CmoCh06G004880.1 (mRNA) Cucurbita moschata (Rifu)

NameCmoCh06G004880.1
TypemRNA
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPentatricopeptide repeat superfamily protein
LocationCmo_Chr06 : 2358797 .. 2360698 (+)
Sequence length1902
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA

mRNA sequence

ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA

Coding sequence (CDS)

ATGCTGAAATCCAAAAGCCAAATCATTTTCATCAACAATGGAAAGCTTCGATTTTCCTCCGCTTCAGCAACGACTGCAGTGAAAGAAGCTTCTATTTCTGTGCAGTTCAATGTGAATAACCACTCAAATGAACCAAATTCCTCAACCCAAGAATCTCAATCTTCTTTCCTTCTCTATTTTCACCCCAAACGATTTATAACTTTGCTTTTGAGTTGCAGAAATCTCTTTCAAATTAGGCAAGTCCATGGCCATATTGCTTCCAGTGGCGCATTTAGAAACCTCGCGATTGCTAACAAACTTCTCTTCTTATACGCCCAATATGGCGCCTTGGAGGATGCTCATGAACTGTTTGATGAAATGACTGAGAGAGATTCTTATAGCTGGAGTGTAATAGTTGGTGGGTATGCCAAAGTTAAGGATTTTTCTTCTTGTTTTTGGATGTTTAGGGAGCTTGTTCGTTGTGGGATGCCATTGGATAACTATACATTGCCAATTGTTATAAGGGCCTGCAGAGATTTGAAGGACCTGCAATTTGGTAGGGTTATTCATTGTGCCACTTCGAAATGTGGGCTGGATTTTGATCATTTTGTTTGTGCATCTCTTGTTGATATGTATGCTAGGTGTAAAGTGATTGAGGATGCCCGCCAACTGTTTGATAAAATGCCAAGGAGAGATCTTGTGACATGGACAGTGATGGTTGGTGCCTTGGCTGAATGTAGCAGTGCTGTTGAGTCATTGACTTTGTTTGATAGGATGAGGGATGAAGGTATTGTCCCTGATAAAGTGGCGTTGGTGACTGTTGTTTATGCCTGCGCAAAGTTGGGCGCCATGAATAAGGCCAGGGCAATTCATGACTATATTAATGGAACCAGATATGTTTTGGATGTAATTTTAGGGACAGCAATGATCGATATGTATGCGAAATGTGGGAGTGTTGATTTGGCAAGGGAGATTTTTGATCAGATGCAAGTGAAGAATGTGATTACATGGAGTGCCATGATTGCAGCCTATGGATATCACGGACAAGGCGGGAAAGCGCTCGAGTTATTCCCAATGATGTTAAGCAGCGGAATATTGCCAAATCGGATCACGTTTGTCTCGTTGTTGTATGCTTGTAGTCATGCTGGTCTAATTGAAGAGGGCCAGAGATTTTTTGCCTCAATGTGGGATGAGTACGGTGTAAGACCGGATGTAAAACACTATACTTGCATGGTTGATCTCCTAGGTCGAGCCGGGAGGTTCGATGAGGCCTTGGAATTGATAGAAAGCATGACAGTAGAGAAAGATGAAGGACTATGGGGAGCGTTACTGGGGGCATGTCGGATTCACCGACGTTTAGATTTGGCGAAAAGGGTGGCAAGCTCTCTTCTTGAGCTACAGCCGCAGAACCCAGGGCATTATGTATTGCTTTCAAACATATATGCAAATGCTGGCAAGTGGAAAGATATGGCAAAAACAAGAGATTTGATGACCAAATGTGGACTAAAGAAGATCCCTGGATGGACATGGATTGAGGTGGATGAAAAACTCTATCAATTCAGCGTTGGAGATAAAACACATCCGAGGTCGAGCGAGATCTATGAGATGCTGAAACGAGTGGGCGAGAAGCTTGAGTTGGCTGGCTATGTCCCGGATACAAACTATGTGCTGCATGATGTTGATGAGGAAGTAAAGCAAGGACTTCTATATGCACATAGTGAAAAGTTGGCCATTGCGTTTGGCTTAATAGTCATACCTGGAGACACTCCTATAAGGATTACAAAGAATCTTAGAGTTTGTGGTGACTGCCATACATTTTGCAAGTTTGTATCGTCGATTGAACGGAGAACGATCATACTACGTGACGCCAACCGGTTTCACCACTTCAAGGAAGGGGCTTGCTCATGCAGAGACTATTGGTAA
BLAST of CmoCh06G004880.1 vs. Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 486.1 bits (1250), Expect = 5.8e-136
Identity = 232/568 (40.85%), Postives = 357/568 (62.85%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I   +S R + +   +  H+  +G    + + N L+ +Y ++  L DAH+LFD+M +R+ 
Sbjct: 68  IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            SW+ ++  Y+K K       +   ++R  +  + YT   V+R+C  + D+   R++HC 
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCG 187

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL+ D FV ++L+D++A+    EDA  +FD+M   D + W  ++G  A+ S +  +
Sbjct: 188 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 247

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LF RM+  G + ++  L +V+ AC  L  +      H +I   +Y  D+IL  A++DM
Sbjct: 248 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDM 307

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           Y KCGS++ A  +F+QM+ ++VITWS MI+    +G   +AL+LF  M SSG  PN IT 
Sbjct: 308 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 367

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           V +L+ACSHAGL+E+G  +F SM   YG+ P  +HY CM+DLLG+AG+ D+A++L+  M 
Sbjct: 368 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 427

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
            E D   W  LLGACR+ R + LA+  A  ++ L P++ G Y LLSNIYAN+ KW  + +
Sbjct: 428 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 487

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            R  M   G+KK PG +WIEV+++++ F +GD +HP+  E+ + L ++  +L   GYVP+
Sbjct: 488 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 547

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           TN+VL D++ E  +  L  HSEKLA+AFGL+ +P +  IRI KNLR+CGDCH FCK  S 
Sbjct: 548 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 607

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 608 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CmoCh06G004880.1 vs. Swiss-Prot
Match: PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 1.7e-135
Identity = 233/588 (39.63%), Postives = 362/588 (61.56%), Query Frame = 1

Query: 79  RQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAK- 138
           +Q+HGH+   G   +L +   L+ +Y Q G LEDAH++FD+   RD  S++ ++ GYA  
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213

Query: 139 --------------VKD----------------FSSCFWMFRELVRCGMPLDNYTLPIVI 198
                         VKD                +     +F+++++  +  D  T+  V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273

Query: 199 RACRDLKDLQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLV 258
            AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++P +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333

Query: 259 TWTVMVGALAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYI 318
           +W  ++G     +   E+L LF  M   G  P+ V +++++ ACA LGA++  R IH YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 319 N-GTRYVLDV-ILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGK 378
           +   + V +   L T++IDMYAKCG ++ A ++F+ +  K++ +W+AMI  +  HG+   
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 379 ALELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMV 438
           + +LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513

