CmoCh08G002900.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh08G002900.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionChromatin modification MEAF6-like protein
LocationCmo_Chr08 : 1788398 .. 1793055 (-)
Sequence length992
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGTAAGGGAAAGATTCATTTCGTAGGCTTGATATGATACATACAGTTCAGTTCTCTTCCAATCCTAATTTGAGGTCATAGTCGAAGTCTAAAATAGTCTCTTCATCTCTTCCTACTATAACTCATGATTAGAAATTTTATAAAGTTGTCACGTAAAAGTTTATTGTGACATAGAACCTTTTCGGGATCTTGAAAAGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTATGGTTGATTTACCATTTTAATTCTACCATGCATGTGTATCTTGGACGATAAAGCCTCTCATAACTAGTTCACAAAAATATTTGCAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGTGCCCAAACTTTTGATAAATGAAAAATATTGTAAAAGTTCGTGAGAAAAAAAAAATAATTAGAGGATTATTAAATAGGATATTTTTCATTGTATTTTAAAATTTTATTAGTGTATAAAGGACTCGATTGAAATATTATTTTAAAAATGTTCAAGACAATTTTAGGTTAAATTATAAATTTGGTCTCTCTAATTTAAAATTTAACAAAATTTTGAATAATTATTTTTGTTATTAATATATATTTAAGATATGAATGCATTTTTTAATCCGAAAAAAAAAAAACAACTAAAATATTTAAAATTTTATAAATGATTATGTATTAAAATGTATTTTTTATGTGGTTTAAAAAAAGGAAAATGTTTTTATTTTTGAATTTAGAATTTAAAAAAAGGTAAATAAATAAAGAAGCAATAAAGATTAATTTGTAATGTATTTTATTCCCAAATAAATAAGATTTTGGTAGATTCTTCGTGTTCTTCAAAATTTCCCCCAATTATCTTAGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTAACCGTTACATTCCTCTTCGATTTTTTCTCTTCTTCTCAATTTGAATTCGTCTGTTCTTCGCGCTCTTGATTATGGAAAATTATGTTTCAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTTTTTACGCTTTTTGTTTTCTGTTTACGATTTTATTTGCCTATCTATCTACGTTTCTACACTTATTACGTTTTTGTTATTTGAATTCTTGTGTCACTTGTTCTGAATTCACTGTCTGATTAGTGATTGTGAGTCAAACTATAGAAGTGTATTGAAGGCATTGATTTGGTCGTCATATCCGCATTTGATCTTTAGAGAAGTTGTAATTAAAAATTAACTTCTTGCGAGCTAAATGTTCCTGAAAAAATTGGTGATCTATTTCCATATCTCAGTGCGACAATGCACCACGGAATTCACTAATATGTATGGTGCTTAGAAGTAAGGATGGGCTAGACAAACGAAGACAAATTCCTTTTAGTAATGACTGGACCTAGAACTATAAATGCTTCAACAAATTCTAAACCTTTTTCTAATCCTTTCTCTTTCAGTATATTTATCTAATTTCTCAAATTAGATTGTGGTTCCAGAATTACACTGGTTTATGGTTTCTTTATTTATTGTGAATTTTGTAGATCAGTTATTTATTTCCTTGAGATGGAATGAGAATATTTTATTTTAGTTTTATTTATGAAATTTCTAGGCTTTAAGGATTTTTCGTTTATTGCATGTTTTATAGGCTGTCTTTGTCGCCATATCAGTGAGAGGAATTTCCTTTAGAAAGAAAAAGATTGCAGTTTGACACTAGTTGTAGTTAGAACAGTCAATGTTATGTGGTTTTATGTCCTCAAGCATCAAACTGTTACCTGAAATGCAGTCTAATTTGATATGGAAATGAAAAACTTTGAAGAAAGTGAGGCTTTTTCTGTGGACCCTCTACCTAAAAGAAGTGCTAATGGCAGAATTTAGAAGAAACTTCTTAAGAACAACAAATTGGAACTCTCTATTAAAGCTATAAGAACCACACAATTACAACATAACCCTCCAGCTGGGGTTGACTATATTATGAGAATAATATCTTTTACATGAATTTAATGATCGTTCTTGAAAGATTCATTGGCAAACCAATTACACTAAAGAGAAGTTTTTACTGCATTTACCCATAACAACCTAGCTTTATTTTTCAGCCTTACTCCCATTAGCAGCAGGAGAGTTCTACCTTTATCTTTTATCAAAAACCAAAGAATATTAAAGATTTTAAGAAACGTTCTCCCAACTTATTGCACCTGCAGAAAGTAATTTTTTTTTTTTTTTTAAAAAAAAAAATTGAACAAGAAACTGAAACTTTTTGTTGATATCATTATGTATAAAGTTACAATAAACTTAACCTTTTCTTTCATGGGTAGCTAAATTTTAATAGTTTACCCCATTAGCAAAAAACAGCAGTGTTGTATTCTTAATAAAAATTTAGGATAACTTCTTTGGCTTTTCTTCCATGTAATGTCAATACTTATATTCTGTAAAATATGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTGTATGGAGTGTCTATAATATTATTTCTCAGCAAATTTCCTTTTAAGTTTCTTGATTCTTGCGTGTTCTTGTCTTCTTAACACACTGAGGTTTATGTTAATTGAATTTTCGTTTACTAATGGGATCTATGAAATTTTCTCTTTCCTATGAAAATATAATTTAGGGAAAAATTACACTTAGATCTTTGGGGGGTGGTGTTCGTTTAATGTTCAGTATTTTTACGAAGTTTTTTTTTTTTTTCCGTCTGTTTATCTTATTGTTAGGTCATATTTTGGGTACTTGAGTAAAGTTTCCAAATACTTGTGGATGCAGTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGTATGTACTTTGACTCAACCTGTGGTGGAATTGGAAATTTAGGTTTTTTCTGGTTATTCTGGTCGACTCTCTCACATGTACTGTTTTTCATTTAATGAGCAAAGAAGTTGAGATTCTCCTATGCTTATGTATCTTGCATTAGATACTACAATTAAATTCTTCCTACTTACAGGACAAAGAACTTCTCCTTGGTGCCATAGTTTTTCCCGAGAATACTTTTAGTTATGCTATACGAAAAATCATTTTTCATAGTTTTTCCTTGGGAGGGCAGTCCTAGAAAGTAAGGGTTTTGGAAGCTGATTATTGAGAAGGTGGATTGTAGTGAGAAAGGTAAGAAGATTAAGGTTGACTTTATGTAATGCTGCTGCTCTTGAGAGCCTTCCTGCTTATTTTATGTCTGTTTACCTTTTACCGAAGGAAGTGAGAGATAAAGGGAAAGAAAAATTTAAATTTTCCTTCAAGATGAAATATTGGGCGAAAGTTGAATAATTTAGCCTCGTTTGATAACCATTTGGTTTTTGAAATTAAGCTTATTAGTTCAGATTTTTCTTTTGTTATCCACTCTCTATCAATGTTTTCAAAAATCAAACCAAGTTTTGAGAACTAGGGTTTAGGGTGCTGTTCCAATACTAAGAGATGTTAAAATGCAGAGAAGAGCATGATATGGCATTGATGTTTCACTGCATACGCTATAGAATATACTTTGTTTTCCATCTGGAAAATGTAAAATTTGTTATCTTCTACTTTAGCCCTTTTCAGATTTCATATTTTCTTTTTTCTTTTCCCTTCAATTTTCAGGCTGAAGAGCTTGCAGCTGGACGAGATGGTGAGCGATATCAGTAAGAATAAATACTTCTATTTTCTGGAATTAAAATTTTACAGTCTTCTTTTGTGAACCATGTTGAAGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAGTTAGTATTCTTCCAATTGTTTCCTTCGTTTGATGATGTTGCTTTAAATTTCTAACTTGAACACCATTTAACAATAAACACCCTCATATCTGTAACCTGAACTATTTTACTTCATAACAATGAGCTTTGAAGGTTTTTTTTTTAATCTTCAGTTAGTTTATGTGAAAATTTATGCTTTGGATATGCAGAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGAATGCTGTAAATCGAGCCTCTGATGGTGTCTTTGTCATCATCTACAGAGGTGAAAGACGAGCTCTCCGACTCCTCTTGTTCACCAAGTAACCAACCCGTCCTCACCGAGGCCAACGGGGGCAGGTATAGCTATTTATATCTGTGTTTGGCCACACTTGTTAGATGCTTTTATATTATAAATGTGTGAATAGAGTTCAAGTCGATAACATGAAGTACTACTAAATGTTTGACGATTGGAACTATGCTGCTTTGCTTACGAAGGAGTATTGCTAAACAAAATTTTAAATTGTCCATTTGGTC

