CmoCh07G012350 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G012350
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	MADS-box transcription factor protein 1
Location	Cmo_Chr07 : 6747714 .. 6753651 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCATAAACACTTCATTCCTTTCCTTTGTCCACAAAAGGAAACCCTTTTATTTTCTTTCCAAGAATCTCGTTTTGGATATTGAATTCAACAGCCAAAACCCAGAAGAACAGCATCAAAATAAGGTAAATTTGCAAGAAACTATGTTTTTTGAGTTCATAGTTCGTCAGATTCTTAGGGTTTTTGTTTGAGATTTGTATAAATTCATCATTTTTTGATGTTTTTTTTATGATTTTTGGTTGATGGGTAGCTTTATTTTGATAGATCTTGTAAGAAAGTGATGATTTTTGATGCAAATTGAAGGGAAAATGGATGTGGGTCGAGTTTAATTTGGTGATTTTTGGGTGTTTTTTTGTGTGTGTGTTCATAGGTGGGAGGTTGAAAATAATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGGTTTTGTTCTCTCTCTCTCTAAGATCTTGTTTTTTTTTTCTTCATTTTTTGTTTGAATTTAGAGAGAGAAATGCTTGGTTTTTAGGGGAAATGGGTGAATGAACAAGGAATTTGATTGAAAAAAATAATGGGTTTTTGAGATTTTTAGAAATGGTGTAAGAATTTGATGAAAATATTGGTTTTGTTCCTTTTCTCTCTCTCTCAAATCTTTTTTTTTTTTTTTTCTTCATATTTGTTTGGGTTTAGAGAGAGAAATGCTTGATTTGTAGGGGAAATGGCTGAAGAACAAGGAATTTGATTGAAAAAAAGCAATGGGTTTTTGAGATTTTTAGAAATGGTGTAAGAATTTGATGAAAATTTTGGTCTTTTTTTTTAGGTTTTTTAGTTGAAATTTTGTTGATTTTCAAGAGACCCATGTAGAGTTCATCAAAGATGTAATTTTTATAATCTGAATTTTGTGATTTAATAATTTTGTTCTCATTGTTATTCTTAAAAAAACATGTGATTTTTGATGTCTTTCACGATTATCAAAGTGATTCTATTAGATATTGTCGTTTGATTGAATGTTTAAATTCAATTGGAAAATGTACTATCAAATTTACCTGCTAACCTATGATGTCGTACATTTTATCATGAAATATTGAAATTGTTGTCACACGAATCCGACCCCGTTATTATTTCAAACATCGGTGGATTATTTTTCACTCCGTCTATTGTTGACGTAAGAAAAGCTAAGAAACACGTGAAAATCGGTTTATTTACATAGAAATATTTGAGTAGACACTTCTAACTTCTTGATCGATGATATATATCTTAACCAGTTAAGTTATGTTGATATTGTCGATATTTTGTCGTATTTCATAAAGTTCATGTAGTTGTAACATTACTCAGTTTTGGTTTATTGATTTTACGATATGATTAGTCGAGTTAGTGAGACGCTTCACTTATATTTTAGATTAAAAGACTTCTTTTTTAAGCAAATCTCGAGAAGCCGAAACTTATGATAGCTTAACCGAGGAGCTAAGTAGTTTGACCGTATGAAAATAGTTGACAACTCCGATCCAAAATAGTAAGACGTTATCGATTGATAACCGTCGTAATATCGGTATTAGTATCGTTTAAGAATTGAAAGATGTCTTTTTTTTGGTCCTTTTATTATTGCATGAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTAACATCTTTATTTATTTATTTAAAAAGATGTTATTTTTTTAATAAAATTTTTAAGAATAGAACGACCCGTGAACGTTTATCGATGATAGAGTAAACCATGTGAAACAGCCTAAAGCGGCCTCTAACAAATATTGCCGCTTTGGCCCGTTACATATCAAAGCCAAACACTAAACAGTGTATCAGCTAAGTCCCAAGTGAGGTAGATTGTGATATCCCACGTCATTTGGTTGGGCGTGGAAACCTTTCTCTAGTAAACGCGTTTTAAACTCTTGTGGGAAAGTACAAAGAGGACAATATCTGCTAGCGATGGAGGACTTGAGCTACTGCAAACTTCGGTTCTTTTTTTTGAATGGGATTCCTTCGATTTTTACTCGTTGCTAATTCTTTCTATCATGAATAGCTAACACCCGATAATTTCGTGCTAACCTGAGCATAACTCAACTGATTAAGATGTTATATCTCGAGCAAATTTCCACCCACGTGTTCGTACTACGATTTTGTTTAATATCATTAATGTTTTTGTAGCTATGCTCAATCATTTTTAGGGTTTGTTTTGCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGTAAGATTTCTCAGCCATTATCAACTGCTAAAATCATTATAAAACTACAGAAATAGTTATAAATTGCAGCTTTTGTTTGCCAGTTTTGTAAAGCATATGTCCCTATTGCTTAGACATGGTTTGAAATACTTATGAGTTTGCAAATGATATCTTCTTGTTGGCAAGCTTTCATGGAATTGATATCATCCCGAGCCGAGCGAATGCAACAGCTCAAGCCCACGGCTAGTAAATATTGTCGTCTTTGAGTTTTTTCTTTTGGGCTTTCCCTCAAGGTTTTAAAACGCGTATGTTAGGGAGACGTTTCCACATCCTTATAAGGAATGATTCGTTTCTCTCTTCAATCAATGTGGGATCTTACAAAATTTCGACCTCTTTGACTACAAGACTAGATATTTAAAACTGAAGAATCAGAAGTAGAGTTTTTTTGTTCAGAAAATATATAGGAGTCGAGATTCGAACCTTCAACTTCAACTTAGTAGAATTGATATCATGGAGAGCGAATGCAAGTCTTCTAAAATTTGTGACAGCTCAAATCCACCGCTAGTAAATATTGTCCTATTTAGCTTTCCCTTTCGAGTTTCCCTTAAGATTTTAAAACACGTATGTCAGGGAGAGGTTTCCATACCCTTATAAAGAATGTTTCGTTCCCTTCTCTAACCGATGTGGGATCTCACAAAATATCTTCGACCTCTTCGATTACAAAACTAGATACTTAAAAACGAAGAATCGAAAATAGGGTTTTTTTGTTAAGCAAATGTATAGGAGTTGAGAATCAAACCGTAAACTTAAACAACAGAAATATGTGTTATTTTCGTGATTTGACCTCCTTTGTTAACTCGTTCGTACTCCAATGATAATTAACACAAGTCGGGGTGTATTTGGCATGAAAAATAGCCTTCGTAGGGTCCTTTTTTGTTCAAATTTTCACGAGAAACTTTGTAACGGAGTTTAAGGACCAAAATAAAATAGTTACTCAAACGATTCGTTCGAAGAGTTTTGGACCCAAAAATGAACTCATTTGTGTTAAACTATGAACAAGGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGTTCGTTCATTAAACATGTAATCATTGAATTGTTATCCTTAAAATCTGCTAACTTGGATTTTGTTTGTCTTCCTTGTAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGTCACAACACTTTTATCTCTATATTTTGAGTGATATTTAGAAATTATGTTCTAGCTTGGACCTTTTTATCGGTTGAACTATGCTCTAATTTACTACTCTCATTCGGGCTAGGAAGTAAGTCCCACAATCCAAAACGTGCCATTTAGCAAGCATGTAGTAACGACCCAAGTCCACTGCTAGTAGATGTTGTCCTCTTCGGGGTTTCCCTCAAGGTTTTTAAAACGTGTCTGTTAGAGAGAGGTTTCCACACCCTTATAAATGATGCTTCGTTCTCCTCCCCAACCGATACTAAATGGCACGTTTACACACCGACTTGCCCTCTGGGGGCCTAGCGCCCTCGTTAGCACTCGTTCCCTTCTCTAATCATTGAGGACTACCGGTGTCTGGCTTTGATACCATTCGTAACGGCCAAGCCCACCGTTAGCAGATCATTGTGAGATCCCATATCGGTTGGGAAGGAGAACAAAACATCCTTTATAAGGGTGTGGAAACCTCTCCCTAACAGACAGCGTTTTAAAAATCTTGAGATGAAGGCTAAAAGGGAAAACCCAACGAGAACAATATTTGCTAGCGGTGGGTTTGGGTTGTTACACATGTAGACCCAATACATCCTCTCGTGCCTTTCTCCTATCTCAAAAGGGTCTAACCGGGCATTGAAATAACGGGAGAAAGAAACAAACCGATGGAACGACAGCTTCCATTGTCTTTCTCTATACTGAAATGACAACGGTTACGATCACATAGGATCTCCACCCTCAATACATCCTCTCGTGCCTTGCTCCTATCTCAAAAGGGTCGAACCGGGCATTGAAATAACGGTAGAAAGAAACGAACCTATGGAATGACTTCCATCGTCTTTCTCTACACCAAAATCACATAGGGTCCCCTCCGTTTCATCCTTTTTAAGACGTAGTCCGTCTTTCGAGCTAATACTATAAAAAAAAAATCATTCTTTTGGTTATTTGTGAGATACCCTTTATCTTAAACGTAGTAAAAAGGCAAACCCACTTCATATTTTAACCTAAATATTGCAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGGTAAGAATTTCTTTGTAAGTGAAAGTGAAAAGGTAAAAACCATCAATTAATGGCTAAAGGCTTTTGGTTTTAATGGCAGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGGTTAGTAATTTTCTTACATTTACTGTACATTACCCTTTTGAATCCCTTCTATTTTTCATCTTTTTACTTTGAGGGTGTTTTTTTTTTGTGAAGATTTGCGTGTCATACTGAACGGTAACCGCTAAGTCCATACTGAACGGTAACCGCTAAGTCCACTGCTAGTAAATATTGTTCTCTTTGAACTTTCCCTCAGGGTTTTAAAATGTGTCTGGTAGGGAGAGGTTTTCACGCCCTATAAATAATGTTTCGTTCGGCTCTCCAACCGATGTGGGATCTCACGTGAACCTTTCATTTTAGTTCTTAAAAGTCTAGAAAGGAAGGTATAGATAAACAACTTTCAAAGGAAAACCACTTAAACTTTTCAATTCAACTCCCGAACAACTCATTAAACTTTACCGACATGTTTGTTAGGAAGGGGTTTCTATACCCTTATAAGGAATATTTTGTTTCTTTTCCAACTGATGTGGGATCTCCTCGACTATATCCTCGACTTATTCACCTTGACCTGTTACAGAGCTCGAAAAACAACGGTTCGAGTTTCAGAAGTTAGAAAATGGTCTTTACTATGATATTATGTTTACAAGAATAGTAAAACGTGTTTGTTAGGGAGAGATTTCTATATACTTATAAGGAATGTTTCGTTTCTCTCTTTAACTGAGGTGGGATCTCACATGAACATAGTTCAATCAGTTAAAATCATCCAAACGTGCTCGTACTATACATATCCTCGACTTAGAGGTTCAAAAGTTCAAATATCTTCACCGTGACCTGTTACTGAGCTCGAAAAACAACGGTTCGAGTTTCTTTAGTATGATATTATGTTTACGAGAATAGTGATGAGTATATGTTTGTTTATGCAGTCTGTGAAGGCACAAAGTAAGCATCTCTTCTTTGCAGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA

mRNA sequence

CCCATAAACACTTCATTCCTTTCCTTTGTCCACAAAAGGAAACCCTTTTATTTTCTTTCCAAGAATCTCGTTTTGGATATTGAATTCAACAGCCAAAACCCAGAAGAACAGCATCAAAATAAGGTGGGAGGTTGAAAATAATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA

Coding sequence (CDS)

ATGACGAGACAGAAAATTCAGATAAAGAAAATAGACAACATAGCAGCAAGGCAAGTGACTTTCTCAAAGAGAAGAAGAGGGCTATTCAAAAAAGCTCATGAACTAGCCACTCTTTGTGATGCTGATATTGCTCTCATTGTTTTTTCTGCTTCTGGCAAGCTATTTGACTATTCTAGCTCAAGCATGCAGGAGTTGCTGAGAAGACATAACATGATACCAGAGGTTAATAGCTTTGGTCAGCAGCCTCCATCTCAGGTTGAAAAGGATGCCTATGCTAAATTGAGTGAAGAATTTGCAGCCAAAACCAAAGAGCTTAAGCATATGAGGGGAGAGGATCTTCAAGATTTGGGAATAGAAGAATTAAAGCAGCTGGAGAAATTGCTGGAGATTGGTTTGAATCGTGTTATAGAGACCAAGGATGACAAGTTTCTAAAAGAAATTGGTGCTGGAAAGGAAAAGGAAGCTTTGTTGATGAAAGAGAATCAGAGACTAAGGAATGGGATGGTAACTTTGAATCATAGGGAGCAAGAACAAGCAGTGATTGGTGGGAGCTCCTTGGGGTCAAAGTCAAACACTACCAATAGCAGCTCCTCACCAAACCCTAATTCTCATGATTTTGATGACATTTCTCTTAAATTGGGCATCTTGACAATGAAGTCAGGGTTCCCCAATGGAGCTTTACTGATCATCACTTGA

Homology

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BLAST of CmoCh07G012350 vs. Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.9e-45
Identity = 116/242 (47.93%), Postives = 155/242 (64.05%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQIKKIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLFDYSSS
Sbjct: 1   MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+++L R ++  +      QP  +   VE   Y++LS+E + K+  L+ MRGE+LQ L 
Sbjct: 61  SMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTL------ 180
           IEEL+QLE+ LE GL+RVIE K DK ++EI   ++K   LM+EN++LR  ++ +      
Sbjct: 121 IEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNN 180

Query: 181 -NHREQEQAVI--------------GGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGIL 219
            N+  +E  V+               G S  S +N  NS   P P   D  D SLKLG+ 
Sbjct: 181 NNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPP-PQDDDSSDTSLKLGLA 240

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BLAST of CmoCh07G012350 vs. Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.1e-44
Identity = 115/236 (48.73%), Postives = 149/236 (63.14%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+E+L RHN+  +      QP  +   VE   +A++S+E A K+  L+ MRGE+LQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----------- 180
           IEEL+QLEK LE GL RVIETK DK + EI   ++K   LM EN+RLR            
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 -GMVTLNH------REQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            GM   N+       E E A +      S+S T   +S+  P   +  D SL+LG+
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

