CmoCh08G002900 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh08G002900
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Chromatin modification MEAF6-like protein
Location	Cmo_Chr08 : 1788398 .. 1793055 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGTAAGGGAAAGATTCATTTCGTAGGCTTGATATGATACATACAGTTCAGTTCTCTTCCAATCCTAATTTGAGGTCATAGTCGAAGTCTAAAATAGTCTCTTCATCTCTTCCTACTATAACTCATGATTAGAAATTTTATAAAGTTGTCACGTAAAAGTTTATTGTGACATAGAACCTTTTCGGGATCTTGAAAAGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTATGGTTGATTTACCATTTTAATTCTACCATGCATGTGTATCTTGGACGATAAAGCCTCTCATAACTAGTTCACAAAAATATTTGCAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGTGCCCAAACTTTTGATAAATGAAAAATATTGTAAAAGTTCGTGAGAAAAAAAAAATAATTAGAGGATTATTAAATAGGATATTTTTCATTGTATTTTAAAATTTTATTAGTGTATAAAGGACTCGATTGAAATATTATTTTAAAAATGTTCAAGACAATTTTAGGTTAAATTATAAATTTGGTCTCTCTAATTTAAAATTTAACAAAATTTTGAATAATTATTTTTGTTATTAATATATATTTAAGATATGAATGCATTTTTTAATCCGAAAAAAAAAAAACAACTAAAATATTTAAAATTTTATAAATGATTATGTATTAAAATGTATTTTTTATGTGGTTTAAAAAAAGGAAAATGTTTTTATTTTTGAATTTAGAATTTAAAAAAAGGTAAATAAATAAAGAAGCAATAAAGATTAATTTGTAATGTATTTTATTCCCAAATAAATAAGATTTTGGTAGATTCTTCGTGTTCTTCAAAATTTCCCCCAATTATCTTAGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTAACCGTTACATTCCTCTTCGATTTTTTCTCTTCTTCTCAATTTGAATTCGTCTGTTCTTCGCGCTCTTGATTATGGAAAATTATGTTTCAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTTTTTACGCTTTTTGTTTTCTGTTTACGATTTTATTTGCCTATCTATCTACGTTTCTACACTTATTACGTTTTTGTTATTTGAATTCTTGTGTCACTTGTTCTGAATTCACTGTCTGATTAGTGATTGTGAGTCAAACTATAGAAGTGTATTGAAGGCATTGATTTGGTCGTCATATCCGCATTTGATCTTTAGAGAAGTTGTAATTAAAAATTAACTTCTTGCGAGCTAAATGTTCCTGAAAAAATTGGTGATCTATTTCCATATCTCAGTGCGACAATGCACCACGGAATTCACTAATATGTATGGTGCTTAGAAGTAAGGATGGGCTAGACAAACGAAGACAAATTCCTTTTAGTAATGACTGGACCTAGAACTATAAATGCTTCAACAAATTCTAAACCTTTTTCTAATCCTTTCTCTTTCAGTATATTTATCTAATTTCTCAAATTAGATTGTGGTTCCAGAATTACACTGGTTTATGGTTTCTTTATTTATTGTGAATTTTGTAGATCAGTTATTTATTTCCTTGAGATGGAATGAGAATATTTTATTTTAGTTTTATTTATGAAATTTCTAGGCTTTAAGGATTTTTCGTTTATTGCATGTTTTATAGGCTGTCTTTGTCGCCATATCAGTGAGAGGAATTTCCTTTAGAAAGAAAAAGATTGCAGTTTGACACTAGTTGTAGTTAGAACAGTCAATGTTATGTGGTTTTATGTCCTCAAGCATCAAACTGTTACCTGAAATGCAGTCTAATTTGATATGGAAATGAAAAACTTTGAAGAAAGTGAGGCTTTTTCTGTGGACCCTCTACCTAAAAGAAGTGCTAATGGCAGAATTTAGAAGAAACTTCTTAAGAACAACAAATTGGAACTCTCTATTAAAGCTATAAGAACCACACAATTACAACATAACCCTCCAGCTGGGGTTGACTATATTATGAGAATAATATCTTTTACATGAATTTAATGATCGTTCTTGAAAGATTCATTGGCAAACCAATTACACTAAAGAGAAGTTTTTACTGCATTTACCCATAACAACCTAGCTTTATTTTTCAGCCTTACTCCCATTAGCAGCAGGAGAGTTCTACCTTTATCTTTTATCAAAAACCAAAGAATATTAAAGATTTTAAGAAACGTTCTCCCAACTTATTGCACCTGCAGAAAGTAATTTTTTTTTTTTTTTTAAAAAAAAAAATTGAACAAGAAACTGAAACTTTTTGTTGATATCATTATGTATAAAGTTACAATAAACTTAACCTTTTCTTTCATGGGTAGCTAAATTTTAATAGTTTACCCCATTAGCAAAAAACAGCAGTGTTGTATTCTTAATAAAAATTTAGGATAACTTCTTTGGCTTTTCTTCCATGTAATGTCAATACTTATATTCTGTAAAATATGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTGTATGGAGTGTCTATAATATTATTTCTCAGCAAATTTCCTTTTAAGTTTCTTGATTCTTGCGTGTTCTTGTCTTCTTAACACACTGAGGTTTATGTTAATTGAATTTTCGTTTACTAATGGGATCTATGAAATTTTCTCTTTCCTATGAAAATATAATTTAGGGAAAAATTACACTTAGATCTTTGGGGGGTGGTGTTCGTTTAATGTTCAGTATTTTTACGAAGTTTTTTTTTTTTTTCCGTCTGTTTATCTTATTGTTAGGTCATATTTTGGGTACTTGAGTAAAGTTTCCAAATACTTGTGGATGCAGTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGTATGTACTTTGACTCAACCTGTGGTGGAATTGGAAATTTAGGTTTTTTCTGGTTATTCTGGTCGACTCTCTCACATGTACTGTTTTTCATTTAATGAGCAAAGAAGTTGAGATTCTCCTATGCTTATGTATCTTGCATTAGATACTACAATTAAATTCTTCCTACTTACAGGACAAAGAACTTCTCCTTGGTGCCATAGTTTTTCCCGAGAATACTTTTAGTTATGCTATACGAAAAATCATTTTTCATAGTTTTTCCTTGGGAGGGCAGTCCTAGAAAGTAAGGGTTTTGGAAGCTGATTATTGAGAAGGTGGATTGTAGTGAGAAAGGTAAGAAGATTAAGGTTGACTTTATGTAATGCTGCTGCTCTTGAGAGCCTTCCTGCTTATTTTATGTCTGTTTACCTTTTACCGAAGGAAGTGAGAGATAAAGGGAAAGAAAAATTTAAATTTTCCTTCAAGATGAAATATTGGGCGAAAGTTGAATAATTTAGCCTCGTTTGATAACCATTTGGTTTTTGAAATTAAGCTTATTAGTTCAGATTTTTCTTTTGTTATCCACTCTCTATCAATGTTTTCAAAAATCAAACCAAGTTTTGAGAACTAGGGTTTAGGGTGCTGTTCCAATACTAAGAGATGTTAAAATGCAGAGAAGAGCATGATATGGCATTGATGTTTCACTGCATACGCTATAGAATATACTTTGTTTTCCATCTGGAAAATGTAAAATTTGTTATCTTCTACTTTAGCCCTTTTCAGATTTCATATTTTCTTTTTTCTTTTCCCTTCAATTTTCAGGCTGAAGAGCTTGCAGCTGGACGAGATGGTGAGCGATATCAGTAAGAATAAATACTTCTATTTTCTGGAATTAAAATTTTACAGTCTTCTTTTGTGAACCATGTTGAAGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAGTTAGTATTCTTCCAATTGTTTCCTTCGTTTGATGATGTTGCTTTAAATTTCTAACTTGAACACCATTTAACAATAAACACCCTCATATCTGTAACCTGAACTATTTTACTTCATAACAATGAGCTTTGAAGGTTTTTTTTTTAATCTTCAGTTAGTTTATGTGAAAATTTATGCTTTGGATATGCAGAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGAATGCTGTAAATCGAGCCTCTGATGGTGTCTTTGTCATCATCTACAGAGGTGAAAGACGAGCTCTCCGACTCCTCTTGTTCACCAAGTAACCAACCCGTCCTCACCGAGGCCAACGGGGGCAGGTATAGCTATTTATATCTGTGTTTGGCCACACTTGTTAGATGCTTTTATATTATAAATGTGTGAATAGAGTTCAAGTCGATAACATGAAGTACTACTAAATGTTTGACGATTGGAACTATGCTGCTTTGCTTACGAAGGAGTATTGCTAAACAAAATTTTAAATTGTCCATTTGGTC