mRNA sequence

ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGAATGCTGTAAATCGAGCCTCTGATGGTGTCTTTGTCATCATCTACAGAGGTGAAAGACGAGCTCTCCGACTCCTCTTGTTCACCAAGTAACCAACCCGTCCTCACCGAGGCCAACGGGGGCAGGTATAGCTATTTATATCTGTGTTTGGCCACACTTGTTAGATGCTTTTATATTATAAATGTGTGAATAGAGTTCAAGTCGATAACATGAAGTACTACTAAATGTTTGACGATTGGAACTATGCTGCTTTGCTTACGAAGGAGTATTGCTAAACAAAATTTTAAATTGTCCATTTGGTC

Coding sequence (CDS)

ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGA
Homology
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BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match: EAF6_MOUSE (Chromatin modification-related protein MEAF6 OS=Mus musculus GN=Meaf6 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 

Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

[Close]
BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match: EAF6_XENTR (Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis GN=meaf6 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 

Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

[Close]
BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match: EAF6_XENLA (Chromatin modification-related protein MEAF6 OS=Xenopus laevis GN=meaf6 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1 

Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSSLAGVQD---QLIEKREPGSGTESD 123

[Close]
BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match: EAF6_CHICK (Chromatin modification-related protein MEAF6 OS=Gallus gallus GN=MEAF6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.5e-09
Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 1 

Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 21  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG--KPKKGRP 208
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+       ++  P
Sbjct: 81  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESDTSPDFHNQENEP 140

Query: 209 TPRDAKRM 213
           +  DA+ +
Sbjct: 141 SQEDAEEL 145

[Close]
BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match: EAF6_BOVIN (Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-09
Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 1 

Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTP 208
           +RKF+  +RLFS SSVTS AA    AG  D   +                 K + G  T 
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIE-----------------KREPGSGTE 138

Query: 209 RDAKRMRHSSEQDFDYDDDPDL 229
            D     H+ E + + +D  DL
Sbjct: 139 SDTSPDFHNQENEPNQEDPEDL 143

[Close]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match: A0A0A0K8N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375790 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.8e-76
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           MEAEGQKTATNPSAMLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLSASKS+ALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYS 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRP PRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match: I3SAI9_MEDTR (Chromatin modification MEAF6-like protein OS=Medicago truncatula GN=MTR_1g069925 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 132/157 (84.08%), Postives = 145/157 (92.36%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK+A NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKSAVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS++K++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSTKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGTIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPD+TL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARASSEQDFDYEDDPDMTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match: A0A0L9TXF6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g137500 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match: A0A0S3SR85_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G205600 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match: V7BH93_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G193100g PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.6e-66
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLT+
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTM 157