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BLAST of CmoCh07G012350 vs. Swiss-Prot
Match: AGL24_ARATH (MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.3e-40
Identity = 106/219 (48.40%), Postives = 153/219 (69.86%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
            M+++L R+++     +    PPS   ++E    ++LS+E   KTK+L+ +RGEDL  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EEL++LEKLLE GL+RV E K +  + +I + +++ + L+ EN+RLR+ + TL   E+ 
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL---ERA 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNS-HDFDDISLKLGI 216
           +      +L ++S TTN SS  +     D  D SLKLG+
Sbjct: 181 KLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

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BLAST of CmoCh07G012350 vs. Swiss-Prot
Match: MAD22_ORYSJ (MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.8e-40
Identity = 101/222 (45.50%), Postives = 147/222 (66.22%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R++ +IK+I++ AARQVTFSKRRRGLFKKA EL+ LCDAD+ALIVFS++GKL  ++SS
Sbjct: 1   MARERREIKRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSHFASS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQP--PSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGI 120
           SM E++ ++N         +QP     +E   YA L+E+ A  +  L+ MRGE+L+ L I
Sbjct: 61  SMNEIIDKYNTHSNNLGKAEQPSLDLNLEHSKYAHLNEQLAEASLRLRQMRGEELEGLSI 120

Query: 121 EELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQ-- 180
           +EL+QLEK LE GL+RV+ TKD +F+++I   + K + L +EN +LRN +  ++  E+  
Sbjct: 121 DELQQLEKNLEAGLHRVMLTKDQQFMEQISELQRKSSQLAEENMQLRNQVSQISPAEKQV 180

Query: 181 ---EQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
              E  V  G S  S     +S SS + ++ D  D+SLKLG+
Sbjct: 181 VDTENFVTEGQSSESVMTALHSGSSQSQDNDDGSDVSLKLGL 222

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BLAST of CmoCh07G012350 vs. Swiss-Prot
Match: MAD47_ORYSJ (MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 SV=2)

HSP 1 Score: 151.8 bits (382), Expect = 9.5e-36
Identity = 96/225 (42.67%), Postives = 138/225 (61.33%), Query Frame = 1


Query: 3   RQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSSSM 62
           R++I I++IDN+AARQVTFSKRRRGLFKKA EL+ LCDA++ L+VFSA+GKLF ++S+SM
Sbjct: 22  RERIAIRRIDNLAARQVTFSKRRRGLFKKAEELSILCDAEVGLVVFSATGKLFQFASTSM 81

Query: 63  QELLRRHNMIPEVNSFGQQPPSQV-----EKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 122
           ++++ R+N      +  +  PSQ+     +    A+L EE A  +  L+ MRGE+L  L 
Sbjct: 82  EQIIDRYN--SHSKTLQRAEPSQLDLQGEDSSTCARLKEELAETSLRLRQMRGEELHRLN 141

Query: 123 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 182
           +E+L++LEK LE GL  V++TK  K L EI   + K   L++EN RL+  +        E
Sbjct: 142 VEQLQELEKSLESGLGSVLKTKSKKILDEIDGLERKRMQLIEENLRLKEQLQVSRMSRME 201

Query: 183 QAVIGGSS-------LGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +   G  S         S+S T  S   P P++    D SLKLG+
Sbjct: 202 EMQPGPDSEIVYEEGQSSESVTNASYPRPPPDNDYSSDTSLKLGL 244

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BLAST of CmoCh07G012350 vs. TrEMBL
Match: A0A061E173_THECC (MIKC mads-box transcription factor, putative isoform 1 OS=Theobroma cacao GN=TCM_007378 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 2.8e-50
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+     + +   +
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQ---QIGNSSMD 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           QA++      S+S      S+  P  ++  DISL+LG+      FPN
Sbjct: 181 QAIVPQQGQPSESAARVWISADPPQGYNNSDISLRLGL-----PFPN 219

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BLAST of CmoCh07G012350 vs. TrEMBL
Match: A0A0A0KW94_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182260 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 4.7e-50
Identity = 123/172 (71.51%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 53  KLFDYSSSSMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGED 112
           K  D   SSM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+
Sbjct: 2   KTIDEKISSMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEE 61

Query: 113 LQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTL 172
           LQ+LGIEELKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL
Sbjct: 62  LQELGIEELKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETL 121

Query: 173 NHR----EQEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            +R    E+E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 122 INRDDQQEEEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 172

[Close]

BLAST of CmoCh07G012350 vs. TrEMBL
Match: A0A061E2Z6_THECC (MIKC mads-box transcription factor, putative isoform 2 OS=Theobroma cacao GN=TCM_007378 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.6e-48
Identity = 112/182 (61.54%), Postives = 140/182 (76.92%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTL---NHR 177
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+   + L   NH+
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQQQLYLSKANHQ 180

[Close]