mRNA sequence

ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGAATGCTGTAAATCGAGCCTCTGATGGTGTCTTTGTCATCATCTACAGAGGTGAAAGACGAGCTCTCCGACTCCTCTTGTTCACCAAGTAACCAACCCGTCCTCACCGAGGCCAACGGGGGCAGGTATAGCTATTTATATCTGTGTTTGGCCACACTTGTTAGATGCTTTTATATTATAAATGTGTGAATAGAGTTCAAGTCGATAACATGAAGTACTACTAAATGTTTGACGATTGGAACTATGCTGCTTTGCTTACGAAGGAGTATTGCTAAACAAAATTTTAAATTGTCCATTTGGTC

Coding sequence (CDS)

ATGTTCTTGAACAGTCTCGAAGAAAGCCACTGCGGGTGGTTGTCAACGTCGAGATTCCAAGCATATTGTGACATCTGCAACTCTGTATACTCAAACGTTCGCAAACTTCTTTGGAAGGTTCCCAAGTTTCACATCTATGAGACGAGATCGAGGCAGCTAGTCGAACAGCTCATTGCAGCCCCAATAAAAGGGGGCTTCTTCGAGGTTTCCCGCGACAATATGGAAGCTGAAGGTCAAAAGACTGCCACAAATCCGTCCGCAATGCTCGCTGGTCTTCTAACCAGGAGAGCCAAACTCCACGACGAGCTTCGGACTATCGAGAAGCAGGTCTATGACATGGAGACTAATTACCTACAGGATCCAAGCCAATGTGGGAATGTATTGAAAGGTTTTGAAGGATTCCTGTCTGCATCTAAGAGTTCTGCTCTTTTGAAGCGGTCTAGGAAATTTCAGCTTGATGATAGGCTCTTCTCGTTGTCTTCAGTTACCTCCCCTGCTGCTGAAGAGCTTGCAGCTGGACGAGATGATGGGAGATCCGACTTGGGTCCTGGCAGATCTAAAGGTGGAGGCATATATTCCAATGGACAAGGGAAACCAAAAAAGGGAAGACCGACCCCGAGGGATGCAAAGAGAATGCGACATTCAAGCGAGCAAGATTTCGACTATGACGATGATCCGGACTTGACATTGTGA

Homology

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BLAST of CmoCh08G002900 vs. Swiss-Prot
Match: EAF6_MOUSE (Chromatin modification-related protein MEAF6 OS=Mus musculus GN=Meaf6 PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

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BLAST of CmoCh08G002900 vs. Swiss-Prot
Match: EAF6_XENTR (Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis GN=meaf6 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESD 123

[Close]

BLAST of CmoCh08G002900 vs. Swiss-Prot
Match: EAF6_XENLA (Chromatin modification-related protein MEAF6 OS=Xenopus laevis GN=meaf6 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.0e-09
Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1


Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSN 195
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSSLAGVQD---QLIEKREPGSGTESD 123

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BLAST of CmoCh08G002900 vs. Swiss-Prot
Match: EAF6_CHICK (Chromatin modification-related protein MEAF6 OS=Gallus gallus GN=MEAF6 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.5e-09
Identity = 45/128 (35.16%), Postives = 72/128 (56.25%), Query Frame = 1


Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 21  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 80

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG--KPKKGRP 208
           +RKF+  +RLFS SSVTS AA    AG  D    L   R  G G  S+       ++  P
Sbjct: 81  NRKFKEAERLFSKSSVTSAAAVSALAGVQD---QLIEKREPGSGTESDTSPDFHNQENEP 140

Query: 209 TPRDAKRM 213
           +  DA+ +
Sbjct: 141 SQEDAEEL 145

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BLAST of CmoCh08G002900 vs. Swiss-Prot
Match: EAF6_BOVIN (Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6 PE=2 SV=2)

HSP 1 Score: 62.0 bits (149), Expect = 9.8e-09
Identity = 46/142 (32.39%), Postives = 73/142 (51.41%), Query Frame = 1


Query: 89  LAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSASKSSALL--KR 148
           LA L+ R+ +L + L  +E+Q+Y  E +YL+D    GN+++G++ +L+  K+S     +R
Sbjct: 19  LAELVKRKQELAETLANLERQIYAFEGSYLEDTQMYGNIIRGWDRYLTNQKNSNSKNDRR 78

