CmoCh09G000600 (gene) Cucurbita moschata (Rifu)

NameCmoCh09G000600
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
Description(Dolichol-phosphate mannosyltransferase, putative) (2.4.1.83)
LocationCmo_Chr09 : 270185 .. 271063 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CGCGAAGGCGCGAATCGCAGTTGCCGTCGATCGGTTTCCAGTTGATTTCGCGATTCTTGATTATATGAATTCCTGGTTGAAAAGTAATCTTTAAGCGTTTACGTAATCGAATTCATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGTACGTATCCCTCTCGCTGCTTGTAATCGTATCCCAATATCGATCACGATTTAGACTATTGCGATGAAACTCTCTGGAAAACCGTAATCAATTACCAAGTGAAGTTTCATCTGTATAAAATTGTAATTCGTTTAATTAGGGTTCACTTCTGGTTCAATTGAATCAAAAGTTTTCGGCGAGAAGTAAAGTTTATGAGATCAACCTTGTTCTTTATGCTAAGGAAGATTCTCTGGTGAAATTATTATTTGCAGATTCAATTCTCGAGTTTTTGGATCGATTTATTATGTTCTTTGTGCACTTTTTTGTTTACTTTTACAATATTGGAAGTTGAAATGGCAATGGATTACATATGCATCCTTTTCTCGCTCACCATCCGCTTTTAAGAAAAGGAAATTGGAAATGACGTAGGACAATGTTTTCTTGCCGATGTCAGGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCGTAAGTTCACCGTGGTCGTTTCTGCATTTGTTGCAACACAGATATACTCTTTATCTTATTTTGTTTACTTGTTTAGTGTTTTTTGTTTTCCCATGCAGCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG

mRNA sequence

CGCGAAGGCGCGAATCGCAGTTGCCGTCGATCGGTTTCCAGTTGATTTCGCGATTCTTGATTATATGAATTCCTGGTTGAAAAGTAATCTTTAAGCGTTTACGTAATCGAATTCATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG

Coding sequence (CDS)

ATGGCGGAGCAGGAGAGGAATAAGTACAGTTTAACTTTCCCAACCTACAACGAGCGCCTCAATATTTCTCTGCTTGTCTACCTCATTCTCAAACACCTCACGGACGTTGATTTTGAAATAATTGTTGTTGATGATGGAAGTCCTGATGGTACTCAAGAAGTTATGAAACAGTTGCAAGGAGTATATGGTGAAGATCGGATCCTATTGAGAGCCAGACCTGGAAGCTTGGATTAG
BLAST of CmoCh09G000600 vs. Swiss-Prot
Match: DPM1_CRIGR (Dolichol-phosphate mannosyltransferase subunit 1 OS=Cricetulus griseus GN=DPM1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 40/73 (54.79%), Postives = 58/73 (79.45%), Query Frame = 1

Query: 6   RNKYSLTFPTYNERLNISLLVYLILKHLTD--VDFEIIVVDDGSPDGTQEVMKQLQGVYG 65
           R+KYS+  PTYNER N+ L+V+L++K  ++  +++EII++DDGSPDGT+EV +QL+ +YG
Sbjct: 30  RDKYSVLLPTYNERENLPLIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQLEKIYG 89

Query: 66  EDRILLRARPGSL 77
            DRILLR R   L
Sbjct: 90  PDRILLRPREKKL 102

BLAST of CmoCh09G000600 vs. Swiss-Prot
Match: DPM1_SCHPO (Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dpm1 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.6e-16
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 1

Query: 7  NKYSLTFPTYNERLNISLLVYLILKHLTD--VDFEIIVVDDGSPDGTQEVMKQLQGVYGE 66
          +KYS+  PTYNER N+ ++ YLI K      +D+EI+++DD SPDGTQEV K+LQ +YGE
Sbjct: 2  SKYSVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIYGE 61

Query: 67 DRILLRARPGSL 77
          D+ILL+ R G L
Sbjct: 62 DKILLKPRSGKL 73

BLAST of CmoCh09G000600 vs. Swiss-Prot
Match: DPM1_HUMAN (Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.1e-16
Identity = 39/73 (53.42%), Postives = 58/73 (79.45%), Query Frame = 1

