CmoCh07G012350.1 (mRNA) Cucurbita moschata (Rifu)

Overview
NameCmoCh07G012350.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMADS-box transcription factor protein 1
LocationCmo_Chr07 : 6747714 .. 6753651 (+)
Sequence length836
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCATAAACACTTCATTCCTTTCCTTTGTCCACAAAAGGAAACCCTTTTATTTTCTTTCCAAGAATCTCGTTTTGGATATTGAATTCAACAGCCAAAACCCAGAAGAACAGCATCAAAATAAGGTAAATTTGCAAGAAACTATGTTTTTTGAGTTCATAGTTCGTCAGATTCTTAGGGTTTTTGTTTGAGATTTGTATAAATTCATCATTTTTTGATGTTTTTTTTATGATTTTTGGTTGATGGGTAGCTTTATTTTGATAGATCTTGTAAGAAAGTGATGATTTTTGATGCAAATTGAAGGGAAAATGGATGTGGGTCGAGTTTAATTTGGTGATTTTTGGGTGTTTTTTTGTGTGTGTGTTCATAGGTGGGAGGTTGAAAATAATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGGTTTTGTTCTCTCTCTCTCTAAGATCTTGTTTTTTTTTTCTTCATTTTTTGTTTGAATTTAGAGAGAGAAATGCTTGGTTTTTAGGGGAAATGGGTGAATGAACAAGGAATTTGATTGAAAAAAATAATGGGTTTTTGAGATTTTTAGAAATGGTGTAAGAATTTGATGAAAATATTGGTTTTGTTCCTTTTCTCTCTCTCTCAAATCTTTTTTTTTTTTTTTTCTTCATATTTGTTTGGGTTTAGAGAGAGAAATGCTTGATTTGTAGGGGAAATGGCTGAAGAACAAGGAATTTGATTGAAAAAAAGCAATGGGTTTTTGAGATTTTTAGAAATGGTGTAAGAATTTGATGAAAATTTTGGTCTTTTTTTTTAGGTTTTTTAGTTGAAATTTTGTTGATTTTCAAGAGACCCATGTAGAGTTCATCAAAGATGTAATTTTTATAATCTGAATTTTGTGATTTAATAATTTTGTTCTCATTGTTATTCTTAAAAAAACATGTGATTTTTGATGTCTTTCACGATTATCAAAGTGATTCTATTAGATATTGTCGTTTGATTGAATGTTTAAATTCAATTGGAAAATGTACTATCAAATTTACCTGCTAACCTATGATGTCGTACATTTTATCATGAAATATTGAAATTGTTGTCACACGAATCCGACCCCGTTATTATTTCAAACATCGGTGGATTATTTTTCACTCCGTCTATTGTTGACGTAAGAAAAGCTAAGAAACACGTGAAAATCGGTTTATTTACATAGAAATATTTGAGTAGACACTTCTAACTTCTTGATCGATGATATATATCTTAACCAGTTAAGTTATGTTGATATTGTCGATATTTTGTCGTATTTCATAAAGTTCATGTAGTTGTAACATTACTCAGTTTTGGTTTATTGATTTTACGATATGATTAGTCGAGTTAGTGAGACGCTTCACTTATATTTTAGATTAAAAGACTTCTTTTTTAAGCAAATCTCGAGAAGCCGAAACTTATGATAGCTTAACCGAGGAGCTAAGTAGTTTGACCGTATGAAAATAGTTGACAACTCCGATCCAAAATAGTAAGACGTTATCGATTGATAACCGTCGTAATATCGGTATTAGTATCGTTTAAGAATTGAAAGATGTCTTTTTTTTGGTCCTTTTATTATTGCATGAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTAACATCTTTATTTATTTATTTAAAAAGATGTTATTTTTTTAATAAAATTTTTAAGAATAGAACGACCCGTGAACGTTTATCGATGATAGAGTAAACCATGTGAAACAGCCTAAAGCGGCCTCTAACAAATATTGCCGCTTTGGCCCGTTACATATCAAAGCCAAACACTAAACAGTGTATCAGCTAAGTCCCAAGTGAGGTAGATTGTGATATCCCACGTCATTTGGTTGGGCGTGGAAACCTTTCTCTAGTAAACGCGTTTTAAACTCTTGTGGGAAAGTACAAAGAGGACAATATCTGCTAGCGATGGAGGACTTGAGCTACTGCAAACTTCGGTTCTTTTTTTTGAATGGGATTCCTTCGATTTTTACTCGTTGCTAATTCTTTCTATCATGAATAGCTAACACCCGATAATTTCGTGCTAACCTGAGCATAACTCAACTGATTAAGATGTTATATCTCGAGCAAATTTCCACCCACGTGTTCGTACTACGATTTTGTTTAATATCATTAATGTTTTTGTAGCTATGCTCAATCATTTTTAGGGTTTGTTTTGCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGTAAGATTTCTCAGCCATTATCAACTGCTAAAATCATTATAAAACTACAGAAATAGTTATAAATTGCAGCTTTTGTTTGCCAGTTTTGTAAAGCATATGTCCCTATTGCTTAGACATGGTTTGAAATACTTATGAGTTTGCAAATGATATCTTCTTGTTGGCAAGCTTTCATGGAATTGATATCATCCCGAGCCGAGCGAATGCAACAGCTCAAGCCCACGGCTAGTAAATATTGTCGTCTTTGAGTTTTTTCTTTTGGGCTTTCCCTCAAGGTTTTAAAACGCGTATGTTAGGGAGACGTTTCCACATCCTTATAAGGAATGATTCGTTTCTCTCTTCAATCAATGTGGGATCTTACAAAATTTCGACCTCTTTGACTACAAGACTAGATATTTAAAACTGAAGAATCAGAAGTAGAGTTTTTTTGTTCAGAAAATATATAGGAGTCGAGATTCGAACCTTCAACTTCAACTTAGTAGAATTGATATCATGGAGAGCGAATGCAAGTCTTCTAAAATTTGTGACAGCTCAAATCCACCGCTAGTAAATATTGTCCTATTTAGCTTTCCCTTTCGAGTTTCCCTTAAGATTTTAAAACACGTATGTCAGGGAGAGGTTTCCATACCCTTATAAAGAATGTTTCGTTCCCTTCTCTAACCGATGTGGGATCTCACAAAATATCTTCGACCTCTTCGATTACAAAACTAGATACTTAAAAACGAAGAATCGAAAATAGGGTTTTTTTGTTAAGCAAATGTATAGGAGTTGAGAATCAAACCGTAAACTTAAACAACAGAAATATGTGTTATTTTCGTGATTTGACCTCCTTTGTTAACTCGTTCGTACTCCAATGATAATTAACACAAGTCGGGGTGTATTTGGCATGAAAAATAGCCTTCGTAGGGTCCTTTTTTGTTCAAATTTTCACGAGAAACTTTGTAACGGAGTTTAAGGACCAAAATAAAATAGTTACTCAAACGATTCGTTCGAAGAGTTTTGGACCCAAAAATGAACTCATTTGTGTTAAACTATGAACAAGGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGTTCGTTCATTAAACATGTAATCATTGAATTGTTATCCTTAAAATCTGCTAACTTGGATTTTGTTTGTCTTCCTTGTAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGTCACAACACTTTTATCTCTATATTTTGAGTGATATTTAGAAATTATGTTCTAGCTTGGACCTTTTTATCGGTTGAACTATGCTCTAATTTACTACTCTCATTCGGGCTAGGAAGTAAGTCCCACAATCCAAAACGTGCCATTTAGCAAGCATGTAGTAACGACCCAAGTCCACTGCTAGTAGATGTTGTCCTCTTCGGGGTTTCCCTCAAGGTTTTTAAAACGTGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAATGATGCTTCGTTCTCCTCCCCAACCGATACTAAATGGCACGTTTACACACCGACTTGCCCTCTGGGGGCCTAGCGCCCTCGTTAGCACTCGTTCCCTTCTCTAATCATTGAGGACTACCGGTGTCTGGCTTTGATACCATTCGTAACGGCCAAGCCCACCGTTAGCAGATCATTGTGAGATCCCATATCGGTTGGGAAGGAGAACAAAACATCCTTTATAAGGGTGTGGAAACCTCTCCCTAACAGACAGCGTTTTAAAAATCTTGAGATGAAGGCTAAAAGGGAAAACCCAACGAGAACAATATTTGCTAGCGGTGGGTTTGGGTTGTTACACATGTAGACCCAATACATCCTCTCGTGCCTTTCTCCTATCTCAAAAGGGTCTAACCGGGCATTGAAATAACGGGAGAAAGAAACAAACCGATGGAACGACAGCTTCCATTGTCTTTCTCTATACTGAAATGACAACGGTTACGATCACATAGGATCTCCACCCTCAATACATCCTCTCGTGCCTTGCTCCTATCTCAAAAGGGTCGAACCGGGCATTGAAATAACGGTAGAAAGAAACGAACCTATGGAATGACTTCCATCGTCTTTCTCTACACCAAAATCACATAGGGTCCCCTCCGTTTCATCCTTTTTAAGACGTAGTCCGTCTTTCGAGCTAATACTATAAAAAAAAAATCATTCTTTTGGTTATTTGTGAGATACCCTTTATCTTAAACGTAGTAAAAAGGCAAACCCACTTCATATTTTAACCTAAATATTGCAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGGTAAGAATTTCTTTGTAAGTGAAAGTGAAAAGGTAAAAACCATCAATTAATGGCTAAAGGCTTTTGGTTTTAATGGCAGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGGTTAGTAATTTTCTTACATTTACTGTACATTACCCTTTTGAATCCCTTCTATTTTTCATCTTTTTACTTTGAGGGTGTTTTTTTTTTGTGAAGATTTGCGTGTCATACTGAACGGTAACCGCTAAGTCCATACTGAACGGTAACCGCTAAGTCCACTGCTAGTAAATATTGTTCTCTTTGAACTTTCCCTCAGGGTTTTAAAATGTGTCTGGTAGGGAGAGGTTTTCACGCCCTATAAATAATGTTTCGTTCGGCTCTCCAACCGATGTGGGATCTCACGTGAACCTTTCATTTTAGTTCTTAAAAGTCTAGAAAGGAAGGTATAGATAAACAACTTTCAAAGGAAAACCACTTAAACTTTTCAATTCAACTCCCGAACAACTCATTAAACTTTACCGACATGTTTGTTAGGAAGGGGTTTCTATACCCTTATAAGGAATATTTTGTTTCTTTTCCAACTGATGTGGGATCTCCTCGACTATATCCTCGACTTATTCACCTTGACCTGTTACAGAGCTCGAAAAACAACGGTTCGAGTTTCAGAAGTTAGAAAATGGTCTTTACTATGATATTATGTTTACAAGAATAGTAAAACGTGTTTGTTAGGGAGAGATTTCTATATACTTATAAGGAATGTTTCGTTTCTCTCTTTAACTGAGGTGGGATCTCACATGAACATAGTTCAATCAGTTAAAATCATCCAAACGTGCTCGTACTATACATATCCTCGACTTAGAGGTTCAAAAGTTCAAATATCTTCACCGTGACCTGTTACTGAGCTCGAAAAACAACGGTTCGAGTTTCTTTAGTATGATATTATGTTTACGAGAATAGTGATGAGTATATGTTTGTTTATGCAGTCTGTGAAGGCACAAAGTAAGCATCTCTTCTTTGCAGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA

mRNA sequence

CCCATAAACACTTCATTCCTTTCCTTTGTCCACAAAAGGAAACCCTTTTATTTTCTTTCCAAGAATCTCGTTTTGGATATTGAATTCAACAGCCAAAACCCAGAAGAACAGCATCAAAATAAGGTGGGAGGTTGAAAATAATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA

Coding sequence (CDS)

ATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA
Homology
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BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-45
Identity = 116/242 (47.93%), Postives = 155/242 (64.05%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQIKKIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLFDYSSS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+++L R ++  +      QP  +   VE   Y++LS+E + K+  L+ MRGE+LQ L 
Sbjct: 61  SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTL------ 180
           IEEL+QLE+ LE GL+RVIE K DK ++EI   ++K   LM+EN++LR  ++ +      
Sbjct: 121 IEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNN 180

Query: 181 -NHREQEQAVI--------------GGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGIL 219
            N+  +E  V+               G S  S +N  NS   P P   D  D SLKLG+ 
Sbjct: 181 NNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPP-PQDDDSSDTSLKLGLA 240

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BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 115/236 (48.73%), Postives = 149/236 (63.14%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+E+L RHN+  +      QP  +   VE   +A++S+E A K+  L+ MRGE+LQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----------- 180
           IEEL+QLEK LE GL RVIETK DK + EI   ++K   LM EN+RLR            
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 -GMVTLNH------REQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            GM   N+       E E A +      S+S T   +S+  P   +  D SL+LG+
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

