CmoCh07G006420.1 (mRNA) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh07G006420.1
Type	mRNA
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Phytosulfokines 3
Location	Cmo_Chr07 : 2901875 .. 2902801 (+)
Sequence length	822

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGTACAGAGTCCAAGTAGCACCTTCTCAAGTTCACACGCTTGCCCATTCTCCCTCTCTCTCCTTCCCCTTTTATAAGCAACTCCTTTCCTTCCCATCCCTTTATACACTCACTTCCACAACCACGCATGGGTTCTAAATTCATCACCTTTCTCTGCCTAATCTTCCTCCTCCACCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCTGTTCCCACCGTTTCATCCGATGCACCAGCTACCCAAATCTCAAATCAGGTTCGTCAAGAAATTTATCAATAACTTATCAACTTAAATCTTTTTAGTTCTGGTAAACAATTACGAACCGATATTGACATGTTTTTTAATTGGGTTTTTTTATAGGGGTTGGAAACAGATGAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGACGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAGTCAAAAATCATACTTGCCTATCCATTGGCTTATATATAAACTTCTATCCATTGGCTATCTATTGGCTTATAGGGTTGAATTAATAATATTCTCTCAACTCTACCATATTGCCACCTTTCATAAACTTTTACAGCGCTTAATTTTAATGTACGAATTCCAAGAGTGAAAAAGAAAAACAATGAAGCACATGTTAAATTTGGATGTTGAGGCTGATTAGATATTTGGATCCAAGCGCCATGCAAGATTTAGGCAGCTTTTTGACACCAAGCATATGAGATGAATTTGATGATATAAATGGAAATGGTCCCTCGGGGTCGGGTTTCAACTTTAAGCGCTAATTAGCCAAAGTGGATCAAAGTGGCCGGCCATTGGTGGCTCCAACGCGTAGCAATTAAAACATGAGCGTAGAAGAAAAGGCAAATGGGG

mRNA sequence

CGTACAGAGTCCAAGTAGCACCTTCTCAAGTTCACACGCTTGCCCATTCTCCCTCTCTCTCCTTCCCCTTTTATAAGCAACTCCTTTCCTTCCCATCCCTTTATACACTCACTTCCACAACCACGCATGGGTTCTAAATTCATCACCTTTCTCTGCCTAATCTTCCTCCTCCACCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCTGTTCCCACCGTTTCATCCGATGCACCAGCTACCCAAATCTCAAATCAGGGGTTGGAAACAGATGAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGACGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAGTCAAAAATCATACTTGCCTATCCATTGGCTTATATATAAACTTCTATCCATTGGCTATCTATTGGCTTATAGGGTTGAATTAATAATATTCTCTCAACTCTACCATATTGCCACCTTTCATAAACTTTTACAGCGCTTAATTTTAATGTACGAATTCCAAGAGTGAAAAAGAAAAACAATGAAGCACATGTTAAATTTGGATGTTGAGGCTGATTAGATATTTGGATCCAAGCGCCATGCAAGATTTAGGCAGCTTTTTGACACCAAGCATATGAGATGAATTTGATGATATAAATGGAAATGGTCCCTCGGGGTCGGGTTTCAACTTTAAGCGCTAATTAGCCAAAGTGGATCAAAGTGGCCGGCCATTGGTGGCTCCAACGCGTAGCAATTAAAACATGAGCGTAGAAGAAAAGGCAAATGGGG

Coding sequence (CDS)

ATGGGTTCTAAATTCATCACCTTTCTCTGCCTAATCTTCCTCCTCCACCTCCTCTCCAACAGCCCGTCTGCCTACGCTGCCCGCCCTGTTCCCACCGTTTCATCCGATGCACCAGCTACCCAAATCTCAAATCAGGGGTTGGAAACAGATGAAAGTGATAGTGAGATGATGGATGAGAGGTGCCATGGAGTTGGGGAAGAAGAGTGCTTGATCAGACGAACTCTAGCTGCCCACTTAGATTATGTGTATACTCAAAAGCATAAGCCATAG