Query: 439 DLLGRAGRFDEALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPG 498
           DLLG +G F EA E+I  M +E D  +W +LL AC++H  ++L +  A +L++++P+NPG
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573

Query: 499 HYVLLSNIYANAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSE 558
            YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HPR+ E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633

Query: 559 IYEMLKRVGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIR 618
           IY ML+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI     T + 
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693

Query: 619 ITKNLRVCGDCHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G004880.1 vs. Swiss-Prot
Match: PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2)

HSP 1 Score: 481.5 bits (1238), Expect = 1.4e-134
Identity = 234/561 (41.71%), Postives = 348/561 (62.03%), Query Frame = 1

Query: 74  NLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVG 133
           NL    ++H ++   G   NL + N L+ +Y++          F  M ++D  SW+ ++ 
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460

Query: 134 GYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDF 193
           GYA+         +FR++ +  M +D   L  ++RA   LK +   + IHC   + GL  
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-L 520

Query: 194 DHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMR 253
           D  +   LVD+Y +C+ +  A ++F+ +  +D+V+WT M+ + A   +  E++ LF RM 
Sbjct: 521 DTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV 580

Query: 254 DEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVD 313
           + G+  D VAL+ ++ A A L A+NK R IH Y+    + L+  +  A++DMYA CG + 
Sbjct: 581 ETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQ 640

Query: 314 LAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACS 373
            A+ +FD+++ K ++ +++MI AYG HG G  A+ELF  M    + P+ I+F++LLYACS
Sbjct: 641 SAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACS 700

Query: 374 HAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLW 433
           HAGL++EG+ F   M  EY + P  +HY C+VD+LGRA    EA E ++ M  E    +W
Sbjct: 701 HAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVW 760

Query: 434 GALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKC 493
            ALL ACR H   ++ +  A  LLEL+P+NPG+ VL+SN++A  G+W D+ K R  M   
Sbjct: 761 CALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKAS 820

Query: 494 GLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLEL-AGYVPDTNYVLHD 553
           G++K PG +WIE+D K+++F+  DK+HP S EIYE L  V  KLE   GYV DT +VLH+
Sbjct: 821 GMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYVADTKFVLHN 880

Query: 554 VDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTII 613
           VDE  K  +L+ HSE++AIA+GL+  P    +RITKNLRVC DCHTFCK VS + RR I+
Sbjct: 881 VDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLVSKLFRRDIV 940

Query: 614 LRDANRFHHFKEGACSCRDYW 634
           +RDANRFHHF+ G CSC D W
Sbjct: 941 MRDANRFHHFESGLCSCGDSW 960

BLAST of CmoCh06G004880.1 vs. Swiss-Prot
Match: PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)

HSP 1 Score: 479.2 bits (1232), Expect = 7.1e-134
Identity = 231/573 (40.31%), Postives = 356/573 (62.13%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQ---VHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTE 125
           ++LL +C       +   +H +    G    L ++NKL+ LYA++G L D  ++FD M  
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310

Query: 126 RDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVI 185
           RD  SW+ I+  Y   +       +F+E+    +  D  TL  +      L D++  R +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370

Query: 186 HCATSKCGLDFDHFVCAS-LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 245
              T + G   +     + +V MYA+  +++ AR +F+ +P  D+++W  ++   A+   
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430

Query: 246 AVESLTLFDRMRDEG-IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 305
           A E++ +++ M +EG I  ++   V+V+ AC++ GA+ +   +H  +      LDV + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490

Query: 306 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 365
           ++ DMY KCG ++ A  +F Q+   N + W+ +IA +G+HG G KA+ LF  ML  G+ P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550

Query: 366 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 425
           + ITFV+LL ACSH+GL++EGQ  F  M  +YG+ P +KHY CMVD+ GRAG+ + AL+ 
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610

Query: 426 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 485
           I+SM+++ D  +WGALL ACR+H  +DL K  +  L E++P++ G++VLLSN+YA+AGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670

Query: 486 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 545
           + + + R +    GL+K PGW+ +EVD K+  F  G++THP   E+Y  L  +  KL++ 
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

Query: 546 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 605
           GYVPD  +VL DV+++ K+ +L +HSE+LAIAF LI  P  T IRI KNLRVCGDCH+  
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790

Query: 606 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KF+S I  R II+RD+NRFHHFK G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CmoCh06G004880.1 vs. Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 3.5e-133
Identity = 232/617 (37.60%), Postives = 371/617 (60.13%), Query Frame = 1

Query: 28  KEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFITLLLSC---RNLFQIRQVHGH 87
           KE  +     V +  + P+  T E                L+L C    +L    +VH H
Sbjct: 58  KEGKLKQAIRVLSQESSPSQQTYE---------------LLILCCGHRSSLSDALRVHRH 117

Query: 88  IASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAKVKDFSSC 147
           I  +G+ ++  +A KL+ +Y+  G+++ A ++FD+  +R  Y W+ +             
Sbjct: 118 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 177

Query: 148 FWMFRELVRCGMPLDNYTLPIVIRACR----DLKDLQFGRVIHCATSKCGLDFDHFVCAS 207
             ++ ++ R G+  D +T   V++AC      +  L  G+ IH   ++ G     ++  +
Sbjct: 178 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 237

Query: 208 LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDE--GIV 267
           LVDMYAR   ++ A  +F  MP R++V+W+ M+   A+   A E+L  F  M  E     
Sbjct: 238 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 297

Query: 268 PDKVALVTVVYACAKLGAMNKARAIHDYI--NGTRYVLDVILGTAMIDMYAKCGSVDLAR 327
           P+ V +V+V+ ACA L A+ + + IH YI   G   +L VI  +A++ MY +CG +++ +
Sbjct: 298 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLEVGQ 357

Query: 328 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACSHAG 387
            +FD+M  ++V++W+++I++YG HG G KA+++F  ML++G  P  +TFVS+L ACSH G
Sbjct: 358 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 417

Query: 388 LIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLWGAL 447
           L+EEG+R F +MW ++G++P ++HY CMVDLLGRA R DEA ++++ M  E    +WG+L
Sbjct: 418 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 477

Query: 448 LGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKCGLK 507
           LG+CRIH  ++LA+R +  L  L+P+N G+YVLL++IYA A  W ++ + + L+   GL+
Sbjct: 478 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 537

Query: 508 KIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDVDEE 567
           K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T  VL++++ E
Sbjct: 538 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 597

Query: 568 VKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIILRDA 627
            K+ ++  HSEKLA+AFGLI      PIRITKNLR+C DCH F KF+S    + I++RD 
Sbjct: 598 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 657

Query: 628 NRFHHFKEGACSCRDYW 634
           NRFH FK G CSC DYW
Sbjct: 658 NRFHRFKNGVCSCGDYW 657

BLAST of CmoCh06G004880.1 vs. TrEMBL
Match: A0A0A0LE23_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G777570 PE=4 SV=1)