BLAST of CmoCh07G012350 vs. TrEMBL
Match: H6BFA0_ACTCH (SVP4 OS=Actinidia chinensis PE=2 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.9e-47
Identity = 122/227 (53.74%), Postives = 154/227 (67.84%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M RQ+IQIKKIDN+ ARQVTFSKRRRGLFKKA EL+TLCDA+IALIVFSA+G+LF+YSSS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM +++ RHN+  + N   Q  PS   Q+E   YA L  E   +T+EL+ +RGE+L  LG
Sbjct: 61  SMNQVIERHNLQGD-NLVQQNQPSLELQLENSTYAMLCNEVEERTRELRQLRGEELHGLG 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEK LE GL R+++TKD++F KEI A K KE  L +EN  L+  +  +N    E
Sbjct: 121 VEELKNLEKSLEGGLGRILKTKDERFEKEITALKRKETRLREENLWLQQRLQIVNASTPE 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           Q    G S  S+S T N SS+  P  +D  D SLKL +      FPN
Sbjct: 181 Q----GQS--SESITNNGSSTAPPQDYDSSDTSLKLSL-----PFPN 215

[Close]

BLAST of CmoCh07G012350 vs. TrEMBL
Match: H6BF96_ACTDE (SVP4 OS=Actinidia deliciosa PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.4e-47
Identity = 125/228 (54.82%), Postives = 155/228 (67.98%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M RQ+IQIKKIDN+ ARQVTFSKRRRGLFKKA EL+TLCDA+IALIVFSA+G+LF+YSSS
Sbjct: 1   MVRQRIQIKKIDNLTARQVTFSKRRRGLFKKAQELSTLCDAEIALIVFSATGRLFEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQ-QPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDL 120
           SM +++ RHN+  + N+  Q   PS   Q+E   YA L  E   KT+EL+ +RGE+L  L
Sbjct: 61  SMNQVIERHNL--QGNNLVQLNQPSLELQLENSTYAMLCNEVEEKTRELRQLRGEELHGL 120

Query: 121 GIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQ 180
           G+EELK+LEK LE GL RV++TKD+KF KEI A K KE  L +EN  L+  +   N    
Sbjct: 121 GVEELKKLEKSLEEGLGRVLKTKDEKFEKEITALKRKETRLREENLWLQQRLQIANASTP 180

Query: 181 EQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           EQ    G S  S+S T N SS+  P  +D  D SLKL +      FPN
Sbjct: 181 EQ----GQS--SESITNNGSSTAPPQDYDSSDTSLKLSL-----PFPN 215

[Close]

BLAST of CmoCh07G012350 vs. TAIR10
Match: AT2G22540.1 (AT2G22540.1 K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 181.4 bits (459), Expect = 6.3e-46
Identity = 115/236 (48.73%), Postives = 149/236 (63.14%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KIQI+KIDN  ARQVTFSKRRRGLFKKA EL+ LCDAD+ALI+FS++GKLF++ SS
Sbjct: 1   MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQ---VEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           SM+E+L RHN+  +      QP  +   VE   +A++S+E A K+  L+ MRGE+LQ L 
Sbjct: 61  SMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLD 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----------- 180
           IEEL+QLEK LE GL RVIETK DK + EI   ++K   LM EN+RLR            
Sbjct: 121 IEELQQLEKALETGLTRVIETKSDKIMSEISELQKKGMQLMDENKRLRQQGTQLTEENER 180

Query: 181 -GMVTLNH------REQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            GM   N+       E E A +      S+S T   +S+  P   +  D SL+LG+
Sbjct: 181 LGMQICNNVHAHGGAESENAAVYEEGQSSESITNAGNSTGAPVDSESSDTSLRLGL 236

[Close]

BLAST of CmoCh07G012350 vs. TAIR10
Match: AT4G24540.1 (AT4G24540.1 AGAMOUS-like 24)

HSP 1 Score: 167.9 bits (424), Expect = 7.2e-42
Identity = 106/219 (48.40%), Postives = 153/219 (69.86%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R+KI+IKKIDNI ARQVTFSKRRRG+FKKA EL+ LCDAD+ALI+FSA+GKLF++SSS
Sbjct: 1   MAREKIRIKKIDNITARQVTFSKRRRGIFKKADELSVLCDADVALIIFSATGKLFEFSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
            M+++L R+++     +    PPS   ++E    ++LS+E   KTK+L+ +RGEDL  L 
Sbjct: 61  RMRDILGRYSLHASNINKLMDPPSTHLRLENCNLSRLSKEVEDKTKQLRKLRGEDLDGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EEL++LEKLLE GL+RV E K +  + +I + +++ + L+ EN+RLR+ + TL   E+ 
Sbjct: 121 LEELQRLEKLLESGLSRVSEKKGECVMSQIFSLEKRGSELVDENKRLRDKLETL---ERA 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNS-HDFDDISLKLGI 216
           +      +L ++S TTN SS  +     D  D SLKLG+
Sbjct: 181 KLTTLKEALETESVTTNVSSYDSGTPLEDDSDTSLKLGL 216

[Close]

BLAST of CmoCh07G012350 vs. TAIR10
Match: AT4G37940.1 (AT4G37940.1 AGAMOUS-like 21)