Homology

[Close]

BLAST of CmoCh07G006420.1 vs. Swiss-Prot
Match: PSK3_ARATH (Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 5.3e-11
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEECLI 71
          IF++ LL  S   YAAR  PT +     T +S +    +    ++ +E C+G+GEEECLI
Sbjct: 7  IFIMALLLCSTLTYAARLTPTTT-----TALSRENSVKEIEGDKVEEESCNGIGEEECLI 66

Query: 72 RRTLAAHLDYVYTQKHKP 90
          RR+L  H DY+YTQ HKP
Sbjct: 67 RRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of CmoCh07G006420.1 vs. Swiss-Prot
Match: PSK_ASPOF (Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.7e-09
Identity = 43/89 (48.31%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 1  MGSKFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDER 60
          M SK IT L LI LL  LS    A AARP+    S      I  +          + DE 
Sbjct: 1  MSSKAITLL-LIALLFSLS---LAQAARPLQPADSTKSVHVIPEK----------VHDEA 60

Query: 61 CHGVGEEECLIRRTLAAHLDYVYTQKHKP 90
          C GVGEEECL+RRTL AH+DY+YTQ H P
Sbjct: 61 CEGVGEEECLMRRTLTAHVDYIYTQDHNP 75

[Close]

BLAST of CmoCh07G006420.1 vs. Swiss-Prot
Match: PSK4_ORYSJ (Phytosulfokines 4 OS=Oryza sativa subsp. japonica GN=PSK4 PE=1 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 5.5e-08
Identity = 34/76 (44.74%), Postives = 42/76 (55.26%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEECLI 71
          + L+   S++  A A RP PT S D  A Q + Q        SE+      G GEEECL 
Sbjct: 14 VLLIFAASSATVAMAGRPTPTTSLDEEAAQAAAQ--------SEIGGGCKEGEGEEECLA 73

Query: 72 RRTLAAHLDYVYTQKH 88
          RRTL AH DY+YTQ+H
Sbjct: 74 RRTLTAHTDYIYTQQH 81

[Close]

BLAST of CmoCh07G006420.1 vs. Swiss-Prot
Match: PSK5_ARATH (Phytosulfokines 5 OS=Arabidopsis thaliana GN=PSK5 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 2.1e-07
Identity = 40/87 (45.98%), Postives = 47/87 (54.02%), Query Frame = 1


Query: 4  KFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHG 63
          KF TFLC+I LL  L ++ +  +AR  PT          S    E      E  +  C G
Sbjct: 3  KFTTFLCIIALL--LCSTLTHASARLNPT----------SVYPEENSFKKLEQGEVICEG 62

Query: 64 VGEEEC-LIRRTLAAHLDYVYTQKHKP 90
          VGEEEC LIRRTL AH DY+YTQ H P
Sbjct: 63 VGEEECFLIRRTLVAHTDYIYTQNHNP 77

[Close]

BLAST of CmoCh07G006420.1 vs. Swiss-Prot
Match: PSK2_ARATH (Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 8.8e-06
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVS-SDAPATQISN--QGLETDESDSEMMDERCHGVGEEE 71
          +  + LL  S     ARP P +S S   A    N  + +E    D  M+DE C G  +E+
Sbjct: 7  LLTIALLLCSTLMCTARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENC-GADDED 66

Query: 72 CLIRRTLAAHLDYVYTQKHK 89
          CL+RRTL AH DY+YTQK K
Sbjct: 67 CLMRRTLVAHTDYIYTQKKK 85

[Close]

BLAST of CmoCh07G006420.1 vs. TrEMBL
Match: A0A0A0KLK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495850 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.9e-18
Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 1


Query: 1  MGSKFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEM-MDE 60
          M SKF +FL + FLL LL + P AYAARP P   +  P  +++    E  +SD EM MDE
Sbjct: 1  MPSKFFSFLFIFFLL-LLLHRPLAYAARPTPAAPTTIPTQELAE---ELKQSDGEMVMDE 60