HSP 1 Score: 1025.4 bits (2650), Expect = 3.0e-296
Identity = 500/633 (78.99%), Postives = 554/633 (87.52%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK   IFIN GKLRFSS         AS+S QF+VN +SNEP   +QES+ S +L++
Sbjct: 1   MLKSKCHHIFINYGKLRFSS---------ASLSWQFDVNCNSNEPTPCSQESECSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
             KRF + LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLL++Y + GALEDA ELFD M
Sbjct: 61  DTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++R  YSWSVIVGGYAKV +F SCFWMFREL+R G PLD+Y+ P+VIRACRDLKDL+ GR
Sbjct: 121 SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+ HFVCA+LVDMYARCKV+EDA Q+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMR++GIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSV+ AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML SGILP
Sbjct: 301 AMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE M VEKDE LWGALLGACRIHR LDLA+RVA SLL+LQ Q PGHYVLLSNIYANAGKW
Sbjct: 421 IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
           +DMAKTRDLMTK GL+KIPG TWIEV EKLYQF VGDKTHPRS+EIY+MLKR+GEKLE+A
Sbjct: 481 EDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY PDTN VL+DVDEEVKQGLLY+HSEKLAIAFGL+V+P   PIRITKNLRVCGDCHTFC
Sbjct: 541 GYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE++TII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880.1 vs. TrEMBL
Match: V4T1L8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013825mg PE=4 SV=1)

HSP 1 Score: 889.8 bits (2298), Expect = 1.9e-255
Identity = 417/572 (72.90%), Postives = 485/572 (84.79%), Query Frame = 1

Query: 62  PKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMT 121
           PK FI+ LLSCRN+FQIRQVH  I + G   NL +ANKLL++YA + AL DAH LF+ M 
Sbjct: 15  PKFFISSLLSCRNIFQIRQVHAQIVAGGTLTNLIVANKLLYIYALHKALTDAHALFNGMK 74

Query: 122 ERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRV 181
           ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR+
Sbjct: 75  ERDSVSWSVMVGGFSKVADFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGRL 134

Query: 182 IHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 241
           IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  +
Sbjct: 135 IHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPTRDLVTWTVMIGACAESGN 194

Query: 242 AVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTA 301
           A ES  LF+RMR EG+V D  A+V+VVYACAKLG+++KAR +HD++   +++LDVILGTA
Sbjct: 195 ANESWDLFERMRGEGVVLDNTAMVSVVYACAKLGSIHKARLVHDFLTRNKFLLDVILGTA 254

Query: 302 MIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPN 361
           +IDMYAKCGS+D AREIF++M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LPN
Sbjct: 255 VIDMYAKCGSIDSAREIFERMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLPN 314

Query: 362 RITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELI 421
           RITFVSLLYACSH GL+EEG R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+LI
Sbjct: 315 RITFVSLLYACSHTGLVEEGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKLI 374

Query: 422 ESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWK 481
           ESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLE QPQNPGHYVLLSNIYANAG+W+
Sbjct: 375 ESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLERQPQNPGHYVLLSNIYANAGRWQ 434

Query: 482 DMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAG 541
           D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELAG
Sbjct: 435 DVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDSTHPQSEEIYRMLVTLSEKLELAG 494

Query: 542 YVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCK 601
           Y+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F K
Sbjct: 495 YIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFIK 554

Query: 602 FVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
            VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 555 HVSAITRRVIIVRDANRFHHFEGGACSCRDYW 586

BLAST of CmoCh06G004880.1 vs. TrEMBL
Match: A5C1S9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014227 PE=4 SV=1)

HSP 1 Score: 875.2 bits (2260), Expect = 4.9e-251
Identity = 412/560 (73.57%), Postives = 471/560 (84.11%), Query Frame = 1

Query: 74   NLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVG 133
            NL Q+RQVH   +  G  +NL +ANKL+  Y+ Y AL+DA+ LFD M  RDS SWSV+VG
Sbjct: 750  NLTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYRALDDAYGLFDGMCVRDSVSWSVMVG 809

Query: 134  GYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDF 193
            G+AKV D+ +CF  FREL+RCG   DNYTLP VIRACRDLK+LQ GR+IH    K GLD 
Sbjct: 810  GFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDL 869

Query: 194  DHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMR 253
            DHFVCA+LVDMY +C+ IEDAR LFDKM  RDLVTWTVM+G  AEC +A ESL LFD+MR
Sbjct: 870  DHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFDKMR 929

Query: 254  DEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVD 313
            +EG+VPDKVA+VTVV+ACAKLGAM+KAR I DYI   ++ LDVILGTAMIDM+AKCG V+
Sbjct: 930  EEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCGCVE 989

Query: 314  LAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACS 373
             AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMML SGILPN+IT VSLLYACS
Sbjct: 990  SAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACS 1049

Query: 374  HAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLW 433
            HAGL+EEG RFF+ MW++Y VR DVKHYTC+VDLLGRAGR DEAL+LI SMT EKDEGLW
Sbjct: 1050 HAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDEGLW 1109

Query: 434  GALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKC 493
            GA LGACR H+ + LA++ A+SLLELQPQNPGHY+LLSNIYANAG+W+D+AK RDLM++ 
Sbjct: 1110 GAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLMSQR 1169

Query: 494  GLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDV 553
             LKKIPGWTWIEVD K +QFSVGD THPRS EIYEMLK +G KLEL GYVPDTN+VLHDV
Sbjct: 1170 RLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVLHDV 1229

Query: 554  DEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIIL 613
            DEE+K G+LY HSEKLAIAFGLI  P  TPIRI KNLRVCGDCHTFCK VS+I  R II+
Sbjct: 1230 DEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRVIIV 1289

Query: 614  RDANRFHHFKEGACSCRDYW 634
            RDANRFHHFKEGACSC DYW
Sbjct: 1290 RDANRFHHFKEGACSCGDYW 1309

BLAST of CmoCh06G004880.1 vs. TrEMBL
Match: A0A0D2MF68_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G238700 PE=4 SV=1)

HSP 1 Score: 865.5 bits (2235), Expect = 3.9e-248
Identity = 418/638 (65.52%), Postives = 499/638 (78.21%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRF-----SSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSS 60
           MLK      F+     RF     S  +AT   +E S+  Q     H+ +P     ES  S
Sbjct: 25  MLKLTKTQTFLTANHERFRLLPLSQLAATVDTQETSLKSQ----THTQKP----LESHPS 84

Query: 61  FLLYFHPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHE 120
             L+  PK F+++LL+C+N+FQI+Q H  I ++G   NL ++NKLL++Y Q+ A+++AH 
Sbjct: 85  --LHIDPKYFVSVLLNCKNIFQIKQAHAQIVANGLLTNLFVSNKLLYIYVQHKAIDEAHA 144

Query: 121 LFDEMTERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKD 180
            F  M E+D  SWSV+VGG+AK  DF +CF  F+EL RC +  DNYTLP V+R CRD  D
Sbjct: 145 FFGGMREKDPVSWSVMVGGFAKDGDFVNCFRTFKELTRCSVQPDNYTLPFVLRVCRDRMD 204

