CmoCh09G000600.1 (mRNA) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGCGAAGGCGCGAATCGCAGTTGCCGTCGATCGGTTTCCAGTTGATTTCGCGATTCTTGATTATATGAATTCCTGGTTGAAAAGTAATCTTTAAGCGTTTACGTAATCGAATTCATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGTACGTATCCCTCTCGCTGCTTGTAATCGTATCCCAATATCGATCACGATTTAGACTATTGCGATGAAACTCTCTGGAAAACCGTAATCAATTACCAAGTGAAGTTTCATCTGTATAAAATTGTAATTCGTTTAATTAGGGTTCACTTCTGGTTCAATTGAATCAAAAGTTTTCGGCGAGAAGTAAAGTTTATGAGATCAACCTTGTTCTTTATGCTAAGGAAGATTCTCTGGTGAAATTATTATTTGCAGATTCAATTCTCGAGTTTTTGGATCGATTTATTATGTTCTTTGTGCACTTTTTTGTTTACTTTTACAATATTGGAAGTTGAAATGGCAATGGATTACATATGCATCCTTTTCTCGCTCACCATCCGCTTTTAAGAAAAGGAAATTGGAAATGACGTAGGACAATGTTTTCTTGCCGATGTCAGGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCGTAAGTTCACCGTGGTCGTTTCTGCATTTGTTGCAACACAGATATACTCTTTATCTTATTTTGTTTACTTGTTTAGTGTTTTTTGTTTTCCCATGCAGCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG CGCGAAGGCGCGAATCGCAGTTGCCGTCGATCGGTTTCCAGTTGATTTCGCGATTCTTGATTATATGAATTCCTGGTTGAAAAGTAATCTTTAAGCGTTTACGTAATCGAATTCATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG ATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG
BLAST of CmoCh09G000600.1 vs. Swiss-Prot
Match: DPM1_CRIGR (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cricetulus griseus GN=DPM1 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16 Identity = 40/73 (54.79%), Postives = 58/73 (79.45%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. Swiss-Prot
Match: DPM1_SCHPO (Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpm1 PE=2 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. Swiss-Prot
Match: DPM1_HUMAN (Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 2.1e-16 Identity = 39/73 (53.42%), Postives = 58/73 (79.45%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. Swiss-Prot
Match: DPM1_MOUSE (Dolichol-phosphate mannosyltransferase subunit 1 OS=Mus musculus GN=Dpm1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.1e-15 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. Swiss-Prot
Match: DPM1_DROME (Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.1e-15 Identity = 36/72 (50.00%), Postives = 57/72 (79.17%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TrEMBL
Match: A0A0A0L0P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658550 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.3e-27 Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TrEMBL
Match: M1AM66_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009980 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TrEMBL
Match: A0A067KL12_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08088 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TrEMBL
Match: K4BVW6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TrEMBL
Match: A0A151RI07_CAJCA (Dolichol-phosphate mannosyltransferase OS=Cajanus cajan GN=KK1_036434 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 6.6e-25 Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. TAIR10
Match: AT1G20575.1 (AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein) HSP 1 Score: 114.4 bits (285), Expect = 3.1e-26 Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. NCBI nr
Match: gi|659104649|ref|XP_008452949.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo]) HSP 1 Score: 131.0 bits (328), Expect = 9.2e-28 Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. NCBI nr
Match: gi|449455593|ref|XP_004145537.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-26 Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. NCBI nr
Match: gi|1009128149|ref|XP_015881073.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Ziziphus jujuba]) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25 Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. NCBI nr
Match: gi|970024728|ref|XP_015073670.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Solanum pennellii]) HSP 1 Score: 121.7 bits (304), Expect = 5.6e-25 Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1
BLAST of CmoCh09G000600.1 vs. NCBI nr
Match: gi|802605979|ref|XP_012073661.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas]) HSP 1 Score: 121.7 bits (304), Expect = 5.6e-25 Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
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