Query: 61 RCHGVGEEECLIRRTLAAHLDYVYTQKHKP 90
           C GVGEEECL+RRTLAAHLDYVYTQKHKP
Sbjct: 61 NCDGVGEEECLMRRTLAAHLDYVYTQKHKP 86

[Close]

BLAST of CmoCh07G006420.1 vs. TrEMBL
Match: B9SH34_RICCO (Phytosulfokines, putative OS=Ricinus communis GN=RCOM_0581720 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.7e-13
Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEECLI 71
          +FL+ LL  S   +A+RP P  S+ +      +QG+  +E  +EM++E C GVGEEECL+
Sbjct: 11 LFLVALLLCSTLIHASRPEPAFSNGSLPKNQQDQGVNQEEH-AEMVEESCEGVGEEECLM 70

Query: 72 RRTLAAHLDYVYTQKHKP 90
          RRTLAAH+DY+YTQKHKP
Sbjct: 71 RRTLAAHIDYIYTQKHKP 87

[Close]

BLAST of CmoCh07G006420.1 vs. TrEMBL
Match: A0A0B0PQH6_GOSAR (Phytosulfokines 3-like protein OS=Gossypium arboreum GN=F383_10569 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 6.7e-13
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1


Query: 9  LCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEE 68
          LC +F+  LL N   +YAARP PT+S     TQ  ++G+E ++ D+   DE C G+G+EE
Sbjct: 4  LCSLFIAALLFNFMQSYAARPEPTLS----LTQ--HEGVEAEKVDA---DENCEGIGKEE 63

Query: 69 CLIRRTLAAHLDYVYTQKHKP 90
          CL+RRTLAAH+DY+YTQ HKP
Sbjct: 64 CLMRRTLAAHVDYIYTQNHKP 75

[Close]

BLAST of CmoCh07G006420.1 vs. TrEMBL
Match: A0A0D2SLH6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_010G026700 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-12
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1


Query: 9  LCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEE 68
          LC +F+  LL N   +YAARP PT+S     TQ  ++G+E ++ D+   DE C G+G+EE
Sbjct: 4  LCSLFIAALLFNFMLSYAARPEPTLS----LTQ--HEGVEAEKVDA---DENCEGIGKEE 63

Query: 69 CLIRRTLAAHLDYVYTQKHKP 90
          CL+RRTLAAH+DY+YTQ HKP
Sbjct: 64 CLMRRTLAAHVDYIYTQNHKP 75

[Close]

BLAST of CmoCh07G006420.1 vs. TrEMBL
Match: W9QZQ5_9ROSA (Phytosulfokines 3 OS=Morus notabilis GN=L484_003349 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.7e-12
Identity = 42/90 (46.67%), Postives = 62/90 (68.89%), Query Frame = 1


Query: 1   MGSKFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEM-MDE 60
           M SK    LC++ LL   S +  A   RP P +++D P  ++ +QG++ D++  ++ ++E
Sbjct: 54  MSSKVTPTLCMVVLLLFFSITSRA---RPGPGITND-PVEELVHQGVDHDQAAEKVTVEE 113

Query: 61  RCHGVGEEECLIRRTLAAHLDYVYTQKHKP 90
            C GVGEEECL+RRTLAAH+DY+YTQK KP
Sbjct: 114 SCEGVGEEECLMRRTLAAHIDYIYTQKQKP 139

[Close]

BLAST of CmoCh07G006420.1 vs. TAIR10
Match: AT3G49780.1 (AT3G49780.1 phytosulfokine 4 precursor)

HSP 1 Score: 68.2 bits (165), Expect = 3.0e-12
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEECLI 71
          IF++ LL  S   YAAR  PT +     T +S +    +    ++ +E C+G+GEEECLI
Sbjct: 7  IFIMALLLCSTLTYAARLTPTTT-----TALSRENSVKEIEGDKVEEESCNGIGEEECLI 66