[Close]
BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 106/219 (48.40%), Postives = 153/219 (69.86%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
            M+++L R+++     +    PPS   ++E    ++LS+E   KTK+L+ +RGEDL  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EEL++LEKLLE GL+RV E K +  + +I + +++ + L+ EN+RLR+ + TL   E+ 
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL---ERA 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNS-HDFDDISLKLGI 216
           +      +L ++S TTN SS  +     D  D SLKLG+
Sbjct: 181 KLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-40
Identity = 101/222 (45.50%), Postives = 147/222 (66.22%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R++ +IK+I++ AARQVTFSKRRRGLFKKA EL+ LCDAD+ALIVFS++GKL  ++SS
Sbjct: 1   MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQP--PSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGI 120
           SM E++ ++N         +QP     +E   YA L+E+ A  +  L+ MRGE+L+ L I
Sbjct: 61  SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120

Query: 121 EELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQ-- 180
           +EL+QLEK LE GL+RV+ TKD +F+++I   + K + L +EN +LRN +  ++  E+  
Sbjct: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180

Query: 181 ---EQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
              E  V  G S  S     +S SS + ++ D  D+SLKLG+
Sbjct: 181 VDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGL 222

[Close]
BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 9.5e-36
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1 

Query: 3   RQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSM 62
           R++I I++IDN+AARQVTFSKRRRGLFKKA EL+ LCDA++ L+VFSA+GKLF ++S+SM
Sbjct: 22  RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81

Query: 63  QELLRRHNMIPEVNSFGQQPPSQV-----EKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 122
           ++++ R+N      +  +  PSQ+     +    A+L EE A  +  L+ MRGE+L  L 
Sbjct: 82  EQIIDRYN--SHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLN 141

Query: 123 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 182
           +E+L++LEK LE GL  V++TK  K L EI   + K   L++EN RL+  +        E
Sbjct: 142 VEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRME 201

Query: 183 QAVIGGSS-------LGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +   G  S         S+S T  S   P P++    D SLKLG+
Sbjct: 202 EMQPGPDSEIVYEEGQSSESVTNASYPRPPPDNDYSSDTSLKLGL 244

[Close]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match: A0A061E173_THECC (MIKC mads-box transcription factor, putative isoform 1 OS=Theobroma cacao GN=TCM_007378 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-50
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+     + +   +
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQ---QIGNSSMD 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           QA++      S+S      S+  P  ++  DISL+LG+      FPN
Sbjct: 181 QAIVPQQGQPSESAARVWISADPPQGYNNSDISLRLGL-----PFPN 219

[Close]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match: A0A0A0KW94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182260 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-50
Identity = 123/172 (71.51%), Postives = 143/172 (83.14%), Query Frame = 1 

Query: 53  KLFDYSSSSMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGED 112
           K  D   SSM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+
Sbjct: 2   KTIDEKISSMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEE 61

Query: 113 LQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTL 172
           LQ+LGIEELKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL
Sbjct: 62  LQELGIEELKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETL 121

Query: 173 NHR----EQEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            +R    E+E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 122 INRDDQQEEEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 172

[Close]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match: A0A061E2Z6_THECC (MIKC mads-box transcription factor, putative isoform 2 OS=Theobroma cacao GN=TCM_007378 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-48
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTL---NHR 177
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+   + L   NH+
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQQQLYLSKANHQ 180

[Close]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match: H6BFA0_ACTCH (SVP4 OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.9e-47
Identity = 122/227 (53.74%), Postives = 154/227 (67.84%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M RQ+IQIKKIDN+ ARQVTFSKRRRGLFKKA EL+TLCDA+IALIVFSA+G+LF+YSSS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM +++ RHN+  + N   Q  PS   Q+E   YA L  E   +T+EL+ +RGE+L  LG
Sbjct: 61  SMNQVIERHNLQGD-NLVQQNQPSLELQLENSTYAMLCNEVEERTRELRQLRGEELHGLG 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEK LE GL R+++TKD++F KEI A K KE  L +EN  L+  +  +N    E
Sbjct: 121 VEELKNLEKSLEGGLGRILKTKDERFEKEITALKRKETRLREENLWLQQRLQIVNASTPE 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           Q    G S  S+S T N SS+  P  +D  D SLKL +      FPN
Sbjct: 181 Q----GQS--SESITNNGSSTAPPQDYDSSDTSLKLSL-----PFPN 215