Query: 181 LQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGA 240
           L  G ++H    K GL +DHFVCA+LVDMYA+C+VI+DAR+LFD M ++DLVTWTVM+  
Sbjct: 205 LLMGSLVHGVVLKSGLSWDHFVCAALVDMYAKCRVIDDARKLFDDMHKKDLVTWTVMIDG 264

Query: 241 LAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLD 300
            AEC +A ESL LFD MR+EGIVPDK+ +VTVV AC+KLGAM+KAR +HDYI   ++ L 
Sbjct: 265 YAECGNANESLVLFDWMREEGIVPDKITMVTVVNACSKLGAMHKARFVHDYICSMKFSLT 324

Query: 301 VILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLS 360
           VILGTAMIDMYAKCGSVD AREIFD M+ KNVI+WS MIAAYGYHGQG KAL+LFPMML+
Sbjct: 325 VILGTAMIDMYAKCGSVDFAREIFDGMREKNVISWSVMIAAYGYHGQGKKALDLFPMMLN 384

Query: 361 SGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFD 420
            GI+PNRITFVSLLYACSHAGL++EG   F  MWD+YGV+PDVKH TCMVDLLGRAGR D
Sbjct: 385 CGIMPNRITFVSLLYACSHAGLVDEGFELFNIMWDKYGVKPDVKHCTCMVDLLGRAGRLD 444

Query: 421 EALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYA 480
           EAL+LIE+MTVEKDEGLW A L ACRIH+ ++LA+  A SLLELQPQNPGHYVLLSN+YA
Sbjct: 445 EALKLIENMTVEKDEGLWSAFLAACRIHKHVELAEWAAKSLLELQPQNPGHYVLLSNVYA 504

Query: 481 NAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGE 540
           NAG W+DMAK R+LMTK  LKKIPGWTWIEVD K++QFSVGDK+HP S EIY +LK + E
Sbjct: 505 NAGMWEDMAKVRNLMTKGNLKKIPGWTWIEVDNKIHQFSVGDKSHPLSKEIYGLLKSLIE 564

Query: 541 KLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGD 600
           KLELAGYVPDTN+VLHDVDEEVK G+LY HSEKLAI FGLI  P  TPIRITKNLRVCGD
Sbjct: 565 KLELAGYVPDTNFVLHDVDEEVKVGMLYTHSEKLAITFGLIATPEGTPIRITKNLRVCGD 624

Query: 601 CHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           CHTF KFVS+I +R+II+RD+NRFHHF EGACSC DYW
Sbjct: 625 CHTFIKFVSAITKRSIIVRDSNRFHHFIEGACSCGDYW 652

BLAST of CmoCh06G004880.1 vs. TrEMBL
Match: I1JGM4_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_02G201800 PE=4 SV=2)

HSP 1 Score: 857.8 bits (2215), Expect = 8.2e-246
Identity = 407/568 (71.65%), Postives = 479/568 (84.33%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I LLL CRN+F IRQVH H+ ++G  ++L IANKLL+ YAQ+ A++DA+ LFD +T RDS
Sbjct: 7   IDLLLRCRNVFHIRQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGLTMRDS 66

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            +WSV+VGG+AK  D + C+  FREL+RCG+  DNYTLP VIR CRD  DLQ GRVIH  
Sbjct: 67  KTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDV 126

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL  DHFVCASLVDMYA+C V+EDA++LF++M  +DLVTWTVM+GA A+C+ A ES
Sbjct: 127 VLKHGLLSDHFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYADCN-AYES 186

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LFDRMR+EG+VPDKVA+VTVV ACAKLGAM++AR  +DYI    + LDVILGTAMIDM
Sbjct: 187 LVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDM 246

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           YAKCGSV+ ARE+FD+M+ KNVI+WSAMIAAYGYHG+G  A++LF MMLS  ILPNR+TF
Sbjct: 247 YAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTF 306

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           VSLLYACSHAGLIEEG RFF SMW+E+ VRPDVKHYTCMVDLLGRAGR DEAL LIE+MT
Sbjct: 307 VSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMT 366

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
           VEKDE LW ALLGACRIH +++LA++ A+SLLELQPQNPGHYVLLSNIYA AGKW+ +AK
Sbjct: 367 VEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAK 426

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            RD+MT+  LKKIPGWTWIEVD K YQFSVGD++HP+S EIYEML  + +KLE+AGYVPD
Sbjct: 427 FRDMMTQRKLKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPD 486

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           T++VL DV+EEVKQ +LY HSEKLAIAFGLI IP   PIRI+KNLRVCGDCHTF K VSS
Sbjct: 487 TDFVLQDVEEEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSS 546

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           I RR+II+RDANRFHHF +G CSC DYW
Sbjct: 547 IMRRSIIVRDANRFHHFNDGTCSCGDYW 573

BLAST of CmoCh06G004880.1 vs. TAIR10
Match: AT2G03880.1 (AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 486.1 bits (1250), Expect = 3.3e-137
Identity = 232/568 (40.85%), Postives = 357/568 (62.85%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDS 125
           I   +S R + +   +  H+  +G    + + N L+ +Y ++  L DAH+LFD+M +R+ 
Sbjct: 68  IKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNV 127

Query: 126 YSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCA 185
            SW+ ++  Y+K K       +   ++R  +  + YT   V+R+C  + D+   R++HC 
Sbjct: 128 ISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCG 187

Query: 186 TSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVES 245
             K GL+ D FV ++L+D++A+    EDA  +FD+M   D + W  ++G  A+ S +  +
Sbjct: 188 IIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVA 247

Query: 246 LTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDM 305
           L LF RM+  G + ++  L +V+ AC  L  +      H +I   +Y  D+IL  A++DM
Sbjct: 248 LELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI--VKYDQDLILNNALVDM 307

Query: 306 YAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITF 365
           Y KCGS++ A  +F+QM+ ++VITWS MI+    +G   +AL+LF  M SSG  PN IT 
Sbjct: 308 YCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITI 367

Query: 366 VSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMT 425
           V +L+ACSHAGL+E+G  +F SM   YG+ P  +HY CM+DLLG+AG+ D+A++L+  M 
Sbjct: 368 VGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEME 427

Query: 426 VEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAK 485
            E D   W  LLGACR+ R + LA+  A  ++ L P++ G Y LLSNIYAN+ KW  + +
Sbjct: 428 CEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEE 487

Query: 486 TRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPD 545
            R  M   G+KK PG +WIEV+++++ F +GD +HP+  E+ + L ++  +L   GYVP+
Sbjct: 488 IRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPE 547

Query: 546 TNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSS 605
           TN+VL D++ E  +  L  HSEKLA+AFGL+ +P +  IRI KNLR+CGDCH FCK  S 
Sbjct: 548 TNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASK 607

Query: 606 IERRTIILRDANRFHHFKEGACSCRDYW 634
           +E R+I++RD  R+HHF++G CSC DYW
Sbjct: 608 LEIRSIVIRDPIRYHHFQDGKCSCGDYW 630