Query: 149 SRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQGKPKKGRPTP 208
           +RKF+  +RLFS SSVTS AA    AG  D   +                 K + G  T 
Sbjct: 79  NRKFKEAERLFSKSSVTSAAAVSALAGVQDQLIE-----------------KREPGSGTE 138

Query: 209 RDAKRMRHSSEQDFDYDDDPDL 229
            D     H+ E + + +D  DL
Sbjct: 139 SDTSPDFHNQENEPNQEDPEDL 143

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BLAST of CmoCh08G002900 vs. TrEMBL
Match: A0A0A0K8N8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375790 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.8e-76
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           MEAEGQKTATNPSAMLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLSASKS+ALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYS 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRP PRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL 157

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BLAST of CmoCh08G002900 vs. TrEMBL
Match: I3SAI9_MEDTR (Chromatin modification MEAF6-like protein OS=Medicago truncatula GN=MTR_1g069925 PE=2 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.6e-66
Identity = 132/157 (84.08%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK+A NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKSAVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS++K++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSTKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGTIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPD+TL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARASSEQDFDYEDDPDMTL 157

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BLAST of CmoCh08G002900 vs. TrEMBL
Match: A0A0L9TXF6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g137500 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

[Close]

BLAST of CmoCh08G002900 vs. TrEMBL
Match: A0A0S3SR85_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G205600 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 2.1e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

[Close]

BLAST of CmoCh08G002900 vs. TrEMBL
Match: V7BH93_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G193100g PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 3.6e-66
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLT+
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTM 157

[Close]

BLAST of CmoCh08G002900 vs. TAIR10
Match: AT4G14385.1 (AT4G14385.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 184.5 bits (467), Expect = 7.4e-47
Identity = 100/156 (64.10%), Postives = 124/156 (79.49%), Query Frame = 1


Query: 78  GQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEGFLSA 137
           GQK++T+P AML  LL +R KL  ELR+IEKQVY++ET+YLQ+ S  GN LKGFEGFLS+
Sbjct: 4   GQKSSTDPGAMLTSLLNKREKLRQELRSIEKQVYELETSYLQESSHIGNALKGFEGFLSS 63

Query: 138 SKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYSNGQG 197
           SKS+A  KRSRKFQ +DR+FSLSSVTSPAAEEL  GR+DGR++LGPGRSKGG    + QG
Sbjct: 64  SKSTASAKRSRKFQPEDRVFSLSSVTSPAAEELGVGREDGRAELGPGRSKGG---LSTQG 123

Query: 198 KPKKGRP---TPRDAKRMRHSSEQDFDYDDDPDLTL 231
           KPKKGR      R+AKR R S+E D++ +DDPD+ +
Sbjct: 124 KPKKGRGQSIIAREAKRSRPSTEPDYEDEDDPDMNM 156

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BLAST of CmoCh08G002900 vs. NCBI nr
Match: gi|778727407|ref|XP_011659255.1| (PREDICTED: chromatin modification-related protein MEAF6 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 5.5e-76
Identity = 150/157 (95.54%), Postives = 153/157 (97.45%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           MEAEGQKTATNPSAMLAGLL+RRAKL DELR IEKQVYDMETNYLQDPSQCGNVLKGFEG
Sbjct: 1   MEAEGQKTATNPSAMLAGLLSRRAKLQDELRNIEKQVYDMETNYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLSASKS+ALLKRSRKFQL+DRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGG IYS
Sbjct: 61  FLSASKSTALLKRSRKFQLEDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGAIYS 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRP PRDAKRMRHSSEQDFDYDDDPDLTL
Sbjct: 121 NGQGKPKKGRPAPRDAKRMRHSSEQDFDYDDDPDLTL 157

[Close]

BLAST of CmoCh08G002900 vs. NCBI nr
Match: gi|502115003|ref|XP_004495102.1| (PREDICTED: chromatin modification-related protein MEAF6-like [Cicer arietinum])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 133/157 (84.71%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           M++EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MDSEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARVSSEQDFDYEDDPDLTL 157

[Close]

BLAST of CmoCh08G002900 vs. NCBI nr
Match: gi|1009173960|ref|XP_015868096.1| (PREDICTED: chromatin modification-related protein MEAF6 [Ziziphus jujuba])