Query: 6  RNKYSLTFPTYNERLNISLLVYLILKHLTD--VDFEIIVVDDGSPDGTQEVMKQLQGVYG 65
          +NKYS+  PTYNER N+ L+V+L++K  ++  +++EII++DDGSPDGT++V +QL+ +YG
Sbjct: 24 QNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYG 83

Query: 66 EDRILLRARPGSL 77
           DRILLR R   L
Sbjct: 84 SDRILLRPREKKL 96

BLAST of CmoCh09G000600 vs. Swiss-Prot
Match: DPM1_MOUSE (Dolichol-phosphate mannosyltransferase subunit 1 OS=Mus musculus GN=Dpm1 PE=1 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 1.1e-15
Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 1

Query: 6  RNKYSLTFPTYNERLNISLLVYLILKHLTD--VDFEIIVVDDGSPDGTQEVMKQLQGVYG 65
          ++KYS+  PTYNER N+ L+V+L++K  ++  +++EII++DDGSPDGT+EV +QL  +YG
Sbjct: 24 QDKYSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAEIYG 83

Query: 66 EDRILLRARPGSL 77
           DRILLR R   L
Sbjct: 84 PDRILLRPREKKL 96

BLAST of CmoCh09G000600 vs. Swiss-Prot
Match: DPM1_DROME (Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG10166 PE=3 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.1e-15
Identity = 36/72 (50.00%), Postives = 57/72 (79.17%), Query Frame = 1

Query: 7  NKYSLTFPTYNERLNISLLVYLILKHL--TDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 66
          +KYS+  PTYNE+ N+ ++++LI+K++  + +++E+IV+DDGSPDGT +V K LQ +YGE
Sbjct: 6  HKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIYGE 65

Query: 67 DRILLRARPGSL 77
          D+I+LR R   L
Sbjct: 66 DKIVLRPRGSKL 77

BLAST of CmoCh09G000600 vs. TrEMBL
Match: A0A0A0L0P4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658550 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 9.3e-27
Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 1

Query: 3  EQERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVY 62
          E+ER+KYSL  PTYNER+NI+LLVYLI KHL DVDFEIIVVDDGSPDGTQEV+KQLQG+Y
Sbjct: 5  EKERDKYSLIVPTYNERINIALLVYLIFKHLPDVDFEIIVVDDGSPDGTQEVVKQLQGLY 64

Query: 63 GEDRILLRARPGSL 77
          GEDRILLRARP  L
Sbjct: 65 GEDRILLRARPRKL 78

BLAST of CmoCh09G000600 vs. TrEMBL
Match: M1AM66_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009980 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1

Query: 5  ERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 64
          E+NKYS+  PTYNERLNI+L++YL+ KHLTDVDFEIIVVDDGSPDGTQ+++KQLQ VYGE
Sbjct: 3  EKNKYSIIIPTYNERLNIALIIYLVFKHLTDVDFEIIVVDDGSPDGTQDIVKQLQKVYGE 62

Query: 65 DRILLRARPGSL 77
          DRILLR RP  L
Sbjct: 63 DRILLRPRPRKL 74

BLAST of CmoCh09G000600 vs. TrEMBL
Match: A0A067KL12_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08088 PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25
Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1

Query: 5  ERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 64
          E+NKYS+  PTYNERLNI+L+VYLI KHL DVDFEIIVVDDGSPDGTQEV+KQLQ VYGE
Sbjct: 2  EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61

Query: 65 DRILLRARPGSL 77
          DRILLR RP  L
Sbjct: 62 DRILLRPRPKKL 73

BLAST of CmoCh09G000600 vs. TrEMBL
Match: K4BVW6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-25
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1

Query: 5  ERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 64
          E+NKYS+  PTYNERLNI+L++YL+ KHLTDVDFEIIVVDDGSPDGTQ+++KQLQ VYGE
Sbjct: 3  EKNKYSIIIPTYNERLNIALIIYLVFKHLTDVDFEIIVVDDGSPDGTQDIVKQLQKVYGE 62