Query: 72 RRTLAAHLDYVYTQKHKP 90
          RR+L  H DY+YTQ HKP
Sbjct: 67 RRSLVLHTDYIYTQNHKP 79

[Close]

BLAST of CmoCh07G006420.1 vs. TAIR10
Match: AT5G65870.1 (AT5G65870.1 phytosulfokine 5 precursor)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08
Identity = 40/87 (45.98%), Postives = 47/87 (54.02%), Query Frame = 1


Query: 4  KFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHG 63
          KF TFLC+I LL  L ++ +  +AR  PT          S    E      E  +  C G
Sbjct: 3  KFTTFLCIIALL--LCSTLTHASARLNPT----------SVYPEENSFKKLEQGEVICEG 62

Query: 64 VGEEEC-LIRRTLAAHLDYVYTQKHKP 90
          VGEEEC LIRRTL AH DY+YTQ H P
Sbjct: 63 VGEEECFLIRRTLVAHTDYIYTQNHNP 77

[Close]

BLAST of CmoCh07G006420.1 vs. TAIR10
Match: AT2G22860.1 (AT2G22860.1 phytosulfokine 2 precursor)

HSP 1 Score: 50.8 bits (120), Expect = 4.9e-07
Identity = 34/80 (42.50%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVS-SDAPATQISN--QGLETDESDSEMMDERCHGVGEEE 71
          +  + LL  S     ARP P +S S   A    N  + +E    D  M+DE C G  +E+
Sbjct: 7  LLTIALLLCSTLMCTARPEPAISISITTAADPCNMEKKIEGKLDDMHMVDENC-GADDED 66

Query: 72 CLIRRTLAAHLDYVYTQKHK 89
          CL+RRTL AH DY+YTQK K
Sbjct: 67 CLMRRTLVAHTDYIYTQKKK 85

[Close]

BLAST of CmoCh07G006420.1 vs. TAIR10
Match: AT4G37720.1 (AT4G37720.1 phytosulfokine 6 precursor)

HSP 1 Score: 48.1 bits (113), Expect = 3.2e-06
Identity = 30/78 (38.46%), Postives = 41/78 (52.56%), Query Frame = 1


Query: 11 LIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESD-SEMMDERCHGVGEEEC 70
          LI +  LL  +    +ARP P   +    +      LE  ES   E+  E C    +E+C
Sbjct: 7  LITIALLLCATMLTCSARPEPAYFASFTTSPADTLSLEMIESKLHEVAGESCDKEDDEDC 66

Query: 71 LIRRTLAAHLDYVYTQKH 88
          L+RRTL AHLDY+YT K+
Sbjct: 67 LVRRTLTAHLDYIYTHKN 84

[Close]

BLAST of CmoCh07G006420.1 vs. NCBI nr
Match: gi|659079751|ref|XP_008440424.1| (PREDICTED: phytosulfokines 3 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 7.6e-18
Identity = 59/92 (64.13%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 1  MGSKFITFLCLIFLL-HLLSNSPSAYAARPVPTVSSDAPATQISNQGL--ETDESDSEMM 60
          M SKF +FL +I LL HL    P AYAARP P     A  T I +QGL  E+ +SD EM 
Sbjct: 1  MPSKFFSFLFIILLLLHLYR--PLAYAARPAP-----AAPTAIPSQGLAGESKQSDGEMT 60

Query: 61 DERCHGVGEEECLIRRTLAAHLDYVYTQKHKP 90
          DE C GVGEEECL+RRTLAAHLDYVYTQKHKP
Sbjct: 61 DENCDGVGEEECLMRRTLAAHLDYVYTQKHKP 85

[Close]

BLAST of CmoCh07G006420.1 vs. NCBI nr
Match: gi|700193427|gb|KGN48631.1| (hypothetical protein Csa_6G495850 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 1.0e-17
Identity = 55/90 (61.11%), Postives = 64/90 (71.11%), Query Frame = 1