[Close]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match: H6BF96_ACTDE (SVP4 OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.4e-47
Identity = 125/228 (54.82%), Postives = 155/228 (67.98%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M RQ+IQIKKIDN+ ARQVTFSKRRRGLFKKA EL+TLCDA+IALIVFSA+G+LF+YSSS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQ-QPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDL 120
           SM +++ RHN+  + N+  Q   PS   Q+E   YA L  E   KT+EL+ +RGE+L  L
Sbjct: 61  SMNQVIERHNL--QGNNLVQLNQPSLELQLENSTYAMLCNEVEEKTRELRQLRGEELHGL 120

Query: 121 GIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQ 180
           G+EELK+LEK LE GL RV++TKD+KF KEI A K KE  L +EN  L+  +   N    
Sbjct: 121 GVEELKKLEKSLEEGLGRVLKTKDEKFEKEITALKRKETRLREENLWLQQRLQIANASTP 180

Query: 181 EQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           EQ    G S  S+S T N SS+  P  +D  D SLKL +      FPN
Sbjct: 181 EQ----GQS--SESITNNGSSTAPPQDYDSSDTSLKLSL-----PFPN 215

[Close]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match: AT2G22540.1 (AT2G22540.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 181.4 bits (459), Expect = 6.3e-46
Identity = 115/236 (48.73%), Postives = 149/236 (63.14%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+E+L RHN+  +      QP  +   VE   +A++S+E A K+  L+ MRGE+LQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----------- 180
           IEEL+QLEK LE GL RVIETK DK + EI   ++K   LM EN+RLR            
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 -GMVTLNH------REQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            GM   N+       E E A +      S+S T   +S+  P   +  D SL+LG+
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

[Close]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match: AT4G24540.1 (AT4G24540.1 AGAMOUS-like 24)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-42
Identity = 106/219 (48.40%), Postives = 153/219 (69.86%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
            M+++L R+++     +    PPS   ++E    ++LS+E   KTK+L+ +RGEDL  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EEL++LEKLLE GL+RV E K +  + +I + +++ + L+ EN+RLR+ + TL   E+ 
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL---ERA 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNS-HDFDDISLKLGI 216
           +      +L ++S TTN SS  +     D  D SLKLG+
Sbjct: 181 KLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match: AT4G37940.1 (AT4G37940.1 AGAMOUS-like 21)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI I++ID+  +RQVTFSKRR+GL KKA ELA LCDA++ LI+FS++GKL+D++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVE--KDAYAKLSEEFAAKTKELKHMRGEDLQDLGI 120
           SM+ ++ R+N           P S+V+  +   A L +E  A  +  + M GE L  L +
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 EELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 178
            EL  LE  +EI L  +   K+    +EI    +K  L+ +EN  L   +  ++    E
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVE 179

[Close]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match: AT5G51870.3 (AT5G51870.3 AGAMOUS-like 71)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 68/171 (39.77%), Postives = 102/171 (59.65%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI+IKKI+N+ +RQVTFSKRR GLFKKAHEL+ LCDA +A IVFS SG+L +YSSS
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKEL-------KHMRGEDL 120
            M++++ R+          ++P  QVE+    +L  E     K++       + + G+ L
Sbjct: 61  QMEKIIDRYGKFSNAFYVAERP--QVER-YLQELKMEIDRMVKKIDLLEVHHRKLLGQGL 120

Query: 121 QDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRL 165
               + EL++++  +E  L  V   K + +  ++   KEKE  L+ E +RL
Sbjct: 121 DSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRL 168

[Close]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18)

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 79/234 (33.76%), Postives = 125/234 (53.42%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R +I+IKKI+NI +RQVTFSKRR GL KKA EL+ LCDA++ALI+FS++GK++D+SS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQV------EKDAYAKLSEEFAAKTKEL----KHMRG 120
            M+++L R+          QQ   Q+        +A  +  +    + + L    + ++G
Sbjct: 61  CMEQILSRYGYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLKG 120

Query: 121 EDLQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLR----- 180
           ++L+ +   +L  LE  L   L+ V + K    L +I   + +E   ++ENQ LR     
Sbjct: 121 KELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRKQVEM 180

