHQQ 196

Query: 148 RPRSAFQPRPSRLSVMSKAE 163
           R R+AFQPRPSRLSVMSKAE
Sbjct: 197 RRRAAFQPRPSRLSVMSKAE 204

The following BLAST results are available for this feature:
BLAST of CmoCh09G011800 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh09G011800 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWX3_CUCSA1.0e-3566.67Uncharacterized protein OS=Cucumis sativus GN=Csa_4G006290 PE=4 SV=1[more]
A0A0D2U702_GOSRA7.2e-2961.03Uncharacterized protein OS=Gossypium raimondii GN=B456_010G057600 PE=4 SV=1[more]
A0A059AJL4_EUCGR1.2e-2853.99Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03089 PE=4 SV=1[more]
A0A0D2RS30_GOSRA2.8e-2857.86Uncharacterized protein OS=Gossypium raimondii GN=B456_009G013700 PE=4 SV=1[more]
Q8H6R2_PONTR6.1e-2854.74CTV.15 OS=Poncirus trifoliata GN=CTV.15 PE=4 SV=1[more]
BLAST of CmoCh09G011800 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25280.19.3e-2852.59 serine-rich protein-related[more]
AT5G11090.13.9e-2649.64 serine-rich protein-related[more]
AT5G20370.14.4e-0944.14 serine-rich protein-related[more]
BLAST of CmoCh09G011800 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108435|ref|XP_008454197.1|7.7e-4071.53PREDICTED: putative protein TPRXL [Cucumis melo][more]
gi|449469250|ref|XP_004152334.1|1.5e-3566.67PREDICTED: uncharacterized protein LOC101207294 [Cucumis sativus][more]
gi|823237870|ref|XP_012451582.1|1.0e-2861.03PREDICTED: uncharacterized protein LOC105773923 [Gossypium raimondii][more]
gi|702484467|ref|XP_010033986.1|1.8e-2853.99PREDICTED: uncharacterized protein LOC104423200 [Eucalyptus grandis][more]
gi|823226238|ref|XP_012445937.1|3.9e-2857.86PREDICTED: uncharacterized protein LOC105769688 [Gossypium raimondii][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G011800.1CmoCh09G011800.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33132FAMILY NOT NAMEDcoord: 36..164
score: 8.3
NoneNo IPR availablePANTHERPTHR33132:SF12SUBFAMILY NOT NAMEDcoord: 36..164
score: 8.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh09G011800Watermelon (97103) v2cmowmbB029
CmoCh09G011800Wax gourdcmowgoB0012
CmoCh09G011800Cucurbita maxima (Rimu)cmacmoB027
CmoCh09G011800Cucurbita maxima (Rimu)cmacmoB441
CmoCh09G011800Watermelon (Charleston Gray)cmowcgB028
CmoCh09G011800Watermelon (97103) v1cmowmB012
CmoCh09G011800Cucurbita pepo (Zucchini)cmocpeB012
CmoCh09G011800Cucurbita pepo (Zucchini)cmocpeB021
CmoCh09G011800Bottle gourd (USVL1VR-Ls)cmolsiB026
CmoCh09G011800Melon (DHL92) v3.6.1cmomedB016
CmoCh09G011800Cucumber (Chinese Long) v3cmocucB0030