Query: 65 DRILLRARPGSL 77
          DRILLR RP  L
Sbjct: 63 DRILLRPRPRKL 74

BLAST of CmoCh09G000600 vs. TrEMBL
Match: A0A151RI07_CAJCA (Dolichol-phosphate mannosyltransferase OS=Cajanus cajan GN=KK1_036434 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 6.6e-25
Identity = 58/74 (78.38%), Postives = 66/74 (89.19%), Query Frame = 1

Query: 3  EQERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVY 62
          ++++NKYS+  PTYNERLNI L+VYLI KHL DVDFEIIVVDDGSPDGTQ+V+KQLQ VY
Sbjct: 6  QKQKNKYSIIVPTYNERLNIGLIVYLIFKHLGDVDFEIIVVDDGSPDGTQDVVKQLQQVY 65

Query: 63 GEDRILLRARPGSL 77
          GEDRILLRARP  L
Sbjct: 66 GEDRILLRARPRKL 79

BLAST of CmoCh09G000600 vs. TAIR10
Match: AT1G20575.1 (AT1G20575.1 Nucleotide-diphospho-sugar transferases superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 3.1e-26
Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 1

Query: 4  QERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYG 63
          +++ KYS+  PTYNERLNI+++VYLI KHL DVDFEIIVVDDGSPDGTQE++KQLQ +YG
Sbjct: 10 EKKYKYSIIIPTYNERLNIAIIVYLIFKHLRDVDFEIIVVDDGSPDGTQEIVKQLQQLYG 69

Query: 64 EDRILLRARPGSL 77
          EDRILLRAR   L
Sbjct: 70 EDRILLRARAKKL 82

BLAST of CmoCh09G000600 vs. NCBI nr
Match: gi|659104649|ref|XP_008452949.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo])

HSP 1 Score: 131.0 bits (328), Expect = 9.2e-28
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 1

Query: 3  EQERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVY 62
          E+ERNKYSL  PTYNERLNI+LLVYLI KHL DVDFEIIVVDDGSPDGTQEV+KQLQGVY
Sbjct: 5  EKERNKYSLIVPTYNERLNIALLVYLIFKHLPDVDFEIIVVDDGSPDGTQEVVKQLQGVY 64

Query: 63 GEDRILLRARPGSL 77
          GEDRILLRARP  L
Sbjct: 65 GEDRILLRARPRKL 78

BLAST of CmoCh09G000600 vs. NCBI nr
Match: gi|449455593|ref|XP_004145537.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis sativus])

HSP 1 Score: 127.1 bits (318), Expect = 1.3e-26
Identity = 62/74 (83.78%), Postives = 68/74 (91.89%), Query Frame = 1

Query: 3  EQERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVY 62
          E+ER+KYSL  PTYNER+NI+LLVYLI KHL DVDFEIIVVDDGSPDGTQEV+KQLQG+Y
Sbjct: 5  EKERDKYSLIVPTYNERINIALLVYLIFKHLPDVDFEIIVVDDGSPDGTQEVVKQLQGLY 64

Query: 63 GEDRILLRARPGSL 77
          GEDRILLRARP  L
Sbjct: 65 GEDRILLRARPRKL 78

BLAST of CmoCh09G000600 vs. NCBI nr
Match: gi|1009128149|ref|XP_015881073.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Ziziphus jujuba])

HSP 1 Score: 124.0 bits (310), Expect = 1.1e-25
Identity = 60/73 (82.19%), Postives = 66/73 (90.41%), Query Frame = 1

Query: 4  QERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYG 63
          +E+NKYS+  PTYNERLNI+LLVYLI KHL DVDFEIIVVDDGSPDGTQE++KQLQ VYG
Sbjct: 8  KEKNKYSIIVPTYNERLNIALLVYLIFKHLRDVDFEIIVVDDGSPDGTQEIIKQLQQVYG 67

Query: 64 EDRILLRARPGSL 77
          EDRILLRARP  L
Sbjct: 68 EDRILLRARPRKL 80

BLAST of CmoCh09G000600 vs. NCBI nr
Match: gi|970024728|ref|XP_015073670.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Solanum pennellii])