HSP 1 Score: 109.8 bits (273), Expect = 2.3e-24
Identity = 70/179 (39.11%), Postives = 104/179 (58.10%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI I++ID+  +RQVTFSKRR+GL KKA ELA LCDA++ LI+FS++GKL+D++SS
Sbjct: 1   MGRGKIVIQRIDDSTSRQVTFSKRRKGLIKKAKELAILCDAEVGLIIFSSTGKLYDFASS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVE--KDAYAKLSEEFAAKTKELKHMRGEDLQDLGI 120
           SM+ ++ R+N           P S+V+  +   A L +E  A  +  + M GE L  L +
Sbjct: 61  SMKSVIDRYNKSKIEQQQLLNPASEVKFWQREAAVLRQELHALQENHRQMMGEQLNGLSV 120

Query: 121 EELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 178
            EL  LE  +EI L  +   K+    +EI    +K  L+ +EN  L   +  ++    E
Sbjct: 121 NELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVE 179

[Close]

BLAST of CmoCh07G012350 vs. TAIR10
Match: AT5G51870.3 (AT5G51870.3 AGAMOUS-like 71)

HSP 1 Score: 109.4 bits (272), Expect = 3.0e-24
Identity = 68/171 (39.77%), Postives = 102/171 (59.65%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R KI+IKKI+N+ +RQVTFSKRR GLFKKAHEL+ LCDA +A IVFS SG+L +YSSS
Sbjct: 1   MVRGKIEIKKIENVTSRQVTFSKRRSGLFKKAHELSVLCDAQVAAIVFSQSGRLHEYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKEL-------KHMRGEDL 120
            M++++ R+          ++P  QVE+    +L  E     K++       + + G+ L
Sbjct: 61  QMEKIIDRYGKFSNAFYVAERP--QVER-YLQELKMEIDRMVKKIDLLEVHHRKLLGQGL 120

Query: 121 QDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRL 165
               + EL++++  +E  L  V   K + +  ++   KEKE  L+ E +RL
Sbjct: 121 DSCSVTELQEIDTQIEKSLRIVRSRKAELYADQLKKLKEKERELLNERKRL 168

[Close]

BLAST of CmoCh07G012350 vs. TAIR10
Match: AT3G57390.1 (AT3G57390.1 AGAMOUS-like 18)

HSP 1 Score: 108.6 bits (270), Expect = 5.2e-24
Identity = 79/234 (33.76%), Postives = 125/234 (53.42%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           M R +I+IKKI+NI +RQVTFSKRR GL KKA EL+ LCDA++ALI+FS++GK++D+SS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQV------EKDAYAKLSEEFAAKTKEL----KHMRG 120
            M+++L R+          QQ   Q+        +A  +  +    + + L    + ++G
Sbjct: 61  CMEQILSRYGYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLKG 120

Query: 121 EDLQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLR----- 180
           ++L+ +   +L  LE  L   L+ V + K    L +I   + +E   ++ENQ LR     
Sbjct: 121 KELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRKQVEM 180

Query: 181 ----NGMVTLNHREQEQAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGI 216
               +G   LN R Q+      SS  +   +++S    N N     D SL+LG+
Sbjct: 181 LGRGSGPKVLNERPQD------SSPEADPESSSSEEDENDNEEHHSDTSLQLGL 228

[Close]

BLAST of CmoCh07G012350 vs. NCBI nr
Match: gi|659108938|ref|XP_008454463.1| (PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 4.2e-84
Identity = 175/223 (78.48%), Postives = 200/223 (89.69%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKI+IKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEE 120
           SM +LLRRHNM+PE+N+  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEE
Sbjct: 61  SMLDLLRRHNMLPELNNISQLPPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----GMVTLNHREQ 180
           LK+LEKLLE GLNRVIETKD+KFLKEIG  KEKE LLMKENQRLRN     +V  + +E+
Sbjct: 121 LKELEKLLENGLNRVIETKDEKFLKEIGTVKEKETLLMKENQRLRNKLMETLVDRDEQEE 180

Query: 181 EQA--VIGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           E+A  VIGG+S+G  SKSNT+NSSSS NPNS D+DD+SLKLG+
Sbjct: 181 EEAVVVIGGNSVGSKSKSNTSNSSSSQNPNSQDYDDVSLKLGL 223

[Close]

BLAST of CmoCh07G012350 vs. NCBI nr
Match: gi|778692373|ref|XP_011653451.1| (PREDICTED: MADS-box protein JOINTLESS-like [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 5.1e-82
Identity = 179/224 (79.91%), Postives = 200/224 (89.29%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKI+IKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS
Sbjct: 1   MTRQKIEIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEE 120
           SM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEE
Sbjct: 61  SMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEE 120

Query: 121 LKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTLNHR----E 180
           LKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL +R    E
Sbjct: 121 LKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETLINRDDQQE 180

Query: 181 QEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 181 EEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 223

[Close]

BLAST of CmoCh07G012350 vs. NCBI nr
Match: gi|659108940|ref|XP_008454464.1| (PREDICTED: MADS-box protein SVP-like isoform X2 [Cucumis melo])