HSP 1 Score: 261.5 bits (667), Expect = 1.3e-66
Identity = 133/157 (84.71%), Postives = 146/157 (92.99%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           M++E QK++ NPSAMLA LL RR KL +ELR IE+QVYDMET+YLQDPSQCGNVLKGFEG
Sbjct: 1   MDSEAQKSSLNPSAMLASLLGRRTKLQEELRNIERQVYDMETSYLQDPSQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SKS+ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSSKSTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGSIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGRPTPRDAKR+R SSEQDFDYDDDP+LTL
Sbjct: 121 NGQGKPKKGRPTPRDAKRIRPSSEQDFDYDDDPELTL 157

[Close]

BLAST of CmoCh08G002900 vs. NCBI nr
Match: gi|922402711|ref|XP_013468491.1| (chromatin modification MEAF6-like protein [Medicago truncatula])

HSP 1 Score: 260.8 bits (665), Expect = 2.3e-66
Identity = 132/157 (84.08%), Postives = 145/157 (92.36%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK+A NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKSAVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS++K++A LKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGG IY+
Sbjct: 61  FLSSTKNTAFLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDFGPGRSKGGTIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR  PRDAKR R SSEQDFDY+DDPD+TL
Sbjct: 121 NGQGKPKKGRGAPRDAKRARASSEQDFDYEDDPDMTL 157

[Close]

BLAST of CmoCh08G002900 vs. NCBI nr
Match: gi|951056423|ref|XP_014521759.1| (PREDICTED: chromatin modification-related protein MEAF6 isoform X1 [Vigna radiata var. radiata])

HSP 1 Score: 260.4 bits (664), Expect = 3.0e-66
Identity = 134/157 (85.35%), Postives = 144/157 (91.72%), Query Frame = 1


Query: 74  MEAEGQKTATNPSAMLAGLLTRRAKLHDELRTIEKQVYDMETNYLQDPSQCGNVLKGFEG 133
           ME+EGQK   NPSAMLA LL+RRAKLH+ELR IEKQVYDMET+YLQDP QCGNVLKGFEG
Sbjct: 1   MESEGQKGTVNPSAMLASLLSRRAKLHEELRNIEKQVYDMETSYLQDPGQCGNVLKGFEG 60

Query: 134 FLSASKSSALLKRSRKFQLDDRLFSLSSVTSPAAEELAAGRDDGRSDLGPGRSKGGGIYS 193
           FLS+SK++ALLKRSRKFQ +DRLFSLSSVTSPAAEELAAGRDDGRSD GPGRSKGGGIY+
Sbjct: 61  FLSSSKNTALLKRSRKFQPEDRLFSLSSVTSPAAEELAAGRDDGRSDYGPGRSKGGGIYA 120

Query: 194 NGQGKPKKGRPTPRDAKRMRHSSEQDFDYDDDPDLTL 231
           NGQGKPKKGR   RDAKR R SSEQDFDY+DDPDLTL
Sbjct: 121 NGQGKPKKGRGGSRDAKRARASSEQDFDYEDDPDLTL 157

The following BLAST results are available for this feature:

BLAST of CmoCh08G002900 vs. Swiss-Prot


Match Name	E-value	Identity	Description
EAF6_MOUSE	1.5e-09	38.89	Chromatin modification-related protein MEAF6 OS=Mus musculus GN=Meaf6 PE=1 SV=1	[more]
EAF6_XENTR	1.5e-09	38.89	Chromatin modification-related protein MEAF6 OS=Xenopus tropicalis GN=meaf6 PE=2...	[more]
EAF6_XENLA	2.0e-09	38.89	Chromatin modification-related protein MEAF6 OS=Xenopus laevis GN=meaf6 PE=2 SV=...	[more]
EAF6_CHICK	7.5e-09	35.16	Chromatin modification-related protein MEAF6 OS=Gallus gallus GN=MEAF6 PE=2 SV=1	[more]
EAF6_BOVIN	9.8e-09	32.39	Chromatin modification-related protein MEAF6 OS=Bos taurus GN=MEAF6 PE=2 SV=2	[more]