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-25
Identity = 56/72 (77.78%), Postives = 65/72 (90.28%), Query Frame = 1

Query: 5  ERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 64
          E+NKYS+  PTYNERLNI+L++YL+ KHLTDVDFEIIVVDDGSPDGTQ+++KQLQ VYGE
Sbjct: 3  EKNKYSIIIPTYNERLNIALIIYLVFKHLTDVDFEIIVVDDGSPDGTQDIVKQLQKVYGE 62

Query: 65 DRILLRARPGSL 77
          DRILLR RP  L
Sbjct: 63 DRILLRPRPRKL 74

BLAST of CmoCh09G000600 vs. NCBI nr
Match: gi|802605979|ref|XP_012073661.1| (PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas])

HSP 1 Score: 121.7 bits (304), Expect = 5.6e-25
Identity = 59/72 (81.94%), Postives = 64/72 (88.89%), Query Frame = 1

Query: 5  ERNKYSLTFPTYNERLNISLLVYLILKHLTDVDFEIIVVDDGSPDGTQEVMKQLQGVYGE 64
          E+NKYS+  PTYNERLNI+L+VYLI KHL DVDFEIIVVDDGSPDGTQEV+KQLQ VYGE
Sbjct: 2  EKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQVYGE 61

Query: 65 DRILLRARPGSL 77
          DRILLR RP  L
Sbjct: 62 DRILLRPRPKKL 73

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
DPM1_CRIGR1.6e-1654.79Dolichol-phosphate mannosyltransferase subunit 1 OS=Cricetulus griseus GN=DPM1 P... [more]
DPM1_SCHPO1.6e-1655.56Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe (strain 972 ... [more]
DPM1_HUMAN2.1e-1653.42Dolichol-phosphate mannosyltransferase subunit 1 OS=Homo sapiens GN=DPM1 PE=1 SV... [more]
DPM1_MOUSE1.1e-1553.42Dolichol-phosphate mannosyltransferase subunit 1 OS=Mus musculus GN=Dpm1 PE=1 SV... [more]
DPM1_DROME3.1e-1550.00Probable dolichol-phosphate mannosyltransferase OS=Drosophila melanogaster GN=CG... [more]
Match NameE-valueIdentityDescription
A0A0A0L0P4_CUCSA9.3e-2783.78Uncharacterized protein OS=Cucumis sativus GN=Csa_4G658550 PE=4 SV=1[more]
M1AM66_SOLTU3.9e-2577.78Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400009980 PE=4 SV=1[more]
A0A067KL12_JATCU3.9e-2581.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08088 PE=4 SV=1[more]
K4BVW6_SOLLC3.9e-2577.78Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A151RI07_CAJCA6.6e-2578.38Dolichol-phosphate mannosyltransferase OS=Cajanus cajan GN=KK1_036434 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G20575.13.1e-2673.97 Nucleotide-diphospho-sugar transferases superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659104649|ref|XP_008452949.1|9.2e-2887.84PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis melo][more]
gi|449455593|ref|XP_004145537.1|1.3e-2683.78PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Cucumis sativus][more]
gi|1009128149|ref|XP_015881073.1|1.1e-2582.19PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Ziziphus jujuba][more]
gi|970024728|ref|XP_015073670.1|5.6e-2577.78PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Solanum pennellii][more]
gi|802605979|ref|XP_012073661.1|5.6e-2581.94PREDICTED: dolichol-phosphate mannosyltransferase subunit 1 [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001173Glyco_trans_2-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0097502 mannosylation
biological_process GO:0060359 response to ammonium ion
biological_process GO:0008150 biological_process
cellular_component GO:0000136 alpha-1,6-mannosyltransferase complex
cellular_component GO:0033185 dolichol-phosphate-mannose synthase complex
cellular_component GO:0005783 endoplasmic reticulum
cellular_component GO:0005575 cellular_component
molecular_function GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G000600.1CmoCh09G000600.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001173Glycosyltransferase 2-likePFAMPF00535Glycos_transf_2coord: 13..71
score: 3.5
NoneNo IPR availablePANTHERPTHR10859GLYCOSYL TRANSFERASEcoord: 6..73
score: 1.1