BLAST of CmoCh06G004880.1 vs. TAIR10
Match: AT1G08070.1 (AT1G08070.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 484.6 bits (1246), Expect = 9.5e-137
Identity = 233/588 (39.63%), Postives = 362/588 (61.56%), Query Frame = 1

Query: 79  RQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAK- 138
           +Q+HGH+   G   +L +   L+ +Y Q G LEDAH++FD+   RD  S++ ++ GYA  
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213

Query: 139 --------------VKD----------------FSSCFWMFRELVRCGMPLDNYTLPIVI 198
                         VKD                +     +F+++++  +  D  T+  V+
Sbjct: 214 GYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVV 273

Query: 199 RACRDLKDLQFGRVIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLV 258
            AC     ++ GR +H      G   +  +  +L+D+Y++C  +E A  LF+++P +D++
Sbjct: 274 SACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVI 333

Query: 259 TWTVMVGALAECSSAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYI 318
           +W  ++G     +   E+L LF  M   G  P+ V +++++ ACA LGA++  R IH YI
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393

Query: 319 N-GTRYVLDV-ILGTAMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGK 378
           +   + V +   L T++IDMYAKCG ++ A ++F+ +  K++ +W+AMI  +  HG+   
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADA 453

Query: 379 ALELFPMMLSSGILPNRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMV 438
           + +LF  M   GI P+ ITFV LL ACSH+G+++ G+  F +M  +Y + P ++HY CM+
Sbjct: 454 SFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMI 513

Query: 439 DLLGRAGRFDEALELIESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPG 498
           DLLG +G F EA E+I  M +E D  +W +LL AC++H  ++L +  A +L++++P+NPG
Sbjct: 514 DLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPG 573

Query: 499 HYVLLSNIYANAGKWKDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSE 558
            YVLLSNIYA+AG+W ++AKTR L+   G+KK+PG + IE+D  +++F +GDK HPR+ E
Sbjct: 574 SYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNRE 633

Query: 559 IYEMLKRVGEKLELAGYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIR 618
           IY ML+ +   LE AG+VPDT+ VL +++EE K+G L  HSEKLAIAFGLI     T + 
Sbjct: 634 IYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLT 693

Query: 619 ITKNLRVCGDCHTFCKFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           I KNLRVC +CH   K +S I +R II RD  RFHHF++G CSC DYW
Sbjct: 694 IVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741

BLAST of CmoCh06G004880.1 vs. TAIR10
Match: AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 479.2 bits (1232), Expect = 4.0e-135
Identity = 231/573 (40.31%), Postives = 356/573 (62.13%), Query Frame = 1

Query: 66  ITLLLSCRNLFQIRQ---VHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTE 125
           ++LL +C       +   +H +    G    L ++NKL+ LYA++G L D  ++FD M  
Sbjct: 251 VSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYV 310

Query: 126 RDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVI 185
           RD  SW+ I+  Y   +       +F+E+    +  D  TL  +      L D++  R +
Sbjct: 311 RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSV 370

Query: 186 HCATSKCGLDFDHFVCAS-LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 245
              T + G   +     + +V MYA+  +++ AR +F+ +P  D+++W  ++   A+   
Sbjct: 371 QGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGF 430

Query: 246 AVESLTLFDRMRDEG-IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 305
           A E++ +++ M +EG I  ++   V+V+ AC++ GA+ +   +H  +      LDV + T
Sbjct: 431 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 490

Query: 306 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 365
           ++ DMY KCG ++ A  +F Q+   N + W+ +IA +G+HG G KA+ LF  ML  G+ P
Sbjct: 491 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 550

Query: 366 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 425
           + ITFV+LL ACSH+GL++EGQ  F  M  +YG+ P +KHY CMVD+ GRAG+ + AL+ 
Sbjct: 551 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 610

Query: 426 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 485
           I+SM+++ D  +WGALL ACR+H  +DL K  +  L E++P++ G++VLLSN+YA+AGKW
Sbjct: 611 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKW 670

Query: 486 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 545
           + + + R +    GL+K PGW+ +EVD K+  F  G++THP   E+Y  L  +  KL++ 
Sbjct: 671 EGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMI 730

Query: 546 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 605
           GYVPD  +VL DV+++ K+ +L +HSE+LAIAF LI  P  T IRI KNLRVCGDCH+  
Sbjct: 731 GYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVT 790

Query: 606 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KF+S I  R II+RD+NRFHHFK G CSC DYW
Sbjct: 791 KFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823

BLAST of CmoCh06G004880.1 vs. TAIR10
Match: AT3G46790.1 (AT3G46790.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 476.9 bits (1226), Expect = 2.0e-134
Identity = 232/617 (37.60%), Postives = 371/617 (60.13%), Query Frame = 1

Query: 28  KEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFITLLLSC---RNLFQIRQVHGH 87
           KE  +     V +  + P+  T E                L+L C    +L    +VH H
Sbjct: 58  KEGKLKQAIRVLSQESSPSQQTYE---------------LLILCCGHRSSLSDALRVHRH 117

Query: 88  IASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYAKVKDFSSC 147
           I  +G+ ++  +A KL+ +Y+  G+++ A ++FD+  +R  Y W+ +             
Sbjct: 118 ILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEV 177

Query: 148 FWMFRELVRCGMPLDNYTLPIVIRACR----DLKDLQFGRVIHCATSKCGLDFDHFVCAS 207
             ++ ++ R G+  D +T   V++AC      +  L  G+ IH   ++ G     ++  +
Sbjct: 178 LGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTT 237

Query: 208 LVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDE--GIV 267
           LVDMYAR   ++ A  +F  MP R++V+W+ M+   A+   A E+L  F  M  E     
Sbjct: 238 LVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSS 297

Query: 268 PDKVALVTVVYACAKLGAMNKARAIHDYI--NGTRYVLDVILGTAMIDMYAKCGSVDLAR 327
           P+ V +V+V+ ACA L A+ + + IH YI   G   +L VI  +A++ MY +CG +++ +
Sbjct: 298 PNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVI--SALVTMYGRCGKLEVGQ 357

Query: 328 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVSLLYACSHAG 387
            +FD+M  ++V++W+++I++YG HG G KA+++F  ML++G  P  +TFVS+L ACSH G
Sbjct: 358 RVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEG 417

Query: 388 LIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVEKDEGLWGAL 447
           L+EEG+R F +MW ++G++P ++HY CMVDLLGRA R DEA ++++ M  E    +WG+L
Sbjct: 418 LVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSL 477

Query: 448 LGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTKCGLK 507
           LG+CRIH  ++LA+R +  L  L+P+N G+YVLL++IYA A  W ++ + + L+   GL+
Sbjct: 478 LGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQ 537

Query: 508 KIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHDVDEE 567
           K+PG  W+EV  K+Y F   D+ +P   +I+  L ++ E ++  GY+P T  VL++++ E
Sbjct: 538 KLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETE 597

Query: 568 VKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTIILRDA 627
            K+ ++  HSEKLA+AFGLI      PIRITKNLR+C DCH F KF+S    + I++RD 
Sbjct: 598 EKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDV 657