HSP 1 Score: 208.0 bits (528), Expect = 1.8e-50
Identity = 115/162 (70.99%), Postives = 139/162 (85.80%), Query Frame = 1


Query: 62  MQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLGIEEL 121
           M +LLRRHNM+PE+N+  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+LQ+LGIEEL
Sbjct: 1   MLDLLRRHNMLPELNNISQLPPSQLEKSAHAKLTEEFAAKTKELRHMKGEELQELGIEEL 60

Query: 122 KQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRN----GMVTLNHREQE 181
           K+LEKLLE GLNRVIETKD+KFLKEIG  KEKE LLMKENQRLRN     +V  + +E+E
Sbjct: 61  KELEKLLENGLNRVIETKDEKFLKEIGTVKEKETLLMKENQRLRNKLMETLVDRDEQEEE 120

Query: 182 QA--VIGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
           +A  VIGG+S+G  SKSNT+NSSSS NPNS D+DD+SLKLG+
Sbjct: 121 EAVVVIGGNSVGSKSKSNTSNSSSSQNPNSQDYDDVSLKLGL 162

[Close]

BLAST of CmoCh07G012350 vs. NCBI nr
Match: gi|590688071|ref|XP_007042844.1| (MIKC mads-box transcription factor, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 206.8 bits (525), Expect = 4.0e-50
Identity = 123/227 (54.19%), Postives = 160/227 (70.48%), Query Frame = 1


Query: 1   MTRQKIQIKKIDNIAARQVTFSKRRRGLFKKAHELATLCDADIALIVFSASGKLFDYSSS 60
           MTRQKIQIKKIDN AARQVTFSKRRRGLFKKAHEL+TLCDA+IAL+VFSA+GKLF+YSS+
Sbjct: 1   MTRQKIQIKKIDNTAARQVTFSKRRRGLFKKAHELSTLCDAEIALVVFSATGKLFEYSST 60

Query: 61  SMQELLRRHNMIPEVNSFGQQPPS---QVEKDAYAKLSEEFAAKTKELKHMRGEDLQDLG 120
           S  +++ R N+  E  +   + PS   Q+E  A+A L +E A K +EL+H+RGE+LQ L 
Sbjct: 61  STGQVIERRNLQSERTNGLDRVPSLEMQIESSAHAMLGKEIAEKNRELRHLRGEELQGLN 120

Query: 121 IEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNGMVTLNHREQE 180
           +EELK LEKLLE GL+RV ETKD++FLKEI   K K A LM+ENQ+L+     + +   +
Sbjct: 121 LEELKHLEKLLEAGLSRVTETKDERFLKEISNLKRKGAELMEENQQLKQ---QIGNSSMD 180

Query: 181 QAVIGGSSLGSKSNTTNSSSSPNPNSHDFDDISLKLGILTMKSGFPN 225
           QA++      S+S      S+  P  ++  DISL+LG+      FPN
Sbjct: 181 QAIVPQQGQPSESAARVWISADPPQGYNNSDISLRLGL-----PFPN 219

[Close]

BLAST of CmoCh07G012350 vs. NCBI nr
Match: gi|700198737|gb|KGN53895.1| (hypothetical protein Csa_4G182260 [Cucumis sativus])

HSP 1 Score: 206.1 bits (523), Expect = 6.7e-50
Identity = 123/172 (71.51%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 53  KLFDYSSSSMQELLRRHNMIPEVNSFGQQPPSQVEKDAYAKLSEEFAAKTKELKHMRGED 112
           K  D   SSM +LLRRHNM+PE+NS  Q PPSQ+EK A+AKL+EEFAAKTKEL+HM+GE+
Sbjct: 2   KTIDEKISSMLDLLRRHNMLPELNSISQ-PPSQLEKSAHAKLTEEFAAKTKELRHMKGEE 61

Query: 113 LQDLGIEELKQLEKLLEIGLNRVIETKDDKFLKEIGAGKEKEALLMKENQRLRNG-MVTL 172
           LQ+LGIEELKQLEKLLE GLNRVIETKD+KFLKEI   KEKE+LLMKENQRLRN  M TL
Sbjct: 62  LQELGIEELKQLEKLLENGLNRVIETKDEKFLKEIVTVKEKESLLMKENQRLRNKLMETL 121

Query: 173 NHR----EQEQAV--IGGSSLG--SKSNTTNSSSSPNPNSHDFDDISLKLGI 216
            +R    E+E+AV  I G+S+G  SKSNT+NSSSS NPNS D+DDISLKLG+
Sbjct: 122 INRDDQQEEEEAVVLIAGNSVGSKSKSNTSNSSSSQNPNSQDYDDISLKLGL 172

The following BLAST results are available for this feature:

BLAST of CmoCh07G012350 vs. Swiss-Prot


Match Name	E-value	Identity	Description
JOIN_SOLLC	2.9e-45	47.93	MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1	[more]
SVP_ARATH	1.1e-44	48.73	MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1	[more]
AGL24_ARATH	1.3e-40	48.40	MADS-box protein AGL24 OS=Arabidopsis thaliana GN=AGL24 PE=1 SV=1	[more]
MAD22_ORYSJ	4.8e-40	45.50	MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica GN=MADS22 PE=2 ...	[more]
MAD47_ORYSJ	9.5e-36	42.67	MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica GN=MADS47 PE=1 ...	[more]

BLAST of CmoCh07G012350 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061E173_THECC	2.8e-50	54.19	MIKC mads-box transcription factor, putative isoform 1 OS=Theobroma cacao GN=TCM...	[more]
A0A0A0KW94_CUCSA	4.7e-50	71.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G182260 PE=4 SV=1	[more]
A0A061E2Z6_THECC	2.6e-48	61.54	MIKC mads-box transcription factor, putative isoform 2 OS=Theobroma cacao GN=TCM...	[more]
H6BFA0_ACTCH	4.9e-47	53.74	SVP4 OS=Actinidia chinensis PE=2 SV=1	[more]
H6BF96_ACTDE	6.4e-47	54.82	SVP4 OS=Actinidia deliciosa PE=2 SV=1	[more]

BLAST of CmoCh07G012350 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G22540.1	6.3e-46	48.73	K-box region and MADS-box transcription factor family protein	[more]
AT4G24540.1	7.2e-42	48.40	AGAMOUS-like 24	[more]
AT4G37940.1	2.3e-24	39.11	AGAMOUS-like 21	[more]
AT5G51870.3	3.0e-24	39.77	AGAMOUS-like 71	[more]
AT3G57390.1	5.2e-24	33.76	AGAMOUS-like 18	[more]

BLAST of CmoCh07G012350 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659108938\|ref\|XP_008454463.1\|	4.2e-84	78.48	PREDICTED: MADS-box protein JOINTLESS-like isoform X1 [Cucumis melo]	[more]
gi\|778692373\|ref\|XP_011653451.1\|	5.1e-82	79.91	PREDICTED: MADS-box protein JOINTLESS-like [Cucumis sativus]	[more]
gi\|659108940\|ref\|XP_008454464.1\|	1.8e-50	70.99	PREDICTED: MADS-box protein SVP-like isoform X2 [Cucumis melo]	[more]
gi\|590688071\|ref\|XP_007042844.1\|	4.0e-50	54.19	MIKC mads-box transcription factor, putative isoform 1 [Theobroma cacao]	[more]
gi\|700198737\|gb\|KGN53895.1\|	6.7e-50	71.51	hypothetical protein Csa_4G182260 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002100	TF_MADSbox
IPR002487	TF_Kbox

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0046983	protein dimerization activity
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **Cellular Component**
Term	Definition
GO:0005634	nucleus

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh07G012350.1	CmoCh07G012350.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 23..38 score: 1.3E-25coord: 38..59 score: 1.3E-25coord: 3..23 score: 1.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 score: 3.2
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 score: 6.4
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57 scor
IPR002100	Transcription factor, MADS-box	PROFILE	PS50066	MADS_BOX_2	coord: 1..61 score: 28
IPR002100	Transcription factor, MADS-box	unknown	SSF55455	SRF-like	coord: 2..76 score: 9.16
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 85..166 score: 2.9
IPR002487	Transcription factor, K-box	PROFILE	PS51297	K_BOX	coord: 84..175 score: 11
None	No IPR available	unknown	Coil	Coil	coord: 91..111 scor
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 2..171 score: 5.2
None	No IPR available	PANTHER	PTHR11945:SF179	MADS-BOX PROTEIN SVP	coord: 2..171 score: 5.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh07G012350	CmaCh07G011900	Cucurbita maxima (Rimu)	cmacmoB875
CmoCh07G012350	Cp4.1LG19g01700	Cucurbita pepo (Zucchini)	cmocpeB817
CmoCh07G012350	Carg12628	Silver-seed gourd	carcmoB0395

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh07G012350	Silver-seed gourd	carcmoB0864
CmoCh07G012350	Cucumber (Chinese Long) v3	cmocucB1000
CmoCh07G012350	Watermelon (97103) v2	cmowmbB860
CmoCh07G012350	Wax gourd	cmowgoB1064
CmoCh07G012350	Cucurbita moschata (Rifu)	cmocmoB456
CmoCh07G012350	Cucurbita maxima (Rimu)	cmacmoB668
CmoCh07G012350	Melon (DHL92) v3.5.1	cmomeB785
CmoCh07G012350	Watermelon (Charleston Gray)	cmowcgB762
CmoCh07G012350	Watermelon (97103) v1	cmowmB817
CmoCh07G012350	Cucurbita pepo (Zucchini)	cmocpeB807
CmoCh07G012350	Bottle gourd (USVL1VR-Ls)	cmolsiB779
CmoCh07G012350	Cucumber (Gy14) v2	cgybcmoB538
CmoCh07G012350	Melon (DHL92) v3.6.1	cmomedB888