Query: 181 ----NGMVTLNHREQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
               +G   LN R Q+      SS  +   +++S    N N     D SL+LG+
Sbjct: 181 LGRGSGPKVLNERPQD------SSPEADPESSSSEEDENDNEEHHSDTSLQLGL 228

[Close]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match: gi|659108938|ref|XP_008454463.1| (PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 4.2e-84
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKI+IKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEE 120
           SM +LLRRHNM+PE+N+  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEE
Sbjct: 61  SMLDLLRRHNMLPELNNISQLPPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----GMVTLNHREQ 180
           LK+LEKLLE GLNRVIETKD+KFLKEIG  KEKE LLMKENQRLRN     +V  + +E+
Sbjct: 121 LKELEKLLENGLNRVIETKDEKFLKEIGTVKEKETLLMKENQRLRNKLMETLVDRDEQEE 180

Query: 181 EQA--VIGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           E+A  VIGG+S+G  SKSNT+NSSSS NPNS D+DD+SLKLG+
Sbjct: 181 EEAVVVIGGNSVGSKSKSNTSNSSSSQNPNSQDYDDVSLKLGL 223

[Close]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match: gi|778692373|ref|XP_011653451.1| (PREDICTED: MADS-box protein JOINTLESS-like [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 5.1e-82
Identity = 179/224 (79.91%), Postives = 200/224 (89.29%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKI+IKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEE 120
           SM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEE
Sbjct: 61  SMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTLNHR----E 180
           LKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL +R    E
Sbjct: 121 LKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETLINRDDQQE 180

Query: 181 QEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 181 EEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 223

[Close]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match: gi|659108940|ref|XP_008454464.1| (PREDICTED: MADS-box protein SVP-like isoform X2 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-50
Identity = 115/162 (70.99%), Postives = 139/162 (85.80%), Query Frame = 1 

Query: 62  MQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEEL 121
           M +LLRRHNM+PE+N+  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEEL
Sbjct: 1   MLDLLRRHNMLPELNNISQLPPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEEL 60

Query: 122 KQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----GMVTLNHREQE 181
           K+LEKLLE GLNRVIETKD+KFLKEIG  KEKE LLMKENQRLRN     +V  + +E+E
Sbjct: 61  KELEKLLENGLNRVIETKDEKFLKEIGTVKEKETLLMKENQRLRNKLMETLVDRDEQEEE 120

Query: 182 QA--VIGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +A  VIGG+S+G  SKSNT+NSSSS NPNS D+DD+SLKLG+
Sbjct: 121 EAVVVIGGNSVGSKSKSNTSNSSSSQNPNSQDYDDVSLKLGL 162

[Close]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match: gi|590688071|ref|XP_007042844.1| (MIKC mads-box transcription factor, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 206.8 bits (525), Expect = 4.0e-50
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = 1 

Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+     + +   +
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQ---QIGNSSMD 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           QA++      S+S      S+  P  ++  DISL+LG+      FPN
Sbjct: 181 QAIVPQQGQPSESAARVWISADPPQGYNNSDISLRLGL-----PFPN 219

[Close]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match: gi|700198737|gb|KGN53895.1| (hypothetical protein Csa_4G182260 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 6.7e-50
Identity = 123/172 (71.51%), Postives = 143/172 (83.14%), Query Frame = 1 

Query: 53  KLFDYSSSSMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGED 112
           K  D   SSM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+
Sbjct: 2   KTIDEKISSMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEE 61

Query: 113 LQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTL 172
           LQ+LGIEELKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL
Sbjct: 62  LQELGIEELKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETL 121

Query: 173 NHR----EQEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            +R    E+E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 122 INRDDQQEEEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 172