Query: 628 NRFHHFKEGACSCRDYW 634
           NRFH FK G CSC DYW
Sbjct: 658 NRFHRFKNGVCSCGDYW 657

BLAST of CmoCh06G004880.1 vs. TAIR10
Match: AT2G33760.1 (AT2G33760.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 475.3 bits (1222), Expect = 5.8e-134
Identity = 231/561 (41.18%), Postives = 347/561 (61.85%), Query Frame = 1

Query: 77  QIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYSWSVIVGGYA 136
           Q++QVH H+  +G  R+ ++  KL+ L     A+   H LF  +   D + ++ ++   +
Sbjct: 24  QLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTS 83

Query: 137 KVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATSKCGLDFDHF 196
           K++    C   +R ++   +   NYT   VI++C DL  L+ G+ +HC     G   D +
Sbjct: 84  KLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTY 143

Query: 197 VCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLTLFDRMRDEG 256
           V A+LV  Y++C  +E ARQ+FD+MP + +V W  +V    +   A E++ +F +MR+ G
Sbjct: 144 VQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESG 203

Query: 257 IVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYAKCGSVDLAR 316
             PD    V+++ ACA+ GA++    +H YI      L+V LGTA+I++Y++CG V  AR
Sbjct: 204 FEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAR 263

Query: 317 EIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSS-GILPNRITFVSLLYACSHA 376
           E+FD+M+  NV  W+AMI+AYG HG G +A+ELF  M    G +PN +TFV++L AC+HA
Sbjct: 264 EVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHA 323

Query: 377 GLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTV---EKDEGL 436
           GL+EEG+  +  M   Y + P V+H+ CMVD+LGRAG  DEA + I  +          L
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPAL 383

Query: 437 WGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTRDLMTK 496
           W A+LGAC++HR  DL   +A  L+ L+P NPGH+V+LSNIYA +GK  +++  RD M +
Sbjct: 384 WTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMR 443

Query: 497 CGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTNYVLHD 556
             L+K  G++ IEV+ K Y FS+GD++H  + EIY  L+ +  + +  GY P +  V+H 
Sbjct: 444 NNLRKQVGYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAPVSEEVMHQ 503

Query: 557 VDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIERRTII 616
           V+EE K+  L  HSEKLA+AFGL+    D  I I KNLR+C DCH+  K++S +  R I 
Sbjct: 504 VEEEEKEFALRYHSEKLAVAFGLLKTV-DVAITIVKNLRICEDCHSAFKYISIVSNRQIT 563

Query: 617 LRDANRFHHFKEGACSCRDYW 634
           +RD  RFHHF+ G+CSC DYW
Sbjct: 564 VRDKLRFHHFQNGSCSCLDYW 583

BLAST of CmoCh06G004880.1 vs. NCBI nr
Match: gi|659084389|ref|XP_008442861.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis melo])

HSP 1 Score: 1067.0 bits (2758), Expect = 1.3e-308
Identity = 520/633 (82.15%), Postives = 560/633 (88.47%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK Q IFIN+GKLRFSS         AS+S QF+VN +SNEP   TQES+SS +L++
Sbjct: 1   MLKSKCQHIFINHGKLRFSS---------ASLSWQFDVNCNSNEPTPCTQESESSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
            PKRF   LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLLFLY + GALEDA ELFD M
Sbjct: 61  DPKRFRNSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLFLYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++RD YSWS+IVGGYAKV DF SCFWMFREL+RCG PLD+Y  PIVIRACRDLKDL+ GR
Sbjct: 121 SKRDPYSWSIIVGGYAKVGDFFSCFWMFRELLRCGTPLDDYNAPIVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+  FVCASLVDMYARCKVIEDARQ+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGQFVCASLVDMYARCKVIEDARQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMRDEGIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLAFFDRMRDEGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSVD AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML  GILP
Sbjct: 301 AMIDMYAKCGSVDSARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLGCGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE MTVEKDE LWGALLGACRIHRRLDLA+RVA+SL +LQ QNPGHYVLLSNIYANAGKW
Sbjct: 421 IEGMTVEKDEALWGALLGACRIHRRLDLAERVATSLHKLQSQNPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
            DMAK RDLMTK GL+KIPGWTWIEV+EKLYQF VGDKTHPRSSEIY+MLKR+GEKLELA
Sbjct: 481 DDMAKIRDLMTKSGLRKIPGWTWIEVNEKLYQFGVGDKTHPRSSEIYKMLKRIGEKLELA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY+PDTNY LHDVDEEVKQGLLYAHSEKLAIAFGL+VI    PIRITKNLRVCGDCHTFC
Sbjct: 541 GYLPDTNYALHDVDEEVKQGLLYAHSEKLAIAFGLLVISQGYPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE+RTII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSFIEQRTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880.1 vs. NCBI nr
Match: gi|449462994|ref|XP_004149219.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis sativus])

HSP 1 Score: 1025.4 bits (2650), Expect = 4.2e-296
Identity = 500/633 (78.99%), Postives = 554/633 (87.52%), Query Frame = 1

Query: 1   MLKSKSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYF 60
           MLKSK   IFIN GKLRFSS         AS+S QF+VN +SNEP   +QES+ S +L++
Sbjct: 1   MLKSKCHHIFINYGKLRFSS---------ASLSWQFDVNCNSNEPTPCSQESECSHVLHY 60

Query: 61  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 120
             KRF + LLSCRNLFQ+RQVH  IA++GAFRNLA+ANKLL++Y + GALEDA ELFD M
Sbjct: 61  DTKRFRSSLLSCRNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQELFDGM 120

Query: 121 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 180
           ++R  YSWSVIVGGYAKV +F SCFWMFREL+R G PLD+Y+ P+VIRACRDLKDL+ GR
Sbjct: 121 SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGR 180

Query: 181 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 240
           +IHC T KCGLD+ HFVCA+LVDMYARCKV+EDA Q+F KM +RDL TWTVM+GALAE  
Sbjct: 181 LIHCITLKCGLDYGHFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESG 240

Query: 241 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 300
             VESL  FDRMR++GIVPDKVALVTVVYACAKLGAMNKA+AIH YINGT Y LDVILGT
Sbjct: 241 VPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGT 300

Query: 301 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 360
           AMIDMYAKCGSV+ AR IFD+MQV+NVITWSAMIAAYGYHGQG KALELFPMML SGILP
Sbjct: 301 AMIDMYAKCGSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 360

Query: 361 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 420
           NRITFVSLLYACSHAGLIEEGQRFF+SMWDEYGV PDVKHYTCMVDLLGRAGR DEALE+
Sbjct: 361 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEM 420

Query: 421 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 480
           IE M VEKDE LWGALLGACRIHR LDLA+RVA SLL+LQ Q PGHYVLLSNIYANAGKW
Sbjct: 421 IEGMPVEKDEVLWGALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKW 480