BLAST of CmoCh08G002900 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8N8_CUCSA	3.8e-76	95.54	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G375790 PE=4 SV=1	[more]
I3SAI9_MEDTR	1.6e-66	84.08	Chromatin modification MEAF6-like protein OS=Medicago truncatula GN=MTR_1g069925...	[more]
A0A0L9TXF6_PHAAN	2.1e-66	85.35	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g137500 PE=4 SV=1	[more]
A0A0S3SR85_PHAAN	2.1e-66	85.35	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G205600 PE=...	[more]
V7BH93_PHAVU	3.6e-66	84.71	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G193100g PE=4 SV=1	[more]

BLAST of CmoCh08G002900 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G14385.1	7.4e-47	64.10	FUNCTIONS IN: molecular_function unknown	[more]

BLAST of CmoCh08G002900 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778727407\|ref\|XP_011659255.1\|	5.5e-76	95.54	PREDICTED: chromatin modification-related protein MEAF6 [Cucumis sativus]	[more]
gi\|502115003\|ref\|XP_004495102.1\|	1.3e-66	84.71	PREDICTED: chromatin modification-related protein MEAF6-like [Cicer arietinum]	[more]
gi\|1009173960\|ref\|XP_015868096.1\|	1.3e-66	84.71	PREDICTED: chromatin modification-related protein MEAF6 [Ziziphus jujuba]	[more]
gi\|922402711\|ref\|XP_013468491.1\|	2.3e-66	84.08	chromatin modification MEAF6-like protein [Medicago truncatula]	[more]
gi\|951056423\|ref\|XP_014521759.1\|	3.0e-66	85.35	PREDICTED: chromatin modification-related protein MEAF6 isoform X1 [Vigna radiat...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015418	Eaf6

Vocabulary: **Cellular Component**
Term	Definition
GO:0000123	histone acetyltransferase complex

Vocabulary: **Biological Process**
Term	Definition
GO:0016573	histone acetylation

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0048573	photoperiodism, flowering
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:0005773	vacuole
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh08G002900.1	CmoCh08G002900.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015418	Chromatin modification-related protein Eaf6	PFAM	PF09340	NuA4	coord: 89..165 score: 1.9
None	No IPR available	unknown	Coil	Coil	coord: 89..109 scor
None	No IPR available	PANTHER	PTHR13476	UNCHARACTERIZED	coord: 13..230 score: 7.3E
None	No IPR available	PANTHER	PTHR13476:SF2	HISTONE ACETYLTRANSFERASE SUBUNIT NUA4-DOMAIN CONTAINING PROTEIN	coord: 13..230 score: 7.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh08G002900	Cucsa.388500	Cucumber (Gy14) v1	cgycmoB1078
CmoCh08G002900	CmaCh17G013480	Cucurbita maxima (Rimu)	cmacmoB366
CmoCh08G002900	Csa7G375790	Cucumber (Chinese Long) v2	cmocuB900
CmoCh08G002900	MELO3C015732	Melon (DHL92) v3.5.1	cmomeB809
CmoCh08G002900	CSPI07G15580	Wild cucumber (PI 183967)	cmocpiB913
CmoCh08G002900	Lsi02G022110	Bottle gourd (USVL1VR-Ls)	cmolsiB809
CmoCh08G002900	Cp4.1LG17g06110	Cucurbita pepo (Zucchini)	cmocpeB853
CmoCh08G002900	Cp4.1LG12g10380	Cucurbita pepo (Zucchini)	cmocpeB834
CmoCh08G002900	MELO3C015732.2	Melon (DHL92) v3.6.1	cmomedB912
CmoCh08G002900	CsaV3_7G027350	Cucumber (Chinese Long) v3	cmocucB1066
CmoCh08G002900	Cla97C09G170390	Watermelon (97103) v2	cmowmbB916
CmoCh08G002900	Bhi09G000942	Wax gourd	cmowgoB1131
CmoCh08G002900	CsGy7G014080	Cucumber (Gy14) v2	cgybcmoB955
CmoCh08G002900	Carg05116	Silver-seed gourd	carcmoB0119
CmoCh08G002900	Carg11522	Silver-seed gourd	carcmoB0022

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh08G002900	CmoCh17G013110	Cucurbita moschata (Rifu)	cmocmoB311

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh08G002900	Wax gourd	cmowgoB1128
CmoCh08G002900	Watermelon (97103) v1	cmowmB843
CmoCh08G002900	Cucurbita maxima (Rimu)	cmacmoB913
CmoCh08G002900	Watermelon (Charleston Gray)	cmowcgB785