The following BLAST results are available for this feature:
BLAST of CmoCh07G012350.1 vs. Swiss-Prot
Match NameE-valueIdentityDescription
JOIN_SOLLC2.9e-4547.93MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1[more]
SVP_ARATH1.1e-4448.73MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1[more]
AGL24_ARATH1.3e-4048.40MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1[more]
MAD22_ORYSJ4.8e-4045.50MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 ... [more]
MAD47_ORYSJ9.5e-3642.67MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 ... [more]
BLAST of CmoCh07G012350.1 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A061E173_THECC2.8e-5054.19MIKC mads-box transcription factor, putative isoform 1 OS=Theobroma cacao GN=TCM... [more]
A0A0A0KW94_CUCSA4.7e-5071.51Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182260 PE=4 SV=1[more]
A0A061E2Z6_THECC2.6e-4861.54MIKC mads-box transcription factor, putative isoform 2 OS=Theobroma cacao GN=TCM... [more]
H6BFA0_ACTCH4.9e-4753.74SVP4 OS=Actinidia chinensis PE=2 SV=1[more]
H6BF96_ACTDE6.4e-4754.82SVP4 OS=Actinidia deliciosa PE=2 SV=1[more]
BLAST of CmoCh07G012350.1 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G22540.16.3e-4648.73 K-box region and MADS-box transcription factor family protein [more]
AT4G24540.17.2e-4248.40 AGAMOUS-like 24[more]
AT4G37940.12.3e-2439.11 AGAMOUS-like 21[more]
AT5G51870.33.0e-2439.77 AGAMOUS-like 71[more]
AT3G57390.15.2e-2433.76 AGAMOUS-like 18[more]
BLAST of CmoCh07G012350.1 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659108938|ref|XP_008454463.1|4.2e-8478.48PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Cucumis melo][more]
gi|778692373|ref|XP_011653451.1|5.1e-8279.91PREDICTED: MADS-box protein JOINTLESS-like [Cucumis sativus][more]
gi|659108940|ref|XP_008454464.1|1.8e-5070.99PREDICTED: MADS-box protein SVP-like isoform X2 [Cucumis melo][more]
gi|590688071|ref|XP_007042844.1|4.0e-5054.19MIKC mads-box transcription factor, putative isoform 1 [Theobroma cacao][more]
gi|700198737|gb|KGN53895.1|6.7e-5071.51hypothetical protein Csa_4G182260 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002100TF_MADSbox
IPR002487TF_Kbox
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003700transcription factor activity, sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh07G012350CmoCh07G012350gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh07G012350.1CmoCh07G012350.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh07G012350.1.exon.1CmoCh07G012350.1.exon.1exon
CmoCh07G012350.1.exon.2CmoCh07G012350.1.exon.2exon
CmoCh07G012350.1.exon.3CmoCh07G012350.1.exon.3exon
CmoCh07G012350.1.exon.4CmoCh07G012350.1.exon.4exon
CmoCh07G012350.1.exon.5CmoCh07G012350.1.exon.5exon
CmoCh07G012350.1.exon.6CmoCh07G012350.1.exon.6exon
CmoCh07G012350.1.exon.7CmoCh07G012350.1.exon.7exon
CmoCh07G012350.1.exon.8CmoCh07G012350.1.exon.8exon
CmoCh07G012350.1.exon.9CmoCh07G012350.1.exon.9exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh07G012350.1.five_prime_UTR.1CmoCh07G012350.1.five_prime_UTR.1five_prime_UTR
CmoCh07G012350.1.five_prime_UTR.2CmoCh07G012350.1.five_prime_UTR.2five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh07G012350.1.CDS.1CmoCh07G012350.1.CDS.1CDS
CmoCh07G012350.1.CDS.2CmoCh07G012350.1.CDS.2CDS
CmoCh07G012350.1.CDS.3CmoCh07G012350.1.CDS.3CDS
CmoCh07G012350.1.CDS.4CmoCh07G012350.1.CDS.4CDS
CmoCh07G012350.1.CDS.5CmoCh07G012350.1.CDS.5CDS
CmoCh07G012350.1.CDS.6CmoCh07G012350.1.CDS.6CDS
CmoCh07G012350.1.CDS.7CmoCh07G012350.1.CDS.7CDS
CmoCh07G012350.1.CDS.8CmoCh07G012350.1.CDS.8CDS


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 23..38
score: 1.3E-25coord: 38..59
score: 1.3E-25coord: 3..23
score: 1.3
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 10..57
score: 3.2
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 1..60
score: 6.4
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 3..57
scor
IPR002100Transcription factor, MADS-boxPROFILEPS50066MADS_BOX_2coord: 1..61
score: 28
IPR002100Transcription factor, MADS-boxunknownSSF55455SRF-likecoord: 2..76
score: 9.16
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 85..166
score: 2.9
IPR002487Transcription factor, K-boxPROFILEPS51297K_BOXcoord: 84..175
score: 11
NoneNo IPR availableunknownCoilCoilcoord: 91..111
scor
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 2..171
score: 5.2
NoneNo IPR availablePANTHERPTHR11945:SF179MADS-BOX PROTEIN SVPcoord: 2..171
score: 5.2