Query: 481 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 540
           +DMAKTRDLMTK GL+KIPG TWIEV EKLYQF VGDKTHPRS+EIY+MLKR+GEKLE+A
Sbjct: 481 EDMAKTRDLMTKGGLRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVA 540

Query: 541 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 600
           GY PDTN VL+DVDEEVKQGLLY+HSEKLAIAFGL+V+P   PIRITKNLRVCGDCHTFC
Sbjct: 541 GYHPDTNDVLYDVDEEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFC 600

Query: 601 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           KFVS IE++TII+RDA RFHHFKEG CSCRDYW
Sbjct: 601 KFVSLIEQKTIIVRDAKRFHHFKEGVCSCRDYW 624

BLAST of CmoCh06G004880.1 vs. NCBI nr
Match: gi|731400928|ref|XP_010654106.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vinifera])

HSP 1 Score: 908.3 bits (2346), Expect = 7.6e-261
Identity = 435/626 (69.49%), Postives = 511/626 (81.63%), Query Frame = 1

Query: 8   IIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQSSFLLYFHPKRFIT 67
           +I + NG+L F +A +   + E+ I  Q    +  N  N   + S+  FL   +PK +++
Sbjct: 9   LIALRNGRLDFCTAPSVFPIVESVIETQIRQTS-LNLFNRVEESSKFHFLQRLNPKFYLS 68

Query: 68  LLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMTERDSYS 127
            L++CRNL Q+RQVH   +  G  +NL +ANKL+  Y+ Y AL+DA+ LFD M  RDS S
Sbjct: 69  ALVNCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYGLFDGMCVRDSVS 128

Query: 128 WSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRVIHCATS 187
           WSV+VGG+AKV D+ +CF  FREL+RCG   DNYTLP VIRACRDLK+LQ GR+IH    
Sbjct: 129 WSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVY 188

Query: 188 KCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSSAVESLT 247
           K GLD DHFVCA+LVDMY +C+ IEDAR LFDKMP RDLVTWTVM+G  AEC +A ESL 
Sbjct: 189 KFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMPERDLVTWTVMIGGYAECGNANESLV 248

Query: 248 LFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTAMIDMYA 307
           LFD+MR+EG+VPDKVA+VTVV+ACAKLGAM+KAR I DYI   ++ LDVILGTAMIDM+A
Sbjct: 249 LFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHA 308

Query: 308 KCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPNRITFVS 367
           KCG V+ AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMML SGILPN+IT VS
Sbjct: 309 KCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVS 368

Query: 368 LLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELIESMTVE 427
           LLYACSHAGL+EEG RFF+ MW++Y VR DVKHYTC+VDLLGRAGR DEAL+LIESMTVE
Sbjct: 369 LLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVE 428

Query: 428 KDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWKDMAKTR 487
           KDEGLWGA LGACR H+ + LA++ A+SLLELQPQNPGHY+LLSNIYANAG+W+D+AKTR
Sbjct: 429 KDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTR 488

Query: 488 DLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAGYVPDTN 547
           DLM++  LKKIPGWTWIEVD K +QFSVGD THPRS EIYEMLK +G KLEL GYVPDTN
Sbjct: 489 DLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTN 548

Query: 548 YVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCKFVSSIE 607
           +VLHDVDEE+K G+LY+HSEKLAIAFGLI  P  TPIRI KNLRVCGDCHTFCK VS+I 
Sbjct: 549 FVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAIT 608

Query: 608 RRTIILRDANRFHHFKEGACSCRDYW 634
            R II+RDANRFHHFKEGACSC DYW
Sbjct: 609 GRVIIVRDANRFHHFKEGACSCGDYW 633

BLAST of CmoCh06G004880.1 vs. NCBI nr
Match: gi|985453519|ref|XP_015386876.1| (PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Citrus sinensis])

HSP 1 Score: 891.0 bits (2301), Expect = 1.2e-255
Identity = 430/633 (67.93%), Postives = 504/633 (79.62%), Query Frame = 1

Query: 5   KSQIIFINNGKLRFSSASATTAVKEASISVQFNVNNHSNEPNSSTQESQS----SFLLYF 64
           K   I   + K+RF S+S T A+           + H   P +     Q+     F    
Sbjct: 6   KHGFILSTSAKIRFFSSSTTAAIP-------LEPHGHEQNPINPRAPMQTVPDCQFTRSV 65

Query: 65  HPKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEM 124
            PK  I+ LLSCRN+FQIRQVH  I +SG   NL +ANKLL++YA + AL DAH LF+ M
Sbjct: 66  DPKFIISSLLSCRNIFQIRQVHAQIVASGTLTNLIVANKLLYIYALHKALTDAHALFNGM 125

Query: 125 TERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGR 184
            ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR
Sbjct: 126 KERDSVSWSVMVGGFSKVGDFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGR 185

Query: 185 VIHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECS 244
           +IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  
Sbjct: 186 LIHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPSRDLVTWTVMMGACAESG 245

Query: 245 SAVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGT 304
           +A ES  LF+RMR  G+V D  A+V+VVYACAKLG++ KAR +HD++   +++LDVILGT
Sbjct: 246 NANESWDLFERMRGAGVVLDNTAMVSVVYACAKLGSIQKARLVHDFLTRNKFLLDVILGT 305

Query: 305 AMIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILP 364
           A+IDMYAKCGS+D AREIFD+M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LP
Sbjct: 306 AVIDMYAKCGSIDSAREIFDRMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLP 365

Query: 365 NRITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALEL 424
           NRITFVSLLYACSH GL+E+G R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+L
Sbjct: 366 NRITFVSLLYACSHTGLVEQGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKL 425

Query: 425 IESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKW 484
           IESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLELQPQNPGHYVLLSNIYANAG+W
Sbjct: 426 IESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLELQPQNPGHYVLLSNIYANAGRW 485

Query: 485 KDMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELA 544
           +D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELA
Sbjct: 486 QDVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDTTHPQSEEIYRMLVTLSEKLELA 545

Query: 545 GYVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFC 604
           GY+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F 
Sbjct: 546 GYIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFI 605

Query: 605 KFVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
           K VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 606 KHVSAITRRVIIVRDANRFHHFEGGACSCRDYW 631

BLAST of CmoCh06G004880.1 vs. NCBI nr
Match: gi|567875143|ref|XP_006430161.1| (hypothetical protein CICLE_v10013825mg [Citrus clementina])

HSP 1 Score: 889.8 bits (2298), Expect = 2.8e-255
Identity = 417/572 (72.90%), Postives = 485/572 (84.79%), Query Frame = 1

Query: 62  PKRFITLLLSCRNLFQIRQVHGHIASSGAFRNLAIANKLLFLYAQYGALEDAHELFDEMT 121
           PK FI+ LLSCRN+FQIRQVH  I + G   NL +ANKLL++YA + AL DAH LF+ M 
Sbjct: 15  PKFFISSLLSCRNIFQIRQVHAQIVAGGTLTNLIVANKLLYIYALHKALTDAHALFNGMK 74