[Close]
BLAST of CmoCh08G002900.1 vs. TAIR10
Match: AT4G14385.1 (AT4G14385.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 184.5 bits (467), Expect = 7.4e-47
Identity = 100/156 (64.10%), Postives = 124/156 (79.49%), Query Frame = 1 

Query: 78  GQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSA 137
           GQK++T+P AML  LL +R KL  ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+
Sbjct: 4   GQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSS 63

Query: 138 SKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG 197
           SKS+A  KRSRKFQ +DR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG    + QG
Sbjct: 64  SKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG---LSTQG 123

Query: 198 KPKKGRP---TPRDAKRMRHSSEQDFDYDDDPDLTL 231
           KPKKGR      R+AKR R S+E D++ +DDPD+ +
Sbjct: 124 KPKKGRGQSIIAREAKRSRPSTEPDYEDEDDPDMNM 156

[Close]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match: gi|778727407|ref|XP_011659255.1| (PREDICTED: chromatin modification-related protein MEAF6 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 5.5e-76
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           MEAEGQKTATNPSAMLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLSASKS+ALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYS 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRP PRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match: gi|502115003|ref|XP_004495102.1| (PREDICTED: chromatin modification-related protein MEAF6-like [Cicer arietinum])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           M++EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MDSEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARVSSEQDFDYEDDPDLTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match: gi|1009173960|ref|XP_015868096.1| (PREDICTED: chromatin modification-related protein MEAF6 [Ziziphus jujuba])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 133/157 (84.71%), Postives = 146/157 (92.99%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           M++E QK++ NPSAMLA LL RR KL +ELR IE+QVYDMET+YLQDPSQCGNVLKGFEG
Sbjct: 1   MDSEAQKSSLNPSAMLASLLGRRTKLQEELRNIERQVYDMETSYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SKS+ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSSKSTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGSIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRPTPRDAKR+R SSEQDFDYDDDP+LTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRIRPSSEQDFDYDDDPELTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match: gi|922402711|ref|XP_013468491.1| (chromatin modification MEAF6-like protein [Medicago truncatula])

HSP 1 Score: 260.8 bits (665), Expect = 2.3e-66
Identity = 132/157 (84.08%), Postives = 145/157 (92.36%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK+A NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKSAVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS++K++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSTKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGTIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPD+TL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARASSEQDFDYEDDPDMTL 157

[Close]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match: gi|951056423|ref|XP_014521759.1| (PREDICTED: chromatin modification-related protein MEAF6 isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 260.4 bits (664), Expect = 3.0e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1 

Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

The following BLAST results are available for this feature:
BLAST of CmoCh08G002900.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
EAF6_MOUSE1.5e-0938.89Chromatin modification-related protein MEAF6 OS=Mus musculus GN=Meaf6 PE=1 SV=1[more]
EAF6_XENTR1.5e-0938.89Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis GN=meaf6 PE=2... [more]
EAF6_XENLA2.0e-0938.89Chromatin modification-related protein MEAF6 OS=Xenopus laevis GN=meaf6 PE=2 SV=... [more]
EAF6_CHICK7.5e-0935.16Chromatin modification-related protein MEAF6 OS=Gallus gallus GN=MEAF6 PE=2 SV=1[more]
EAF6_BOVIN9.8e-0932.39Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6 PE=2 SV=2[more]
BLAST of CmoCh08G002900.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8N8_CUCSA3.8e-7695.54Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375790 PE=4 SV=1[more]
I3SAI9_MEDTR1.6e-6684.08Chromatin modification MEAF6-like protein OS=Medicago truncatula GN=MTR_1g069925... [more]
A0A0L9TXF6_PHAAN2.1e-6685.35Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g137500 PE=4 SV=1[more]
A0A0S3SR85_PHAAN2.1e-6685.35Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G205600 PE=... [more]
V7BH93_PHAVU3.6e-6684.71Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G193100g PE=4 SV=1[more]
BLAST of CmoCh08G002900.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G14385.17.4e-4764.10 FUNCTIONS IN: molecular_function unknown[more]
BLAST of CmoCh08G002900.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778727407|ref|XP_011659255.1|5.5e-7695.54PREDICTED: chromatin modification-related protein MEAF6 [Cucumis sativus][more]
gi|502115003|ref|XP_004495102.1|1.3e-6684.71PREDICTED: chromatin modification-related protein MEAF6-like [Cicer arietinum][more]
gi|1009173960|ref|XP_015868096.1|1.3e-6684.71PREDICTED: chromatin modification-related protein MEAF6 [Ziziphus jujuba][more]
gi|922402711|ref|XP_013468491.1|2.3e-6684.08chromatin modification MEAF6-like protein [Medicago truncatula][more]
gi|951056423|ref|XP_014521759.1|3.0e-6685.35PREDICTED: chromatin modification-related protein MEAF6 isoform X1 [Vigna radiat... [more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR015418Eaf6
Vocabulary: Cellular Component
TermDefinition
GO:0000123histone acetyltransferase complex
Vocabulary: Biological Process
TermDefinition
GO:0016573histone acetylation
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016573 histone acetylation
biological_process GO:0048573 photoperiodism, flowering
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005773 vacuole
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh08G002900CmoCh08G002900gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh08G002900.1CmoCh08G002900.1-proteinpolypeptide


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002900.1.three_prime_UTR.1CmoCh08G002900.1.three_prime_UTR.1three_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002900.1.CDS.10CmoCh08G002900.1.CDS.10CDS
CmoCh08G002900.1.CDS.9CmoCh08G002900.1.CDS.9CDS
CmoCh08G002900.1.CDS.8CmoCh08G002900.1.CDS.8CDS
CmoCh08G002900.1.CDS.7CmoCh08G002900.1.CDS.7CDS
CmoCh08G002900.1.CDS.6CmoCh08G002900.1.CDS.6CDS
CmoCh08G002900.1.CDS.5CmoCh08G002900.1.CDS.5CDS
CmoCh08G002900.1.CDS.4CmoCh08G002900.1.CDS.4CDS
CmoCh08G002900.1.CDS.3CmoCh08G002900.1.CDS.3CDS
CmoCh08G002900.1.CDS.2CmoCh08G002900.1.CDS.2CDS
CmoCh08G002900.1.CDS.1CmoCh08G002900.1.CDS.1CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh08G002900.1.exon.10CmoCh08G002900.1.exon.10exon
CmoCh08G002900.1.exon.9CmoCh08G002900.1.exon.9exon
CmoCh08G002900.1.exon.8CmoCh08G002900.1.exon.8exon
CmoCh08G002900.1.exon.7CmoCh08G002900.1.exon.7exon
CmoCh08G002900.1.exon.6CmoCh08G002900.1.exon.6exon
CmoCh08G002900.1.exon.5CmoCh08G002900.1.exon.5exon
CmoCh08G002900.1.exon.4CmoCh08G002900.1.exon.4exon
CmoCh08G002900.1.exon.3CmoCh08G002900.1.exon.3exon
CmoCh08G002900.1.exon.2CmoCh08G002900.1.exon.2exon
CmoCh08G002900.1.exon.1CmoCh08G002900.1.exon.1exon


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015418Chromatin modification-related protein Eaf6PFAMPF09340NuA4coord: 89..165
score: 1.9
NoneNo IPR availableunknownCoilCoilcoord: 89..109
scor
NoneNo IPR availablePANTHERPTHR13476UNCHARACTERIZEDcoord: 13..230
score: 7.3E
NoneNo IPR availablePANTHERPTHR13476:SF2HISTONE ACETYLTRANSFERASE SUBUNIT NUA4-DOMAIN CONTAINING PROTEINcoord: 13..230
score: 7.3E