Query: 1  MGSKFITFLCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEM-MDE 60
          M SKF +FL + FLL LL + P AYAARP P   +  P  +++    E  +SD EM MDE
Sbjct: 1  MPSKFFSFLFIFFLL-LLLHRPLAYAARPTPAAPTTIPTQELAE---ELKQSDGEMVMDE 60

Query: 61 RCHGVGEEECLIRRTLAAHLDYVYTQKHKP 90
           C GVGEEECL+RRTLAAHLDYVYTQKHKP
Sbjct: 61 NCDGVGEEECLMRRTLAAHLDYVYTQKHKP 86

[Close]

BLAST of CmoCh07G006420.1 vs. NCBI nr
Match: gi|255568659|ref|XP_002525303.1| (PREDICTED: phytosulfokines 3 [Ricinus communis])

HSP 1 Score: 81.3 bits (199), Expect = 9.7e-13
Identity = 41/78 (52.56%), Postives = 56/78 (71.79%), Query Frame = 1


Query: 12 IFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEECLI 71
          +FL+ LL  S   +A+RP P  S+ +      +QG+  +E  +EM++E C GVGEEECL+
Sbjct: 11 LFLVALLLCSTLIHASRPEPAFSNGSLPKNQQDQGVNQEEH-AEMVEESCEGVGEEECLM 70

Query: 72 RRTLAAHLDYVYTQKHKP 90
          RRTLAAH+DY+YTQKHKP
Sbjct: 71 RRTLAAHIDYIYTQKHKP 87

[Close]

BLAST of CmoCh07G006420.1 vs. NCBI nr
Match: gi|728847246|gb|KHG26689.1| (Phytosulfokines 3 -like protein [Gossypium arboreum])

HSP 1 Score: 81.3 bits (199), Expect = 9.7e-13
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1


Query: 9  LCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEE 68
          LC +F+  LL N   +YAARP PT+S     TQ  ++G+E ++ D+   DE C G+G+EE
Sbjct: 4  LCSLFIAALLFNFMQSYAARPEPTLS----LTQ--HEGVEAEKVDA---DENCEGIGKEE 63

Query: 69 CLIRRTLAAHLDYVYTQKHKP 90
          CL+RRTLAAH+DY+YTQ HKP
Sbjct: 64 CLMRRTLAAHVDYIYTQNHKP 75

[Close]

BLAST of CmoCh07G006420.1 vs. NCBI nr
Match: gi|823237627|ref|XP_012451457.1| (PREDICTED: phytosulfokines-like [Gossypium raimondii])

HSP 1 Score: 80.5 bits (197), Expect = 1.6e-12
Identity = 43/81 (53.09%), Postives = 58/81 (71.60%), Query Frame = 1


Query: 9  LCLIFLLHLLSNSPSAYAARPVPTVSSDAPATQISNQGLETDESDSEMMDERCHGVGEEE 68
          LC +F+  LL N   +YAARP PT+S     TQ  ++G+E ++ D+   DE C G+G+EE
Sbjct: 4  LCSLFIAALLFNFMLSYAARPEPTLS----LTQ--HEGVEAEKVDA---DENCEGIGKEE 63

Query: 69 CLIRRTLAAHLDYVYTQKHKP 90
          CL+RRTLAAH+DY+YTQ HKP
Sbjct: 64 CLMRRTLAAHVDYIYTQNHKP 75

The following BLAST results are available for this feature:

BLAST of CmoCh07G006420.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PSK3_ARATH	5.3e-11	44.87	Phytosulfokines 3 OS=Arabidopsis thaliana GN=PSK3 PE=2 SV=2	[more]
PSK_ASPOF	1.7e-09	48.31	Phytosulfokines OS=Asparagus officinalis GN=PSK PE=1 SV=1	[more]
PSK4_ORYSJ	5.5e-08	44.74	Phytosulfokines 4 OS=Oryza sativa subsp. japonica GN=PSK4 PE=1 SV=1	[more]
PSK5_ARATH	2.1e-07	45.98	Phytosulfokines 5 OS=Arabidopsis thaliana GN=PSK5 PE=2 SV=1	[more]
PSK2_ARATH	8.8e-06	42.50	Phytosulfokines 2 OS=Arabidopsis thaliana GN=PSK2 PE=2 SV=1	[more]

BLAST of CmoCh07G006420.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KLK0_CUCSA	6.9e-18	61.11	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G495850 PE=4 SV=1	[more]
B9SH34_RICCO	6.7e-13	52.56	Phytosulfokines, putative OS=Ricinus communis GN=RCOM_0581720 PE=4 SV=1	[more]
A0A0B0PQH6_GOSAR	6.7e-13	53.09	Phytosulfokines 3-like protein OS=Gossypium arboreum GN=F383_10569 PE=4 SV=1	[more]
A0A0D2SLH6_GOSRA	1.1e-12	53.09	Uncharacterized protein OS=Gossypium raimondii GN=B456_010G026700 PE=4 SV=1	[more]
W9QZQ5_9ROSA	9.7e-12	46.67	Phytosulfokines 3 OS=Morus notabilis GN=L484_003349 PE=4 SV=1	[more]

BLAST of CmoCh07G006420.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49780.1	3.0e-12	44.87	phytosulfokine 4 precursor	[more]
AT5G65870.1	1.2e-08	45.98	phytosulfokine 5 precursor	[more]
AT2G22860.1	4.9e-07	42.50	phytosulfokine 2 precursor	[more]
AT4G37720.1	3.2e-06	38.46	phytosulfokine 6 precursor	[more]

BLAST of CmoCh07G006420.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659079751\|ref\|XP_008440424.1\|	7.6e-18	64.13	PREDICTED: phytosulfokines 3 [Cucumis melo]	[more]
gi\|700193427\|gb\|KGN48631.1\|	1.0e-17	61.11	hypothetical protein Csa_6G495850 [Cucumis sativus]	[more]
gi\|255568659\|ref\|XP_002525303.1\|	9.7e-13	52.56	PREDICTED: phytosulfokines 3 [Ricinus communis]	[more]
gi\|728847246\|gb\|KHG26689.1\|	9.7e-13	53.09	Phytosulfokines 3 -like protein [Gossypium arboreum]	[more]
gi\|823237627\|ref\|XP_012451457.1\|	1.6e-12	53.09	PREDICTED: phytosulfokines-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR009438	Phytosulfokine

Vocabulary: **Cellular Component**
Term	Definition
GO:0005576	extracellular region

Vocabulary: **Molecular Function**
Term	Definition
GO:0008083	growth factor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008283	cell proliferation

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008283	cell proliferation
biological_process	GO:0040007	growth
biological_process	GO:0007165	signal transduction
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0008083	growth factor activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CmoCh07G006420	CmoCh07G006420	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006420.1	CmoCh07G006420.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006420.1.exon.2	CmoCh07G006420.1.exon.2	exon
CmoCh07G006420.1.exon.1	CmoCh07G006420.1.exon.1	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006420.1.five_prime_UTR.1	CmoCh07G006420.1.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006420.1.CDS.1	CmoCh07G006420.1.CDS.1	CDS
CmoCh07G006420.1.CDS.2	CmoCh07G006420.1.CDS.2	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CmoCh07G006420.1.three_prime_UTR.1	CmoCh07G006420.1.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009438	Phytosulfokine	PFAM	PF06404	PSK	coord: 24..88 score: 1.0
None	No IPR available	PANTHER	PTHR33285	FAMILY NOT NAMED	coord: 11..89 score: 6.2
None	No IPR available	PANTHER	PTHR33285:SF1	GROWTH FACTOR PROTEIN-RELATED	coord: 11..89 score: 6.2