Query: 122 ERDSYSWSVIVGGYAKVKDFSSCFWMFRELVRCGMPLDNYTLPIVIRACRDLKDLQFGRV 181
           ERDS SWSV+VGG++KV DF +CF  FRE +RCGM LD+YTLP VIRACRD KD+  GR+
Sbjct: 75  ERDSVSWSVMVGGFSKVADFINCFETFREFIRCGMQLDSYTLPFVIRACRDRKDIVMGRL 134

Query: 182 IHCATSKCGLDFDHFVCASLVDMYARCKVIEDARQLFDKMPRRDLVTWTVMVGALAECSS 241
           IH    K GLD D FVCA+LVDMYA+CKVI+DARQLFD+MP RDLVTWTVM+GA AE  +
Sbjct: 135 IHDIVLKSGLDIDQFVCAALVDMYAKCKVIDDARQLFDQMPTRDLVTWTVMIGACAESGN 194

Query: 242 AVESLTLFDRMRDEGIVPDKVALVTVVYACAKLGAMNKARAIHDYINGTRYVLDVILGTA 301
           A ES  LF+RMR EG+V D  A+V+VVYACAKLG+++KAR +HD++   +++LDVILGTA
Sbjct: 195 ANESWDLFERMRGEGVVLDNTAMVSVVYACAKLGSIHKARLVHDFLTRNKFLLDVILGTA 254

Query: 302 MIDMYAKCGSVDLAREIFDQMQVKNVITWSAMIAAYGYHGQGGKALELFPMMLSSGILPN 361
           +IDMYAKCGS+D AREIF++M+ KNVI+WSAMIAAYGYHGQG KAL+LFPMMLSS +LPN
Sbjct: 255 VIDMYAKCGSIDSAREIFERMRQKNVISWSAMIAAYGYHGQGKKALDLFPMMLSSRVLPN 314

Query: 362 RITFVSLLYACSHAGLIEEGQRFFASMWDEYGVRPDVKHYTCMVDLLGRAGRFDEALELI 421
           RITFVSLLYACSH GL+EEG R F+SMWD++ VRPDVKHYTCMVDLLGRAGR DEAL+LI
Sbjct: 315 RITFVSLLYACSHTGLVEEGLRLFSSMWDDFAVRPDVKHYTCMVDLLGRAGRLDEALKLI 374

Query: 422 ESMTVEKDEGLWGALLGACRIHRRLDLAKRVASSLLELQPQNPGHYVLLSNIYANAGKWK 481
           ESM+VEKDEGLWGALLGACRIH+ +DLA+  A SLLE QPQNPGHYVLLSNIYANAG+W+
Sbjct: 375 ESMSVEKDEGLWGALLGACRIHKNVDLAEMAAKSLLERQPQNPGHYVLLSNIYANAGRWQ 434

Query: 482 DMAKTRDLMTKCGLKKIPGWTWIEVDEKLYQFSVGDKTHPRSSEIYEMLKRVGEKLELAG 541
           D+AK RDLMT+  LKKIPGWTWIEV+ K++QFSVGD THP+S EIY ML  + EKLELAG
Sbjct: 435 DVAKIRDLMTRRRLKKIPGWTWIEVENKIHQFSVGDSTHPQSEEIYRMLVTLSEKLELAG 494

Query: 542 YVPDTNYVLHDVDEEVKQGLLYAHSEKLAIAFGLIVIPGDTPIRITKNLRVCGDCHTFCK 601
           Y+PDTN+ LHDVDEEVK G LY+HSEKLAIAFGLI  P  T IRI KNLRVCGDCH+F K
Sbjct: 495 YIPDTNFELHDVDEEVKVGNLYSHSEKLAIAFGLIATPEGTHIRIMKNLRVCGDCHSFIK 554

Query: 602 FVSSIERRTIILRDANRFHHFKEGACSCRDYW 634
            VS+I RR II+RDANRFHHF+ GACSCRDYW
Sbjct: 555 HVSAITRRVIIVRDANRFHHFEGGACSCRDYW 586

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP147_ARATH5.8e-13640.85Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
PPR21_ARATH1.7e-13539.63Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop... [more]
PP296_ARATH1.4e-13441.71Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... [more]
PP348_ARATH7.1e-13440.31Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... [more]
PP265_ARATH3.5e-13337.60Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LE23_CUCSA3.0e-29678.99Uncharacterized protein OS=Cucumis sativus GN=Csa_3G777570 PE=4 SV=1[more]
V4T1L8_9ROSI1.9e-25572.90Uncharacterized protein OS=Citrus clementina GN=CICLE_v10013825mg PE=4 SV=1[more]
A5C1S9_VITVI4.9e-25173.57Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014227 PE=4 SV=1[more]
A0A0D2MF68_GOSRA3.9e-24865.52Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_002G238700 PE=... [more]
I1JGM4_SOYBN8.2e-24671.65Uncharacterized protein OS=Glycine max GN=GLYMA_02G201800 PE=4 SV=2[more]
Match NameE-valueIdentityDescription
AT2G03880.13.3e-13740.85 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G08070.19.5e-13739.63 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G33990.14.0e-13540.31 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT3G46790.12.0e-13437.60 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT2G33760.15.8e-13441.18 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|659084389|ref|XP_008442861.1|1.3e-30882.15PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Cucumis m... [more]
gi|449462994|ref|XP_004149219.1|4.2e-29678.99PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Cucumis s... [more]
gi|731400928|ref|XP_010654106.1|7.6e-26169.49PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Vitis vin... [more]
gi|985453519|ref|XP_015386876.1|1.2e-25567.93PREDICTED: pentatricopeptide repeat-containing protein At2g33760-like [Citrus si... [more]
gi|567875143|ref|XP_006430161.1|2.8e-25572.90hypothetical protein CICLE_v10013825mg [Citrus clementina][more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
CmoCh06G004880CmoCh06G004880gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
CmoCh06G004880.1CmoCh06G004880.1-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G004880.1.exon.1CmoCh06G004880.1.exon.1exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
CmoCh06G004880.1.CDS.1CmoCh06G004880.1.CDS.1CDS


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 200..225
score: 0.03coord: 126..155
score: 0.0033coord: 227..257
score: 0.0018coord: 99..123
score: 0
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 393..425
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 325..372
score: 1.
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 300..326
score: 8.5E-5coord: 227..260
score: 1.5E-5coord: 197..226
score: 5.8E-4coord: 328..361
score: 2.4E-5coord: 401..425
score: 2.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 429..459
score: 5.393coord: 361..396
score: 8.758coord: 225..259
score: 10.939coord: 295..325
score: 8.714coord: 93..123
score: 7.98coord: 463..497
score: 7.202coord: 124..158
score: 9.525coord: 194..224
score: 8.835coord: 260..294
score: 6.127coord: 397..427
score: 9.372coord: 326..360
score: 11
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 98..141
score: 9.7E-7coord: 197..228
score: 9.7E-7coord: 398..483
score: 9.
IPR011990Tetratricopeptide-like helical domainunknownSSF48452TPR-likecoord: 104..464
score: 6.4
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 65..504
score: 2.6E